RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 DEFB128Q7Z7B8 93 aa10.38□□□□□ -0.75
RFX3-201ENST00000302303 SYCP3Q8IZU3 236 aa10.38□□□□□ -0.75
RFX3-201ENST00000302303 PLEKHO2Q8TD55 490 aa10.38□□□□□ -0.75
RFX3-201ENST00000302303 ADAM2Q99965 735 aa10.38□□□□□ -0.75
RFX3-201ENST00000302303 HTATIP2Q9BUP3 242 aa10.38□□□□□ -0.75
RFX3-201ENST00000302303 RGS18Q9NS28 235 aa10.38□□□□□ -0.75
RFX3-201ENST00000302303 SAMSN1Q9NSI8 373 aaKnown RBP10.38□□□□□ -0.75
RFX3-201ENST00000302303 HSPBP1Q9NZL4 362 aa10.38□□□□□ -0.75
RFX3-201ENST00000302303 EXOC7Q9UPT5 735 aa10.38□□□□□ -0.75
RFX3-201ENST00000302303 PIN4Q9Y237 131 aaKnown RBP10.38□□□□□ -0.75
RFX3-201ENST00000302303 A0A0U1RQF3 1178 aa10.37□□□□□ -0.75
RFX3-201ENST00000302303 CLDN3O15551 220 aa10.37□□□□□ -0.75
RFX3-201ENST00000302303 ZNF623O75123 536 aa10.37□□□□□ -0.75
RFX3-201ENST00000302303 AKAP3O75969 853 aa10.37□□□□□ -0.75
RFX3-201ENST00000302303 KIF20AO95235 890 aa10.37□□□□□ -0.75
RFX3-201ENST00000302303 ADRB2P07550 413 aa10.37□□□□□ -0.75
RFX3-201ENST00000302303 ZNF18P17022 549 aa10.37□□□□□ -0.75
RFX3-201ENST00000302303 RFC2P35250 354 aa10.37□□□□□ -0.75
RFX3-201ENST00000302303 MYBPC2Q14324 1141 aa10.37□□□□□ -0.75
RFX3-201ENST00000302303 SPATA1Q5VX52 437 aa10.37□□□□□ -0.75
RFX3-201ENST00000302303 NOTUMQ6P988 496 aa10.37□□□□□ -0.75
RFX3-201ENST00000302303 SLC27A1Q6PCB7 646 aa10.37□□□□□ -0.75
RFX3-201ENST00000302303 MRPL10Q7Z7H8 261 aaKnown RBP10.37□□□□□ -0.75
RFX3-201ENST00000302303 ZBTB33Q86T24 672 aa10.37□□□□□ -0.75
RFX3-201ENST00000302303 ZNF598Q86UK7 904 aaKnown RBP10.37□□□□□ -0.75
RFX3-201ENST00000302303 LUZP1Q86V48 1076 aa10.37□□□□□ -0.75
RFX3-201ENST00000302303 SAAL1Q96ER3 474 aa10.37□□□□□ -0.75
RFX3-201ENST00000302303 SRRTQ9BXP5 876 aaKnown RBP10.37□□□□□ -0.75
RFX3-201ENST00000302303 RBSNQ9H1K0 784 aa10.37□□□□□ -0.75
RFX3-201ENST00000302303 TSPYL2Q9H2G4 693 aaPredicted RBP10.37□□□□□ -0.75
RFX3-201ENST00000302303 TSPY26PQ9H489 355 aa10.37□□□□□ -0.75
RFX3-201ENST00000302303 RNF19AQ9NV58 838 aa10.37□□□□□ -0.75
RFX3-201ENST00000302303 FANCLQ9NW38 375 aa10.37□□□□□ -0.75
RFX3-201ENST00000302303 CGNQ9P2M7 1197 aaKnown RBP10.37□□□□□ -0.75
RFX3-201ENST00000302303 CPSF3Q9UKF6 684 aaKnown RBP10.37□□□□□ -0.75
RFX3-201ENST00000302303 ZMYND8Q9ULU4 1186 aaPredicted RBP10.37□□□□□ -0.75
RFX3-201ENST00000302303 HES2Q9Y543 173 aa10.37□□□□□ -0.75
RFX3-201ENST00000302303 RANBP2P49792 3224 aaKnown RBP10.37□□□□□ -0.75
RFX3-201ENST00000302303 GOLGA8IPA6NC78 632 aa10.36□□□□□ -0.75
RFX3-201ENST00000302303 GOLGA8JA6NMD2 632 aa10.36□□□□□ -0.75
RFX3-201ENST00000302303 IKBKBO14920 756 aa10.36□□□□□ -0.75
RFX3-201ENST00000302303 N4BP3O15049 544 aa10.36□□□□□ -0.75
RFX3-201ENST00000302303 OGTO15294 1046 aa10.36□□□□□ -0.75
RFX3-201ENST00000302303 NPTXRO95502 500 aa10.36□□□□□ -0.75
RFX3-201ENST00000302303 ACRP10323 421 aa10.36□□□□□ -0.75
RFX3-201ENST00000302303 MCF2P10911 925 aa10.36□□□□□ -0.75
RFX3-201ENST00000302303 NR2F2P24468 414 aa10.36□□□□□ -0.75
RFX3-201ENST00000302303 ACOT2P49753 483 aa10.36□□□□□ -0.75
RFX3-201ENST00000302303 AFF1P51825 1210 aaKnown RBP10.36□□□□□ -0.75
RFX3-201ENST00000302303 FKBP3Q00688 224 aaKnown RBP10.36□□□□□ -0.75
RFX3-201ENST00000302303 ADAM9Q13443 819 aa10.36□□□□□ -0.75
RFX3-201ENST00000302303 STIM1Q13586 685 aa10.36□□□□□ -0.75
RFX3-201ENST00000302303 SLC10A6Q3KNW5 377 aa10.36□□□□□ -0.75
RFX3-201ENST00000302303 C1orf220Q5T0J3 134 aa10.36□□□□□ -0.75
RFX3-201ENST00000302303 CDKAL1Q5VV42 579 aa10.36□□□□□ -0.75
RFX3-201ENST00000302303 SCARA3Q6AZY7 606 aa10.36□□□□□ -0.75
RFX3-201ENST00000302303 SLFN12LQ6IEE8 588 aa10.36□□□□□ -0.75
RFX3-201ENST00000302303 ARMCX5Q6P1M9 558 aa10.36□□□□□ -0.75
RFX3-201ENST00000302303 ALKAL1Q6UXT8 129 aa10.36□□□□□ -0.75
RFX3-201ENST00000302303 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.36□□□□□ -0.75
RFX3-201ENST00000302303 AGMOQ6ZNB7 445 aa10.36□□□□□ -0.75
RFX3-201ENST00000302303 HS2ST1Q7LGA3 356 aa10.36□□□□□ -0.75
RFX3-201ENST00000302303 APTXQ7Z2E3 356 aaKnown RBP10.36□□□□□ -0.75
RFX3-201ENST00000302303 CBWD2Q8IUF1 395 aa10.36□□□□□ -0.75
RFX3-201ENST00000302303 AOPEPQ8N6M6 819 aa10.36□□□□□ -0.75
RFX3-201ENST00000302303 GSTCDQ8NEC7 633 aa10.36□□□□□ -0.75
RFX3-201ENST00000302303 POMGNT1Q8WZA1 660 aa10.36□□□□□ -0.75
RFX3-201ENST00000302303 DPF3Q92784 378 aa10.36□□□□□ -0.75
RFX3-201ENST00000302303 CCDC51Q96ER9 411 aa10.36□□□□□ -0.75
RFX3-201ENST00000302303 BICD1Q96G01 975 aa10.36□□□□□ -0.75
RFX3-201ENST00000302303 NXF3Q9H4D5 531 aaKnown RBP10.36□□□□□ -0.75
RFX3-201ENST00000302303 IL23AQ9NPF7 189 aa10.36□□□□□ -0.75
RFX3-201ENST00000302303 FAM105AQ9NUU6 356 aa10.36□□□□□ -0.75
RFX3-201ENST00000302303 ANKFY1Q9P2R3 1169 aa10.36□□□□□ -0.75
RFX3-201ENST00000302303 DACH1Q9UI36 760 aa10.36□□□□□ -0.75
RFX3-201ENST00000302303 AGO2Q9UKV8 859 aaKnown RBP10.36□□□□□ -0.75
RFX3-201ENST00000302303 NFE2L3Q9Y4A8 694 aa10.36□□□□□ -0.75
RFX3-201ENST00000302303 IPPQ9Y573 584 aa10.36□□□□□ -0.75
RFX3-201ENST00000302303 PCDHB2Q9Y5E7 798 aa10.36□□□□□ -0.75
RFX3-201ENST00000302303 BICDL2A1A5D9 508 aa10.35□□□□□ -0.75
RFX3-201ENST00000302303 CALUO43852 315 aaPredicted RBP10.35□□□□□ -0.75
RFX3-201ENST00000302303 EXTL3O43909 919 aa10.35□□□□□ -0.75
RFX3-201ENST00000302303 GRM5P41594 1212 aa10.35□□□□□ -0.75
RFX3-201ENST00000302303 VASPP50552 380 aaPredicted RBP10.35□□□□□ -0.75
RFX3-201ENST00000302303 CYP2J2P51589 502 aa10.35□□□□□ -0.75
RFX3-201ENST00000302303 MARSP56192 900 aaKnown RBP10.35□□□□□ -0.75
RFX3-201ENST00000302303 MYL5Q02045 173 aa10.35□□□□□ -0.75
RFX3-201ENST00000302303 NOLC1Q14978 699 aaKnown RBP eCLIP10.35□□□□□ -0.75
RFX3-201ENST00000302303 ENOX2Q16206 610 aaKnown RBP10.35□□□□□ -0.75
RFX3-201ENST00000302303 ZNF568Q3ZCX4 644 aa10.35□□□□□ -0.75
RFX3-201ENST00000302303 XKR4Q5GH76 650 aa10.35□□□□□ -0.75
RFX3-201ENST00000302303 TMEM240Q5SV17 173 aa10.35□□□□□ -0.75
RFX3-201ENST00000302303 CNKSR3Q6P9H4 555 aa10.35□□□□□ -0.75
RFX3-201ENST00000302303 FILIP1Q7Z7B0 1213 aa10.35□□□□□ -0.75
RFX3-201ENST00000302303 ECHDC2Q86YB7 292 aa10.35□□□□□ -0.75
RFX3-201ENST00000302303 THNSL1Q8IYQ7 743 aa10.35□□□□□ -0.75
RFX3-201ENST00000302303 TMEM130Q8N3G9 435 aa10.35□□□□□ -0.75
RFX3-201ENST00000302303 TMEM199Q8N511 208 aa10.35□□□□□ -0.75
RFX3-201ENST00000302303 CSGALNACT2Q8N6G5 542 aa10.35□□□□□ -0.75
RFX3-201ENST00000302303 XXYLT1Q8NBI6 393 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms