RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 POLLQ9UGP5 575 aa8.86□□□□□ -0.99
PCDHB1-201ENST00000306549 ZBTB12Q9Y330 459 aaPredicted RBP8.86□□□□□ -0.99
PCDHB1-201ENST00000306549 POTEB3A0JP26 581 aa8.86□□□□□ -0.99
PCDHB1-201ENST00000306549 RAB27AP51159 221 aa8.86□□□□□ -0.99
PCDHB1-201ENST00000306549 GRIN1Q05586 938 aa8.86□□□□□ -0.99
PCDHB1-201ENST00000306549 ADCK5Q3MIX3 580 aa8.86□□□□□ -0.99
PCDHB1-201ENST00000306549 CC2D1AQ6P1N0 951 aaPredicted RBP8.86□□□□□ -0.99
PCDHB1-201ENST00000306549 POTEBQ6S5H4 581 aa8.86□□□□□ -0.99
PCDHB1-201ENST00000306549 TRIM67Q6ZTA4 783 aa8.86□□□□□ -0.99
PCDHB1-201ENST00000306549 ARHGAP18Q8N392 663 aa8.86□□□□□ -0.99
PCDHB1-201ENST00000306549 STAG2Q8N3U4 1231 aa8.86□□□□□ -0.99
PCDHB1-201ENST00000306549 STX19Q8N4C7 294 aa8.86□□□□□ -0.99
PCDHB1-201ENST00000306549 MTBPQ96DY7 904 aa8.86□□□□□ -0.99
PCDHB1-201ENST00000306549 PAWRQ96IZ0 340 aaKnown RBP8.86□□□□□ -0.99
PCDHB1-201ENST00000306549 BLZF1Q9H2G9 400 aa8.86□□□□□ -0.99
PCDHB1-201ENST00000306549 CHCHD3Q9NX63 227 aaKnown RBP8.86□□□□□ -0.99
PCDHB1-201ENST00000306549 OGFRQ9NZT2 677 aa8.86□□□□□ -0.99
PCDHB1-201ENST00000306549 LUC7L3O95232 432 aaKnown RBP8.86□□□□□ -0.99
PCDHB1-201ENST00000306549 GGPS1O95749 300 aa8.86□□□□□ -0.99
PCDHB1-201ENST00000306549 CXCL9Q07325 125 aa8.86□□□□□ -0.99
PCDHB1-201ENST00000306549 E4F1Q66K89 784 aaPredicted RBP8.86□□□□□ -0.99
PCDHB1-201ENST00000306549 SWSAP1Q6NVH7 229 aa8.86□□□□□ -0.99
PCDHB1-201ENST00000306549 NIPA1Q7RTP0 329 aa8.86□□□□□ -0.99
PCDHB1-201ENST00000306549 SCG3Q8WXD2 468 aaKnown RBP8.86□□□□□ -0.99
PCDHB1-201ENST00000306549 SERPINI1Q99574 410 aa8.86□□□□□ -0.99
PCDHB1-201ENST00000306549 UPF3AQ9H1J1 476 aaKnown RBP8.86□□□□□ -0.99
PCDHB1-201ENST00000306549 COG4Q9H9E3 785 aa8.86□□□□□ -0.99
PCDHB1-201ENST00000306549 LSM7Q9UK45 103 aaKnown RBP8.86□□□□□ -0.99
PCDHB1-201ENST00000306549 STK38LQ9Y2H1 464 aa8.86□□□□□ -0.99
PCDHB1-201ENST00000306549 NEDD4P46934 1319 aa8.86□□□□□ -0.99
PCDHB1-201ENST00000306549 KNOP1Q1ED39 458 aaKnown RBP8.86□□□□□ -0.99
PCDHB1-201ENST00000306549 ALKBH8Q96BT7 664 aaKnown RBP8.86□□□□□ -0.99
PCDHB1-201ENST00000306549 MOV10L1Q9BXT6 1211 aaKnown RBP8.86□□□□□ -0.99
PCDHB1-201ENST00000306549 SERPING1P05155 500 aa8.85□□□□□ -0.99
PCDHB1-201ENST00000306549 VPS41P49754 854 aa8.85□□□□□ -0.99
PCDHB1-201ENST00000306549 COPB1P53618 953 aaKnown RBP8.85□□□□□ -0.99
PCDHB1-201ENST00000306549 SNX1Q13596 522 aa8.85□□□□□ -0.99
PCDHB1-201ENST00000306549 SPOPLQ6IQ16 392 aa8.85□□□□□ -0.99
PCDHB1-201ENST00000306549 KCTD6Q8NC69 237 aa8.85□□□□□ -0.99
PCDHB1-201ENST00000306549 ZSCAN32Q9NX65 697 aa8.85□□□□□ -0.99
PCDHB1-201ENST00000306549 MYH7BA7E2Y1 1941 aa8.85□□□□□ -0.99
PCDHB1-201ENST00000306549 CACNA1SQ13698 1873 aa8.85□□□□□ -0.99
PCDHB1-201ENST00000306549 C17orf102A2RUQ5 167 aa8.85□□□□□ -0.99
PCDHB1-201ENST00000306549 SNX2O60749 519 aa8.85□□□□□ -0.99
PCDHB1-201ENST00000306549 NR3C2P08235 984 aa8.85□□□□□ -0.99
PCDHB1-201ENST00000306549 YY1P25490 414 aa8.85□□□□□ -0.99
PCDHB1-201ENST00000306549 ZC3H12BQ5HYM0 836 aaKnown RBP8.85□□□□□ -0.99
PCDHB1-201ENST00000306549 PCGF5Q86SE9 256 aa8.85□□□□□ -0.99
PCDHB1-201ENST00000306549 UBXN8O00124 270 aa8.85□□□□□ -0.99
PCDHB1-201ENST00000306549 CYP2C19P33261 490 aa8.85□□□□□ -0.99
PCDHB1-201ENST00000306549 CRY2Q49AN0 593 aa8.85□□□□□ -0.99
PCDHB1-201ENST00000306549 ZNF467Q7Z7K2 595 aaPredicted RBP8.85□□□□□ -0.99
PCDHB1-201ENST00000306549 TUBB6Q9BUF5 446 aa8.85□□□□□ -0.99
PCDHB1-201ENST00000306549 CBX8Q9HC52 389 aa8.85□□□□□ -0.99
PCDHB1-201ENST00000306549 FOXP2O15409 715 aa8.85□□□□□ -0.99
PCDHB1-201ENST00000306549 TADA2AO75478 443 aa8.85□□□□□ -0.99
PCDHB1-201ENST00000306549 RBP5P82980 135 aa8.85□□□□□ -0.99
PCDHB1-201ENST00000306549 TTC19Q6DKK2 380 aaPredicted RBP8.85□□□□□ -0.99
PCDHB1-201ENST00000306549 FRMD5Q7Z6J6 570 aa8.85□□□□□ -0.99
PCDHB1-201ENST00000306549 RSPH1Q8WYR4 309 aa8.85□□□□□ -0.99
PCDHB1-201ENST00000306549 TRIM54Q9BYV2 358 aa8.85□□□□□ -0.99
PCDHB1-201ENST00000306549 POLR3FQ9H1D9 316 aaPredicted RBP8.85□□□□□ -0.99
PCDHB1-201ENST00000306549 CYBBP04839 570 aa8.85□□□□□ -0.99
PCDHB1-201ENST00000306549 PLD1Q13393 1074 aa8.85□□□□□ -0.99
PCDHB1-201ENST00000306549 ART3Q13508 389 aa8.85□□□□□ -0.99
PCDHB1-201ENST00000306549 UBE2SQ16763 222 aa8.85□□□□□ -0.99
PCDHB1-201ENST00000306549 TBC1D10CQ8IV04 446 aa8.85□□□□□ -0.99
PCDHB1-201ENST00000306549 RASEFQ8IZ41 740 aa8.85□□□□□ -0.99
PCDHB1-201ENST00000306549 DAGLBQ8NCG7 672 aa8.85□□□□□ -0.99
PCDHB1-201ENST00000306549 UIMC1Q96RL1 719 aa8.85□□□□□ -0.99
PCDHB1-201ENST00000306549 PSMB7Q99436 277 aa8.85□□□□□ -0.99
PCDHB1-201ENST00000306549 DOLKQ9UPQ8 538 aa8.85□□□□□ -0.99
PCDHB1-201ENST00000306549 GTPBP10A4D1E9 387 aaKnown RBP8.85□□□□□ -0.99
PCDHB1-201ENST00000306549 GOLGA8KD6RF30 607 aa8.85□□□□□ -0.99
PCDHB1-201ENST00000306549 SV2CQ496J9 727 aa8.85□□□□□ -0.99
PCDHB1-201ENST00000306549 TAF1BQ53T94 588 aaPredicted RBP8.85□□□□□ -0.99
PCDHB1-201ENST00000306549 RAD54LQ92698 747 aa8.85□□□□□ -0.99
PCDHB1-201ENST00000306549 BPIFA3Q9BQP9 254 aa8.85□□□□□ -0.99
PCDHB1-201ENST00000306549 MXRA8Q9BRK3 442 aa8.85□□□□□ -0.99
PCDHB1-201ENST00000306549 HMX1Q9NP08 348 aaPredicted RBP8.85□□□□□ -0.99
PCDHB1-201ENST00000306549 H3BRJ5 948 aa8.85□□□□□ -0.99
PCDHB1-201ENST00000306549 MEIS1O00470 390 aa8.85□□□□□ -0.99
PCDHB1-201ENST00000306549 CREB3O43889 395 aa8.85□□□□□ -0.99
PCDHB1-201ENST00000306549 GFPT2O94808 682 aa8.85□□□□□ -0.99
PCDHB1-201ENST00000306549 MYO1DO94832 1006 aa8.85□□□□□ -0.99
PCDHB1-201ENST00000306549 MYCP01106 439 aaPredicted RBP8.85□□□□□ -0.99
PCDHB1-201ENST00000306549 KRT7P08729 469 aa8.85□□□□□ -0.99
PCDHB1-201ENST00000306549 ALDH7A1P49419 539 aaKnown RBP8.85□□□□□ -0.99
PCDHB1-201ENST00000306549 CREMQ03060 361 aa8.85□□□□□ -0.99
PCDHB1-201ENST00000306549 DEUP1Q05D60 604 aa8.85□□□□□ -0.99
PCDHB1-201ENST00000306549 BAATQ14032 418 aaPredicted RBP8.85□□□□□ -0.99
PCDHB1-201ENST00000306549 TRIM59Q8IWR1 403 aa8.85□□□□□ -0.99
PCDHB1-201ENST00000306549 SH3KBP1Q96B97 665 aa8.85□□□□□ -0.99
PCDHB1-201ENST00000306549 WDR35Q9P2L0 1181 aa8.85□□□□□ -0.99
PCDHB1-201ENST00000306549 PACSIN2Q9UNF0 486 aaPredicted RBP8.85□□□□□ -0.99
PCDHB1-201ENST00000306549 MYO18AQ92614 2054 aaKnown RBP8.84□□□□□ -0.99
PCDHB1-201ENST00000306549 EVPLQ92817 2033 aa8.84□□□□□ -0.99
PCDHB1-201ENST00000306549 RPS6KA5O75582 802 aa8.84□□□□□ -0.99
PCDHB1-201ENST00000306549 PLEKHA8P1O95397 391 aa8.84□□□□□ -0.99
PCDHB1-201ENST00000306549 MSH2P43246 934 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms