RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 ACRP10323 421 aa29.64■■■□□ 2.34
HDAC3-201ENST00000305264 FPGSQ05932 587 aa29.64■■■□□ 2.34
HDAC3-201ENST00000305264 RTN4RL1Q86UN2 441 aaPredicted RBP29.64■■■□□ 2.34
HDAC3-201ENST00000305264 FAM189A1O60320 539 aa29.63■■■□□ 2.33
HDAC3-201ENST00000305264 NFIL3Q16649 462 aa29.63■■■□□ 2.33
HDAC3-201ENST00000305264 SEZ6Q53EL9 994 aa29.63■■■□□ 2.33
HDAC3-201ENST00000305264 ZBTB41Q5SVQ8 909 aa29.63■■■□□ 2.33
HDAC3-201ENST00000305264 CNKSR3Q6P9H4 555 aa29.63■■■□□ 2.33
HDAC3-201ENST00000305264 LRRC55Q6ZSA7 311 aa29.63■■■□□ 2.33
HDAC3-201ENST00000305264 FTHL17Q9BXU8 183 aa29.63■■■□□ 2.33
HDAC3-201ENST00000305264 DMAC2Q9NW81 257 aa29.63■■■□□ 2.33
HDAC3-201ENST00000305264 AGO2Q9UKV8 859 aaKnown RBP29.63■■■□□ 2.33
HDAC3-201ENST00000305264 MCF2P10911 925 aa29.63■■■□□ 2.33
HDAC3-201ENST00000305264 DCAF4L1Q3SXM0 396 aa29.63■■■□□ 2.33
HDAC3-201ENST00000305264 FOXR2Q6PJQ5 311 aa29.63■■■□□ 2.33
HDAC3-201ENST00000305264 AOPEPQ8N6M6 819 aa29.63■■■□□ 2.33
HDAC3-201ENST00000305264 BPIFA3Q9BQP9 254 aa29.63■■■□□ 2.33
HDAC3-201ENST00000305264 IL23AQ9NPF7 189 aa29.63■■■□□ 2.33
HDAC3-201ENST00000305264 GOLGA8IPA6NC78 632 aa29.62■■■□□ 2.33
HDAC3-201ENST00000305264 GOLGA8JA6NMD2 632 aa29.62■■■□□ 2.33
HDAC3-201ENST00000305264 SLC9A9Q8IVB4 645 aa29.62■■■□□ 2.33
HDAC3-201ENST00000305264 ZC3H3Q8IXZ2 948 aaKnown RBP29.62■■■□□ 2.33
HDAC3-201ENST00000305264 CSGALNACT2Q8N6G5 542 aa29.62■■■□□ 2.33
HDAC3-201ENST00000305264 ANP32EQ9BTT0 268 aa29.62■■■□□ 2.33
HDAC3-201ENST00000305264 TRIM6Q9C030 488 aaPredicted RBP29.62■■■□□ 2.33
HDAC3-201ENST00000305264 TSPYL2Q9H2G4 693 aaPredicted RBP29.62■■■□□ 2.33
HDAC3-201ENST00000305264 FAM105AQ9NUU6 356 aa29.62■■■□□ 2.33
HDAC3-201ENST00000305264 CAPN15O75808 1086 aa29.61■■■□□ 2.33
HDAC3-201ENST00000305264 PPIGQ13427 754 aaKnown RBP eCLIP29.61■■■□□ 2.333e-6■■□□□ 12.7
HDAC3-201ENST00000305264 ADAM9Q13443 819 aa29.61■■■□□ 2.33
HDAC3-201ENST00000305264 THNSL1Q8IYQ7 743 aa29.61■■■□□ 2.33
HDAC3-201ENST00000305264 RPUSD2Q8IZ73 545 aaKnown RBP29.61■■■□□ 2.33
HDAC3-201ENST00000305264 ENOX1Q8TC92 643 aaKnown RBP29.61■■■□□ 2.33
HDAC3-201ENST00000305264 NOC3LQ8WTT2 800 aaKnown RBP29.61■■■□□ 2.33
HDAC3-201ENST00000305264 TMEM174Q8WUU8 243 aa29.61■■■□□ 2.33
HDAC3-201ENST00000305264 NXF3Q9H4D5 531 aaKnown RBP29.61■■■□□ 2.33
HDAC3-201ENST00000305264 CBX8Q9HC52 389 aa29.61■■■□□ 2.33
HDAC3-201ENST00000305264 RGS18Q9NS28 235 aa29.61■■■□□ 2.33
HDAC3-201ENST00000305264 HES2Q9Y543 173 aa29.61■■■□□ 2.33
HDAC3-201ENST00000305264 NR2E3Q9Y5X4 410 aa29.61■■■□□ 2.33
HDAC3-201ENST00000305264 EPHB4P54760 987 aa29.61■■■□□ 2.33
HDAC3-201ENST00000305264 FKBP3Q00688 224 aaKnown RBP29.61■■■□□ 2.33
HDAC3-201ENST00000305264 C16orf59Q7L2K0 433 aa29.61■■■□□ 2.33
HDAC3-201ENST00000305264 DHX40Q8IX18 779 aaKnown RBP29.61■■■□□ 2.33
HDAC3-201ENST00000305264 PCDHB2Q9Y5E7 798 aa29.61■■■□□ 2.33
HDAC3-201ENST00000305264 OGTO15294 1046 aa29.6■■■□□ 2.33
HDAC3-201ENST00000305264 PFKMP08237 780 aa29.6■■■□□ 2.33
HDAC3-201ENST00000305264 CASP4P49662 377 aa29.6■■■□□ 2.33
HDAC3-201ENST00000305264 ACOT2P49753 483 aa29.6■■■□□ 2.33
HDAC3-201ENST00000305264 OSTNP61366 133 aa29.6■■■□□ 2.33
HDAC3-201ENST00000305264 MYL5Q02045 173 aa29.6■■■□□ 2.33
HDAC3-201ENST00000305264 TMEM192Q8IY95 271 aa29.6■■■□□ 2.33
HDAC3-201ENST00000305264 XXYLT1Q8NBI6 393 aa29.6■■■□□ 2.33
HDAC3-201ENST00000305264 SMG8Q8ND04 991 aaKnown RBP29.6■■■□□ 2.33
HDAC3-201ENST00000305264 FAM213AQ9BRX8 229 aa29.6■■■□□ 2.33
HDAC3-201ENST00000305264 TRAIPQ9BWF2 469 aa29.6■■■□□ 2.33
HDAC3-201ENST00000305264 IPPQ9Y573 584 aa29.6■■■□□ 2.33
HDAC3-201ENST00000305264 IBSPP21815 317 aaPredicted RBP29.59■■■□□ 2.33
HDAC3-201ENST00000305264 RPL13P26373 211 aaKnown RBP29.59■■■□□ 2.33
HDAC3-201ENST00000305264 TNFSF9P41273 254 aa29.59■■■□□ 2.33
HDAC3-201ENST00000305264 NCAPHQ15003 741 aa29.59■■■□□ 2.33
HDAC3-201ENST00000305264 IQCB1Q15051 598 aa29.59■■■□□ 2.33
HDAC3-201ENST00000305264 GPD1LQ8N335 351 aa29.59■■■□□ 2.33
HDAC3-201ENST00000305264 NFE2L3Q9Y4A8 694 aa29.59■■■□□ 2.33
HDAC3-201ENST00000305264 EXOC3O60645 756 aa29.59■■■□□ 2.33
HDAC3-201ENST00000305264 CAVIN2O95810 425 aa29.59■■■□□ 2.33
HDAC3-201ENST00000305264 MYBPC2Q14324 1141 aa29.59■■■□□ 2.33
HDAC3-201ENST00000305264 SPATA1Q5VX52 437 aa29.59■■■□□ 2.33
HDAC3-201ENST00000305264 CEP135Q66GS9 1140 aa29.59■■■□□ 2.33
HDAC3-201ENST00000305264 CRELD2Q6UXH1 353 aaPredicted RBP29.59■■■□□ 2.33
HDAC3-201ENST00000305264 APBB1IPQ7Z5R6 666 aaPredicted RBP29.59■■■□□ 2.33
HDAC3-201ENST00000305264 FAM200AQ8TCP9 573 aa29.59■■■□□ 2.33
HDAC3-201ENST00000305264 SRRTQ9BXP5 876 aaKnown RBP29.59■■■□□ 2.33
HDAC3-201ENST00000305264 LOC101059915A0A1B0GWI6 518 aaPredicted RBP29.58■■■□□ 2.33
HDAC3-201ENST00000305264 C9IYK1 514 aa29.58■■■□□ 2.33
HDAC3-201ENST00000305264 ENPP3O14638 875 aa29.58■■■□□ 2.33
HDAC3-201ENST00000305264 AKAP3O75969 853 aa29.58■■■□□ 2.33
HDAC3-201ENST00000305264 GAS2L3Q86XJ1 694 aa29.58■■■□□ 2.33
HDAC3-201ENST00000305264 CBWD2Q8IUF1 395 aa29.58■■■□□ 2.33
HDAC3-201ENST00000305264 FBXL18Q96ME1 805 aa29.58■■■□□ 2.33
HDAC3-201ENST00000305264 LBHD1Q9BQE6 289 aaPredicted RBP29.58■■■□□ 2.33
HDAC3-201ENST00000305264 A0A0U1RQF3 1178 aa29.57■■■□□ 2.32
HDAC3-201ENST00000305264 KIAA0391O15091 583 aaKnown RBP29.57■■■□□ 2.32
HDAC3-201ENST00000305264 CETN3O15182 167 aa29.57■■■□□ 2.32
HDAC3-201ENST00000305264 EXTL3O43909 919 aa29.57■■■□□ 2.32
HDAC3-201ENST00000305264 ATF7P17544 494 aaPredicted RBP29.57■■■□□ 2.32
HDAC3-201ENST00000305264 IKBKEQ14164 716 aa29.57■■■□□ 2.32
HDAC3-201ENST00000305264 TPD52L1Q16890 204 aaPredicted RBP29.57■■■□□ 2.32
HDAC3-201ENST00000305264 SLC24A5Q71RS6 500 aa29.57■■■□□ 2.32
HDAC3-201ENST00000305264 LUZP1Q86V48 1076 aa29.57■■■□□ 2.32
HDAC3-201ENST00000305264 RDH13Q8NBN7 331 aa29.57■■■□□ 2.32
HDAC3-201ENST00000305264 APOL6Q9BWW8 343 aa29.57■■■□□ 2.32
HDAC3-201ENST00000305264 CITO14578 2027 aa29.57■■■□□ 2.32
HDAC3-201ENST00000305264 ADRB2P07550 413 aa29.57■■■□□ 2.32
HDAC3-201ENST00000305264 STAG3L1P0CL83 205 aa29.57■■■□□ 2.32
HDAC3-201ENST00000305264 GRM5P41594 1212 aa29.57■■■□□ 2.32
HDAC3-201ENST00000305264 RAB27AP51159 221 aa29.57■■■□□ 2.32
HDAC3-201ENST00000305264 RNF39Q9H2S5 420 aa29.57■■■□□ 2.32
HDAC3-201ENST00000305264 SNTG2Q9NY99 539 aa29.57■■■□□ 2.32
HDAC3-201ENST00000305264 TTC3P53804 2025 aa29.56■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms