RNA–Protein interactions for RNA: ENST00000301935.9

UBXN1-202, Transcript of UBX domain protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBXN1, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-202ENST00000301935 ALCAMQ13740 583 aa16.62■□□□□ 0.25
UBXN1-202ENST00000301935 COBLL1Q53SF7 1204 aa16.62■□□□□ 0.25
UBXN1-202ENST00000301935 FAM102BQ5T8I3 360 aa16.62■□□□□ 0.25
UBXN1-202ENST00000301935 MTHFD1LQ6UB35 978 aa16.62■□□□□ 0.25
UBXN1-202ENST00000301935 MYCT1Q8N699 235 aa16.62■□□□□ 0.25
UBXN1-202ENST00000301935 EFHBQ8N7U6 833 aa16.62■□□□□ 0.25
UBXN1-202ENST00000301935 SMRP1Q8NCR6 262 aa16.62■□□□□ 0.25
UBXN1-202ENST00000301935 NAT10Q9H0A0 1025 aaKnown RBP16.62■□□□□ 0.25
UBXN1-202ENST00000301935 CLEC1BQ9P126 229 aa16.62■□□□□ 0.25
UBXN1-202ENST00000301935 LRFN2Q9ULH4 789 aa16.62■□□□□ 0.25
UBXN1-202ENST00000301935 TRIOO75962 3097 aa16.62■□□□□ 0.25
UBXN1-202ENST00000301935 NPHP3-ACAD11A0A0J9YXS1 232 aa16.61■□□□□ 0.25
UBXN1-202ENST00000301935 C22orf31O95567 290 aa16.61■□□□□ 0.25
UBXN1-202ENST00000301935 PLS3P13797 630 aa16.61■□□□□ 0.25
UBXN1-202ENST00000301935 CASP1P29466 404 aa16.61■□□□□ 0.25
UBXN1-202ENST00000301935 NRIP1P48552 1158 aa16.61■□□□□ 0.25
UBXN1-202ENST00000301935 TYRO3Q06418 890 aa16.61■□□□□ 0.25
UBXN1-202ENST00000301935 COASYQ13057 564 aa16.61■□□□□ 0.25
UBXN1-202ENST00000301935 FAM26FQ5R3K3 315 aa16.61■□□□□ 0.25
UBXN1-202ENST00000301935 NME8Q8N427 588 aa16.61■□□□□ 0.25
UBXN1-202ENST00000301935 SPIRE2Q8WWL2 714 aa16.61■□□□□ 0.25
UBXN1-202ENST00000301935 PSPC1Q8WXF1 523 aaKnown RBP16.61■□□□□ 0.25
UBXN1-202ENST00000301935 NTPCRQ9BSD7 190 aaKnown RBP16.61■□□□□ 0.25
UBXN1-202ENST00000301935 ZHX3Q9H4I2 956 aa16.61■□□□□ 0.25
UBXN1-202ENST00000301935 PHLPP2Q6ZVD8 1323 aa16.61■□□□□ 0.25
UBXN1-202ENST00000301935 ARID2Q68CP9 1835 aa16.61■□□□□ 0.25
UBXN1-202ENST00000301935 GLP2RO95838 553 aa16.6■□□□□ 0.25
UBXN1-202ENST00000301935 ARL2P36404 184 aa16.6■□□□□ 0.25
UBXN1-202ENST00000301935 MRE11P49959 708 aa16.6■□□□□ 0.25
UBXN1-202ENST00000301935 POU5F1BQ06416 359 aa16.6■□□□□ 0.25
UBXN1-202ENST00000301935 RAD51AP2Q09MP3 1159 aa16.6■□□□□ 0.25
UBXN1-202ENST00000301935 NFX1Q12986 1120 aaKnown RBP16.6■□□□□ 0.25
UBXN1-202ENST00000301935 MAPK7Q13164 816 aa16.6■□□□□ 0.25
UBXN1-202ENST00000301935 DMP1Q13316 513 aaPredicted RBP16.6■□□□□ 0.25
UBXN1-202ENST00000301935 ODR4Q5SWX8 454 aa16.6■□□□□ 0.25
UBXN1-202ENST00000301935 EFCAB12Q6NXP0 572 aa16.6■□□□□ 0.25
UBXN1-202ENST00000301935 FAM43BQ6ZT52 329 aaPredicted RBP16.6■□□□□ 0.25
UBXN1-202ENST00000301935 DAW1Q8N136 415 aa16.6■□□□□ 0.25
UBXN1-202ENST00000301935 ERCC4Q92889 916 aaPredicted RBP16.6■□□□□ 0.25
UBXN1-202ENST00000301935 MFSD14AQ96MC6 490 aa16.6■□□□□ 0.25
UBXN1-202ENST00000301935 SH2D3AQ9BRG2 576 aa16.6■□□□□ 0.25
UBXN1-202ENST00000301935 FUCA2Q9BTY2 467 aa16.6■□□□□ 0.25
UBXN1-202ENST00000301935 ERVK-5Q9HDB9 667 aa16.6■□□□□ 0.25
UBXN1-202ENST00000301935 XPNPEP1Q9NQW7 623 aa16.6■□□□□ 0.25
UBXN1-202ENST00000301935 BARX2Q9UMQ3 279 aaPredicted RBP16.6■□□□□ 0.25
UBXN1-202ENST00000301935 PCDHB13Q9Y5F0 798 aa16.6■□□□□ 0.25
UBXN1-202ENST00000301935 PCDHGC5Q9Y5F6 944 aa16.6■□□□□ 0.25
UBXN1-202ENST00000301935 BIN1O00499 593 aa16.59■□□□□ 0.25
UBXN1-202ENST00000301935 MGEA5O60502 916 aa16.59■□□□□ 0.25
UBXN1-202ENST00000301935 UBE3AQ05086 875 aa16.59■□□□□ 0.25
UBXN1-202ENST00000301935 TFDP1Q14186 410 aa16.59■□□□□ 0.25
UBXN1-202ENST00000301935 RBM23Q86U06 439 aaKnown RBP16.59■□□□□ 0.25
UBXN1-202ENST00000301935 EDAQ92838 391 aa16.59■□□□□ 0.25
UBXN1-202ENST00000301935 KCNN1Q92952 543 aa16.59■□□□□ 0.25
UBXN1-202ENST00000301935 MAP7D2Q96T17 732 aa16.59■□□□□ 0.25
UBXN1-202ENST00000301935 POLR3FQ9H1D9 316 aaPredicted RBP16.59■□□□□ 0.25
UBXN1-202ENST00000301935 TSPY26PQ9H489 355 aa16.59■□□□□ 0.25
UBXN1-202ENST00000301935 ST6GALNAC4Q9H4F1 302 aa16.59■□□□□ 0.25
UBXN1-202ENST00000301935 MRPL44Q9H9J2 332 aaKnown RBP16.59■□□□□ 0.25
UBXN1-202ENST00000301935 GINS2Q9Y248 185 aa16.59■□□□□ 0.25
UBXN1-202ENST00000301935 NOC2LQ9Y3T9 749 aaKnown RBP16.59■□□□□ 0.25
UBXN1-202ENST00000301935 PCDHB7Q9Y5E2 793 aa16.59■□□□□ 0.25
UBXN1-202ENST00000301935 TECTAO75443 2155 aa16.59■□□□□ 0.25
UBXN1-202ENST00000301935 PIEZO1Q92508 2521 aa16.59■□□□□ 0.25
UBXN1-202ENST00000301935 KMT2EQ8IZD2 1858 aa16.59■□□□□ 0.25
UBXN1-202ENST00000301935 LOC730098B7Z3J9 87 aa16.58■□□□□ 0.24
UBXN1-202ENST00000301935 EIF3DO15371 548 aaKnown RBP eCLIP16.58■□□□□ 0.24
UBXN1-202ENST00000301935 RPS6KA5O75582 802 aa16.58■□□□□ 0.24
UBXN1-202ENST00000301935 IBSPP21815 317 aaPredicted RBP16.58■□□□□ 0.24
UBXN1-202ENST00000301935 NAMPTP43490 491 aa16.58■□□□□ 0.24
UBXN1-202ENST00000301935 MAEAQ7L5Y9 396 aa16.58■□□□□ 0.24
UBXN1-202ENST00000301935 SFR1Q86XK3 245 aa16.58■□□□□ 0.24
UBXN1-202ENST00000301935 GUF1Q8N442 669 aaKnown RBP16.58■□□□□ 0.24
UBXN1-202ENST00000301935 METTL13Q8N6R0 699 aa16.58■□□□□ 0.24
UBXN1-202ENST00000301935 LINC01465Q8N7H1 131 aa16.58■□□□□ 0.24
UBXN1-202ENST00000301935 TMEM40Q8WWA1 233 aa16.58■□□□□ 0.24
UBXN1-202ENST00000301935 HVCN1Q96D96 273 aa16.58■□□□□ 0.24
UBXN1-202ENST00000301935 RGS18Q9NS28 235 aa16.58■□□□□ 0.24
UBXN1-202ENST00000301935 C1orf112Q9NSG2 853 aa16.58■□□□□ 0.24
UBXN1-202ENST00000301935 SUCLA2Q9P2R7 463 aaPredicted RBP16.58■□□□□ 0.24
UBXN1-202ENST00000301935 USP15Q9Y4E8 981 aaPredicted RBP16.58■□□□□ 0.24
UBXN1-202ENST00000301935 PCDHB12Q9Y5F1 795 aa16.58■□□□□ 0.24
UBXN1-202ENST00000301935 UBE4BO95155 1302 aa16.58■□□□□ 0.24
UBXN1-202ENST00000301935 MYH11P35749 1972 aa16.58■□□□□ 0.24
UBXN1-202ENST00000301935 EVPLQ92817 2033 aa16.58■□□□□ 0.24
UBXN1-202ENST00000301935 DENND3A2RUS2 1198 aa16.57■□□□□ 0.24
UBXN1-202ENST00000301935 SFI1A8K8P3 1242 aa16.57■□□□□ 0.24
UBXN1-202ENST00000301935 PSMA7O14818 248 aa16.57■□□□□ 0.24
UBXN1-202ENST00000301935 ERCC5P28715 1186 aaPredicted RBP16.57■□□□□ 0.24
UBXN1-202ENST00000301935 EFNA5P52803 228 aa16.57■□□□□ 0.24
UBXN1-202ENST00000301935 CACNB1Q02641 598 aaPredicted RBP16.57■□□□□ 0.24
UBXN1-202ENST00000301935 CBX2Q14781 532 aaPredicted RBP16.57■□□□□ 0.24
UBXN1-202ENST00000301935 SPOUT1Q5T280 376 aaKnown RBP16.57■□□□□ 0.24
UBXN1-202ENST00000301935 FOXR2Q6PJQ5 311 aa16.57■□□□□ 0.24
UBXN1-202ENST00000301935 SLC24A5Q71RS6 500 aa16.57■□□□□ 0.24
UBXN1-202ENST00000301935 ZNF720Q7Z2F6 126 aa16.57■□□□□ 0.24
UBXN1-202ENST00000301935 BMP8AQ7Z5Y6 402 aa16.57■□□□□ 0.24
UBXN1-202ENST00000301935 KIAA0319LQ8IZA0 1049 aa16.57■□□□□ 0.24
UBXN1-202ENST00000301935 PRPF31Q8WWY3 499 aaKnown RBP16.57■□□□□ 0.24
UBXN1-202ENST00000301935 TMEM143Q96AN5 459 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms