RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 H0Y626 953 aa8.28□□□□□ -1.08
SCN9A-201ENST00000303354 CDH6P55285 790 aa8.28□□□□□ -1.08
SCN9A-201ENST00000303354 GLE1Q53GS7 698 aaKnown RBP8.28□□□□□ -1.08
SCN9A-201ENST00000303354 ANKRD13AQ8IZ07 590 aa8.28□□□□□ -1.08
SCN9A-201ENST00000303354 PNKPQ96T60 521 aa8.28□□□□□ -1.08
SCN9A-201ENST00000303354 MFSD1Q9H3U5 465 aa8.28□□□□□ -1.08
SCN9A-201ENST00000303354 XAB2Q9HCS7 855 aaKnown RBP8.28□□□□□ -1.08
SCN9A-201ENST00000303354 A0A0G2JND7 137 aa8.28□□□□□ -1.08
SCN9A-201ENST00000303354 AP3B2Q13367 1082 aa8.28□□□□□ -1.08
SCN9A-201ENST00000303354 GTF2H3Q13889 308 aa8.28□□□□□ -1.08
SCN9A-201ENST00000303354 HAUS6Q7Z4H7 955 aa8.28□□□□□ -1.08
SCN9A-201ENST00000303354 GGT7Q9UJ14 662 aa8.28□□□□□ -1.08
SCN9A-201ENST00000303354 KDM6BO15054 1643 aa8.28□□□□□ -1.08
SCN9A-201ENST00000303354 MZF1P28698 734 aaPredicted RBP8.28□□□□□ -1.08
SCN9A-201ENST00000303354 RESTQ13127 1097 aa8.28□□□□□ -1.08
SCN9A-201ENST00000303354 E2F5Q15329 346 aa8.28□□□□□ -1.08
SCN9A-201ENST00000303354 KLC3Q6P597 504 aa8.28□□□□□ -1.08
SCN9A-201ENST00000303354 TAGAPQ8N103 731 aa8.28□□□□□ -1.08
SCN9A-201ENST00000303354 PPP2R3CQ969Q6 453 aa8.28□□□□□ -1.08
SCN9A-201ENST00000303354 TRIM11Q96F44 468 aa8.28□□□□□ -1.08
SCN9A-201ENST00000303354 CCDC138Q96M89 665 aa8.28□□□□□ -1.08
SCN9A-201ENST00000303354 CAPS2Q9BXY5 557 aa8.28□□□□□ -1.08
SCN9A-201ENST00000303354 TPX2Q9ULW0 747 aaKnown RBP8.28□□□□□ -1.08
SCN9A-201ENST00000303354 KCNN4O15554 427 aa8.28□□□□□ -1.08
SCN9A-201ENST00000303354 CCT5P48643 541 aa8.28□□□□□ -1.08
SCN9A-201ENST00000303354 TPI1P60174 286 aa8.28□□□□□ -1.08
SCN9A-201ENST00000303354 DGKDQ16760 1214 aa8.28□□□□□ -1.08
SCN9A-201ENST00000303354 HEATR6Q6AI08 1181 aaKnown RBP8.28□□□□□ -1.08
SCN9A-201ENST00000303354 TOGARAM2Q6ZUX3 1019 aa8.28□□□□□ -1.08
SCN9A-201ENST00000303354 MCPH1Q8NEM0 835 aa8.28□□□□□ -1.08
SCN9A-201ENST00000303354 BTN2A2Q8WVV5 523 aa8.28□□□□□ -1.08
SCN9A-201ENST00000303354 GSDMAQ96QA5 445 aa8.28□□□□□ -1.08
SCN9A-201ENST00000303354 KATNAL1Q9BW62 490 aa8.28□□□□□ -1.08
SCN9A-201ENST00000303354 FHDC1Q9C0D6 1143 aaPredicted RBP8.28□□□□□ -1.08
SCN9A-201ENST00000303354 NAGPAQ9UK23 515 aa8.28□□□□□ -1.08
SCN9A-201ENST00000303354 KDM5AP29375 1690 aaKnown RBP8.28□□□□□ -1.08
SCN9A-201ENST00000303354 ZNF853P0CG23 659 aa8.28□□□□□ -1.08
SCN9A-201ENST00000303354 GRM4Q14833 912 aa8.28□□□□□ -1.08
SCN9A-201ENST00000303354 FAM47EQ6ZV65 393 aa8.28□□□□□ -1.08
SCN9A-201ENST00000303354 ZNF564Q8TBZ8 553 aaPredicted RBP8.28□□□□□ -1.08
SCN9A-201ENST00000303354 BCAS4Q8TDM0 211 aa8.28□□□□□ -1.08
SCN9A-201ENST00000303354 AIPL1Q9NZN9 384 aa8.28□□□□□ -1.08
SCN9A-201ENST00000303354 CPSF2Q9P2I0 782 aaKnown RBP8.28□□□□□ -1.08
SCN9A-201ENST00000303354 OVOS2A0A0G2JMS6 1433 aa8.28□□□□□ -1.08
SCN9A-201ENST00000303354 OVOS2A0A0J9YW53 1432 aa8.28□□□□□ -1.08
SCN9A-201ENST00000303354 OVOS2Q6IE36 1432 aa8.28□□□□□ -1.08
SCN9A-201ENST00000303354 ANKARQ7Z5J8 1434 aa8.28□□□□□ -1.08
SCN9A-201ENST00000303354 TJP3O95049 919 aa8.27□□□□□ -1.08
SCN9A-201ENST00000303354 KNOP1Q1ED39 458 aaKnown RBP8.27□□□□□ -1.08
SCN9A-201ENST00000303354 TMEM35BQ8NCS4 154 aa8.27□□□□□ -1.08
SCN9A-201ENST00000303354 SHCBP1LQ9BZQ2 653 aa8.27□□□□□ -1.08
SCN9A-201ENST00000303354 EPC1Q9H2F5 836 aa8.27□□□□□ -1.08
SCN9A-201ENST00000303354 LSM7Q9UK45 103 aaKnown RBP8.27□□□□□ -1.08
SCN9A-201ENST00000303354 ATMINO43313 823 aaPredicted RBP8.27□□□□□ -1.08
SCN9A-201ENST00000303354 CAMTA2O94983 1202 aa8.27□□□□□ -1.08
SCN9A-201ENST00000303354 ITGB3P05106 788 aa8.27□□□□□ -1.08
SCN9A-201ENST00000303354 DDX5P17844 614 aaKnown RBP8.27□□□□□ -1.08
SCN9A-201ENST00000303354 CCL23P55773 120 aa8.27□□□□□ -1.08
SCN9A-201ENST00000303354 GOLGA7BQ2TAP0 167 aa8.27□□□□□ -1.08
SCN9A-201ENST00000303354 POLLQ9UGP5 575 aa8.27□□□□□ -1.08
SCN9A-201ENST00000303354 NFU1Q9UMS0 254 aa8.27□□□□□ -1.08
SCN9A-201ENST00000303354 CFAP43Q8NDM7 1665 aa8.27□□□□□ -1.09
SCN9A-201ENST00000303354 CLCN3P51790 818 aa8.27□□□□□ -1.09
SCN9A-201ENST00000303354 RWDD2BP57060 319 aa8.27□□□□□ -1.09
SCN9A-201ENST00000303354 PRKCEQ02156 737 aa8.27□□□□□ -1.09
SCN9A-201ENST00000303354 IFT88Q13099 833 aa8.27□□□□□ -1.09
SCN9A-201ENST00000303354 WHAMMP3Q1A5X7 153 aa8.27□□□□□ -1.09
SCN9A-201ENST00000303354 POM121L1PQ3SYA9 428 aa8.27□□□□□ -1.09
SCN9A-201ENST00000303354 FASTKD1Q53R41 847 aaKnown RBP8.27□□□□□ -1.09
SCN9A-201ENST00000303354 NUDT18Q6ZVK8 323 aa8.27□□□□□ -1.09
SCN9A-201ENST00000303354 MIB1Q86YT6 1006 aa8.27□□□□□ -1.09
SCN9A-201ENST00000303354 UNC45AQ9H3U1 944 aa8.27□□□□□ -1.09
SCN9A-201ENST00000303354 GPRC5CQ9NQ84 441 aa8.27□□□□□ -1.09
SCN9A-201ENST00000303354 SLC25A13Q9UJS0 675 aa8.27□□□□□ -1.09
SCN9A-201ENST00000303354 PDHXO00330 501 aa8.27□□□□□ -1.09
SCN9A-201ENST00000303354 CLCN1P35523 988 aa8.27□□□□□ -1.09
SCN9A-201ENST00000303354 PPARGP37231 505 aaPredicted RBP8.27□□□□□ -1.09
SCN9A-201ENST00000303354 PAPOLAP51003 745 aaKnown RBP8.27□□□□□ -1.09
SCN9A-201ENST00000303354 IL9RQ01113 521 aa8.27□□□□□ -1.09
SCN9A-201ENST00000303354 GLB1LQ6UWU2 654 aa8.27□□□□□ -1.09
SCN9A-201ENST00000303354 RASGRP2Q7LDG7 609 aa8.27□□□□□ -1.09
SCN9A-201ENST00000303354 RBM41Q96IZ5 413 aaKnown RBP8.27□□□□□ -1.09
SCN9A-201ENST00000303354 HOMER3Q9NSC5 361 aa8.27□□□□□ -1.09
SCN9A-201ENST00000303354 CRB1P82279 1406 aa8.27□□□□□ -1.09
SCN9A-201ENST00000303354 MBL2P11226 248 aaPredicted RBP8.27□□□□□ -1.09
SCN9A-201ENST00000303354 TCP1P17987 556 aaKnown RBP8.27□□□□□ -1.09
SCN9A-201ENST00000303354 CCDC51Q96ER9 411 aa8.27□□□□□ -1.09
SCN9A-201ENST00000303354 TBKBP1A7MCY6 615 aa8.27□□□□□ -1.09
SCN9A-201ENST00000303354 GPS1Q13098 491 aa8.27□□□□□ -1.09
SCN9A-201ENST00000303354 TMC7Q7Z402 723 aa8.27□□□□□ -1.09
SCN9A-201ENST00000303354 KLC2Q9H0B6 622 aa8.27□□□□□ -1.09
SCN9A-201ENST00000303354 HAUS4Q9H6D7 363 aa8.27□□□□□ -1.09
SCN9A-201ENST00000303354 BARHL2Q9NY43 387 aa8.27□□□□□ -1.09
SCN9A-201ENST00000303354 CHEK2O96017 543 aa8.27□□□□□ -1.09
SCN9A-201ENST00000303354 NR3C2P08235 984 aa8.27□□□□□ -1.09
SCN9A-201ENST00000303354 AVPR1AP37288 418 aa8.27□□□□□ -1.09
SCN9A-201ENST00000303354 DCAF6Q58WW2 860 aa8.27□□□□□ -1.09
SCN9A-201ENST00000303354 TRIM48Q8IWZ4 208 aa8.27□□□□□ -1.09
SCN9A-201ENST00000303354 C6orf203Q9P0P8 240 aaPredicted RBP8.27□□□□□ -1.09
SCN9A-201ENST00000303354 TECPR2O15040 1411 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms