RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 RBM41Q96IZ5 413 aaKnown RBP14.16□□□□□ -0.14
DDX54-201ENST00000306014 YIPF3Q9GZM5 350 aa14.16□□□□□ -0.14
DDX54-201ENST00000306014 PIM2Q9P1W9 311 aa14.16□□□□□ -0.14
DDX54-201ENST00000306014 CAMTA1Q9Y6Y1 1673 aa14.16□□□□□ -0.14
DDX54-201ENST00000306014 TNS2Q63HR2 1409 aa14.16□□□□□ -0.14
DDX54-201ENST00000306014 INO80B-WBP1J3KQ70 363 aa14.15□□□□□ -0.14
DDX54-201ENST00000306014 SCTRP47872 440 aa14.15□□□□□ -0.14
DDX54-201ENST00000306014 SNX16P57768 344 aa14.15□□□□□ -0.14
DDX54-201ENST00000306014 PDE1BQ01064 536 aa14.15□□□□□ -0.14
DDX54-201ENST00000306014 NR1H3Q13133 447 aa14.15□□□□□ -0.14
DDX54-201ENST00000306014 TNFRSF25Q93038 417 aa14.15□□□□□ -0.14
DDX54-201ENST00000306014 LBHD1Q9BQE6 289 aaPredicted RBP14.15□□□□□ -0.14
DDX54-201ENST00000306014 RTFDC1Q9BY42 306 aaPredicted RBP14.15□□□□□ -0.14
DDX54-201ENST00000306014 INO80BQ9C086 356 aaPredicted RBP14.15□□□□□ -0.14
DDX54-201ENST00000306014 GDF3Q9NR23 364 aa14.15□□□□□ -0.14
DDX54-201ENST00000306014 WDR64B1ANS9 1081 aa14.15□□□□□ -0.14
DDX54-201ENST00000306014 MSH4O15457 936 aa14.15□□□□□ -0.14
DDX54-201ENST00000306014 CDH16O75309 829 aa14.15□□□□□ -0.14
DDX54-201ENST00000306014 TNFAIP1Q13829 316 aa14.15□□□□□ -0.14
DDX54-201ENST00000306014 EPC2Q52LR7 807 aa14.15□□□□□ -0.14
DDX54-201ENST00000306014 CPA5Q8WXQ8 436 aa14.15□□□□□ -0.14
DDX54-201ENST00000306014 CFAP36Q96G28 342 aa14.15□□□□□ -0.14
DDX54-201ENST00000306014 RAVER2Q9HCJ3 691 aaKnown RBP14.15□□□□□ -0.14
DDX54-201ENST00000306014 NRBP2Q9NSY0 501 aa14.15□□□□□ -0.14
DDX54-201ENST00000306014 AKAP12Q02952 1782 aa14.15□□□□□ -0.14
DDX54-201ENST00000306014 RPS6KA5O75582 802 aa14.15□□□□□ -0.14
DDX54-201ENST00000306014 ATP5HO75947 161 aa14.15□□□□□ -0.14
DDX54-201ENST00000306014 PSMA2P25787 234 aa14.15□□□□□ -0.14
DDX54-201ENST00000306014 ZNF844Q08AG5 666 aa14.15□□□□□ -0.14
DDX54-201ENST00000306014 DPY19L2Q6NUT2 758 aa14.15□□□□□ -0.14
DDX54-201ENST00000306014 RTKN2Q8IZC4 609 aa14.15□□□□□ -0.14
DDX54-201ENST00000306014 BTBD6Q96KE9 485 aa14.15□□□□□ -0.14
DDX54-201ENST00000306014 RBM15Q96T37 977 aaKnown RBP eCLIP14.15□□□□□ -0.14
DDX54-201ENST00000306014 MKNK1Q9BUB5 465 aa14.15□□□□□ -0.14
DDX54-201ENST00000306014 AGPAT3Q9NRZ7 376 aa14.15□□□□□ -0.14
DDX54-201ENST00000306014 DDX20Q9UHI6 824 aaKnown RBP14.15□□□□□ -0.14
DDX54-201ENST00000306014 SCOCQ9UIL1 159 aa14.15□□□□□ -0.14
DDX54-201ENST00000306014 BCL9O00512 1426 aa14.15□□□□□ -0.14
DDX54-201ENST00000306014 RAD23BP54727 409 aa14.15□□□□□ -0.14
DDX54-201ENST00000306014 ARL4CP56559 192 aa14.15□□□□□ -0.14
DDX54-201ENST00000306014 SKOR1P84550 965 aa14.15□□□□□ -0.14
DDX54-201ENST00000306014 TRAIPQ9BWF2 469 aa14.15□□□□□ -0.14
DDX54-201ENST00000306014 ALG13Q9NP73 1137 aaKnown RBP14.15□□□□□ -0.14
DDX54-201ENST00000306014 PRR12Q9ULL5 1215 aa14.15□□□□□ -0.14
DDX54-201ENST00000306014 TACC3Q9Y6A5 838 aa14.15□□□□□ -0.14
DDX54-201ENST00000306014 ATRNO75882 1429 aa14.14□□□□□ -0.15
DDX54-201ENST00000306014 CPP00450 1065 aa14.14□□□□□ -0.15
DDX54-201ENST00000306014 ITIH2P19823 946 aa14.14□□□□□ -0.15
DDX54-201ENST00000306014 POLE2P56282 527 aa14.14□□□□□ -0.15
DDX54-201ENST00000306014 GEN1Q17RS7 908 aa14.14□□□□□ -0.15
DDX54-201ENST00000306014 C4orf33Q8N1A6 199 aa14.14□□□□□ -0.15
DDX54-201ENST00000306014 NUDCD1Q96RS6 583 aa14.14□□□□□ -0.15
DDX54-201ENST00000306014 CYTH2Q99418 400 aa14.14□□□□□ -0.15
DDX54-201ENST00000306014 TRIM4Q9C037 500 aa14.14□□□□□ -0.15
DDX54-201ENST00000306014 UVRAGQ9P2Y5 699 aa14.14□□□□□ -0.15
DDX54-201ENST00000306014 GNA15P30679 374 aa14.14□□□□□ -0.15
DDX54-201ENST00000306014 ARSEP51690 589 aa14.14□□□□□ -0.15
DDX54-201ENST00000306014 SLC20A2Q08357 652 aa14.14□□□□□ -0.15
DDX54-201ENST00000306014 NOD2Q9HC29 1040 aa14.14□□□□□ -0.15
DDX54-201ENST00000306014 TBC1D22BQ9NU19 505 aa14.14□□□□□ -0.15
DDX54-201ENST00000306014 SEPT10Q9P0V9 454 aa14.14□□□□□ -0.15
DDX54-201ENST00000306014 NYAP2Q9P242 653 aa14.14□□□□□ -0.15
DDX54-201ENST00000306014 CFAP69A5D8W1 941 aa14.14□□□□□ -0.15
DDX54-201ENST00000306014 COILP38432 576 aaPredicted RBP14.14□□□□□ -0.15
DDX54-201ENST00000306014 PPP1R2P3Q6NXS1 205 aa14.14□□□□□ -0.15
DDX54-201ENST00000306014 SLC30A10Q6XR72 485 aa14.14□□□□□ -0.15
DDX54-201ENST00000306014 DEFB132Q7Z7B7 95 aa14.14□□□□□ -0.15
DDX54-201ENST00000306014 LDHDQ86WU2 507 aa14.14□□□□□ -0.15
DDX54-201ENST00000306014 HSPH1Q92598 858 aa14.14□□□□□ -0.15
DDX54-201ENST00000306014 TTC25Q96NG3 672 aa14.14□□□□□ -0.15
DDX54-201ENST00000306014 TMEM117Q9H0C3 514 aa14.14□□□□□ -0.15
DDX54-201ENST00000306014 PPARGC1AQ9UBK2 798 aaKnown RBP14.14□□□□□ -0.15
DDX54-201ENST00000306014 IQANK1A0A1B0GTG1 560 aa14.13□□□□□ -0.15
DDX54-201ENST00000306014 F8VZ95 297 aa14.13□□□□□ -0.15
DDX54-201ENST00000306014 GOLGA8RI6L899 631 aa14.13□□□□□ -0.15
DDX54-201ENST00000306014 TULP2O00295 520 aa14.13□□□□□ -0.15
DDX54-201ENST00000306014 EIF3DO15371 548 aaKnown RBP eCLIP14.13□□□□□ -0.15
DDX54-201ENST00000306014 TOM1L1O75674 476 aa14.13□□□□□ -0.15
DDX54-201ENST00000306014 PSAPP07602 524 aa14.13□□□□□ -0.15
DDX54-201ENST00000306014 SAT1P21673 171 aa14.13□□□□□ -0.15
DDX54-201ENST00000306014 STAT4Q14765 748 aa14.13□□□□□ -0.15
DDX54-201ENST00000306014 ZC3H18Q86VM9 953 aaKnown RBP14.13□□□□□ -0.15
DDX54-201ENST00000306014 SLC13A5Q86YT5 568 aaPredicted RBP14.13□□□□□ -0.15
DDX54-201ENST00000306014 RNF34Q969K3 372 aa14.13□□□□□ -0.15
DDX54-201ENST00000306014 PAGR1Q9BTK6 254 aa14.13□□□□□ -0.15
DDX54-201ENST00000306014 TRABDQ9H4I3 376 aa14.13□□□□□ -0.15
DDX54-201ENST00000306014 IGF2BP3O00425 579 aaKnown RBP eCLIP14.13□□□□□ -0.15
DDX54-201ENST00000306014 JAK3P52333 1124 aa14.13□□□□□ -0.15
DDX54-201ENST00000306014 SLC10A5Q5PT55 438 aa14.13□□□□□ -0.15
DDX54-201ENST00000306014 MIS18BP1Q6P0N0 1132 aa14.13□□□□□ -0.15
DDX54-201ENST00000306014 LRRC55Q6ZSA7 311 aa14.13□□□□□ -0.15
DDX54-201ENST00000306014 TMEM35BQ8NCS4 154 aa14.13□□□□□ -0.15
DDX54-201ENST00000306014 SMC1BQ8NDV3 1235 aa14.13□□□□□ -0.15
DDX54-201ENST00000306014 ERP27Q96DN0 273 aa14.13□□□□□ -0.15
DDX54-201ENST00000306014 ZSWIM1Q9BR11 485 aa14.13□□□□□ -0.15
DDX54-201ENST00000306014 SEMA4AQ9H3S1 761 aa14.13□□□□□ -0.15
DDX54-201ENST00000306014 HESX1Q9UBX0 185 aa14.13□□□□□ -0.15
DDX54-201ENST00000306014 SYNJ2BP-COX16A0A087WUM0 186 aa14.13□□□□□ -0.15
DDX54-201ENST00000306014 ECE2O60344 883 aa14.13□□□□□ -0.15
DDX54-201ENST00000306014 ASNSP08243 561 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms