RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 MYBPC2Q14324 1141 aa23.65■■□□□ 1.38
TPM4-201ENST00000300933 SLC47A2Q86VL8 602 aa23.65■■□□□ 1.38
TPM4-201ENST00000300933 METTL13Q8N6R0 699 aa23.65■■□□□ 1.38
TPM4-201ENST00000300933 IFT81Q8WYA0 676 aa23.65■■□□□ 1.38
TPM4-201ENST00000300933 DCPSQ96C86 337 aaKnown RBP23.65■■□□□ 1.38
TPM4-201ENST00000300933 CEP89Q96ST8 783 aa23.65■■□□□ 1.38
TPM4-201ENST00000300933 MYH9P35579 1960 aaKnown RBP23.65■■□□□ 1.38
TPM4-201ENST00000300933 GOLGA8KD6RF30 607 aa23.65■■□□□ 1.38
TPM4-201ENST00000300933 ATMINO43313 823 aaPredicted RBP23.65■■□□□ 1.38
TPM4-201ENST00000300933 SUPT20HL2P0C7V6 817 aa23.65■■□□□ 1.38
TPM4-201ENST00000300933 POLGP54098 1239 aaPredicted RBP23.65■■□□□ 1.38
TPM4-201ENST00000300933 TTLL12Q14166 644 aaPredicted RBP23.65■■□□□ 1.38
TPM4-201ENST00000300933 SEZ6Q53EL9 994 aa23.65■■□□□ 1.38
TPM4-201ENST00000300933 NOL9Q5SY16 702 aaKnown RBP23.65■■□□□ 1.38
TPM4-201ENST00000300933 SWT1Q5T5J6 900 aaKnown RBP23.65■■□□□ 1.38
TPM4-201ENST00000300933 LBX2Q6XYB7 198 aa23.65■■□□□ 1.38
TPM4-201ENST00000300933 ZNF572Q7Z3I7 529 aaPredicted RBP23.65■■□□□ 1.38
TPM4-201ENST00000300933 C12orf56Q8IXR9 622 aa23.65■■□□□ 1.38
TPM4-201ENST00000300933 KIFAP3Q92845 792 aa23.65■■□□□ 1.38
TPM4-201ENST00000300933 ZBTB45Q96K62 511 aaPredicted RBP23.65■■□□□ 1.38
TPM4-201ENST00000300933 AGPAT1Q99943 283 aa23.65■■□□□ 1.38
TPM4-201ENST00000300933 TSKSQ9UJT2 592 aa23.65■■□□□ 1.38
TPM4-201ENST00000300933 WNT7BP56706 349 aa23.64■■□□□ 1.38
TPM4-201ENST00000300933 MIS18BP1Q6P0N0 1132 aa23.64■■□□□ 1.38
TPM4-201ENST00000300933 ADAT2Q7Z6V5 191 aaKnown RBP23.64■■□□□ 1.38
TPM4-201ENST00000300933 RPUSD2Q8IZ73 545 aaKnown RBP23.64■■□□□ 1.38
TPM4-201ENST00000300933 TATDN2Q93075 761 aa23.64■■□□□ 1.38
TPM4-201ENST00000300933 PDLIM7Q9NR12 457 aa23.64■■□□□ 1.38
TPM4-201ENST00000300933 EXOC7Q9UPT5 735 aa23.64■■□□□ 1.38
TPM4-201ENST00000300933 H0YHG0 523 aa23.64■■□□□ 1.37
TPM4-201ENST00000300933 MYO1FO00160 1098 aa23.64■■□□□ 1.37
TPM4-201ENST00000300933 DGAT1O75907 488 aa23.64■■□□□ 1.37
TPM4-201ENST00000300933 ACOT2P49753 483 aa23.64■■□□□ 1.37
TPM4-201ENST00000300933 ATP6V0A4Q9HBG4 840 aa23.64■■□□□ 1.37
TPM4-201ENST00000300933 ZNF302Q9NR11 478 aa23.64■■□□□ 1.37
TPM4-201ENST00000300933 STIM2Q9P246 746 aa23.64■■□□□ 1.37
TPM4-201ENST00000300933 COG5Q9UP83 839 aa23.64■■□□□ 1.37
TPM4-201ENST00000300933 SOWAHBA6NEL2 793 aa23.63■■□□□ 1.37
TPM4-201ENST00000300933 KRT14P02533 472 aa23.63■■□□□ 1.37
TPM4-201ENST00000300933 ALDH5A1P51649 535 aaPredicted RBP23.63■■□□□ 1.37
TPM4-201ENST00000300933 GUCY2DQ02846 1103 aa23.63■■□□□ 1.37
TPM4-201ENST00000300933 LY6KQ17RY6 165 aa23.63■■□□□ 1.37
TPM4-201ENST00000300933 WDR78Q5VTH9 848 aa23.63■■□□□ 1.37
TPM4-201ENST00000300933 RDM1Q8NG50 284 aa23.63■■□□□ 1.37
TPM4-201ENST00000300933 CTNNBL1Q8WYA6 563 aaPredicted RBP23.63■■□□□ 1.37
TPM4-201ENST00000300933 IWS1Q96ST2 819 aa23.63■■□□□ 1.37
TPM4-201ENST00000300933 SH3GL2Q99962 352 aa23.63■■□□□ 1.37
TPM4-201ENST00000300933 LRRIQ4A6NIV6 560 aa23.63■■□□□ 1.37
TPM4-201ENST00000300933 OPA1O60313 960 aa23.63■■□□□ 1.37
TPM4-201ENST00000300933 FTLP02792 175 aaPredicted RBP23.63■■□□□ 1.37
TPM4-201ENST00000300933 MARK3P27448 753 aa23.63■■□□□ 1.37
TPM4-201ENST00000300933 PPARDQ03181 441 aa23.63■■□□□ 1.37
TPM4-201ENST00000300933 EMC2Q15006 297 aa23.63■■□□□ 1.37
TPM4-201ENST00000300933 NAA35Q5VZE5 725 aa23.63■■□□□ 1.37
TPM4-201ENST00000300933 ASAP3Q8TDY4 903 aa23.63■■□□□ 1.37
TPM4-201ENST00000300933 ZNF668Q96K58 619 aaPredicted RBP23.63■■□□□ 1.37
TPM4-201ENST00000300933 PCDHB18PQ96TA0 734 aa23.63■■□□□ 1.37
TPM4-201ENST00000300933 TIPINQ9BVW5 301 aa23.63■■□□□ 1.37
TPM4-201ENST00000300933 EPB41L5Q9HCM4 733 aa23.63■■□□□ 1.37
TPM4-201ENST00000300933 SYNGAP1Q96PV0 1343 aa23.63■■□□□ 1.37
TPM4-201ENST00000300933 TMEM110-MUSTN1A8MSY1 372 aa23.62■■□□□ 1.37
TPM4-201ENST00000300933 BTNL10A8MVZ5 291 aa23.62■■□□□ 1.37
TPM4-201ENST00000300933 UBA1P22314 1058 aaKnown RBP23.62■■□□□ 1.37
TPM4-201ENST00000300933 CARSP49589 748 aaKnown RBP23.62■■□□□ 1.37
TPM4-201ENST00000300933 DRP2Q13474 957 aa23.62■■□□□ 1.37
TPM4-201ENST00000300933 NOP9Q86U38 636 aaKnown RBP23.62■■□□□ 1.37
TPM4-201ENST00000300933 CDHR1Q96JP9 859 aa23.62■■□□□ 1.37
TPM4-201ENST00000300933 NTPCRQ9BSD7 190 aaKnown RBP23.62■■□□□ 1.37
TPM4-201ENST00000300933 HARSP12081 509 aaKnown RBP23.62■■□□□ 1.37
TPM4-201ENST00000300933 ITGA4P13612 1032 aa23.62■■□□□ 1.37
TPM4-201ENST00000300933 KIF22Q14807 665 aa23.62■■□□□ 1.37
TPM4-201ENST00000300933 SH3D19Q5HYK7 790 aa23.62■■□□□ 1.37
TPM4-201ENST00000300933 TMEM63BQ5T3F8 832 aa23.62■■□□□ 1.37
TPM4-201ENST00000300933 SV2AQ7L0J3 742 aa23.62■■□□□ 1.37
TPM4-201ENST00000300933 NT5DC3Q86UY8 548 aa23.62■■□□□ 1.37
TPM4-201ENST00000300933 SPATC1LQ9H0A9 340 aa23.62■■□□□ 1.37
TPM4-201ENST00000300933 TXNRD2Q9NNW7 524 aa23.62■■□□□ 1.37
TPM4-201ENST00000300933 HSF2BPO75031 334 aa23.61■■□□□ 1.37
TPM4-201ENST00000300933 HEXIM1O94992 359 aaKnown RBP23.61■■□□□ 1.37
TPM4-201ENST00000300933 XKR3Q5GH77 459 aa23.61■■□□□ 1.37
TPM4-201ENST00000300933 ZBTB41Q5SVQ8 909 aa23.61■■□□□ 1.37
TPM4-201ENST00000300933 SCARA3Q6AZY7 606 aa23.61■■□□□ 1.37
TPM4-201ENST00000300933 USP38Q8NB14 1042 aa23.61■■□□□ 1.37
TPM4-201ENST00000300933 IFT74Q96LB3 600 aa23.61■■□□□ 1.37
TPM4-201ENST00000300933 PPP2R3BQ9Y5P8 575 aa23.61■■□□□ 1.37
TPM4-201ENST00000300933 LCTP09848 1927 aa23.61■■□□□ 1.37
TPM4-201ENST00000300933 PRPF4BQ13523 1007 aaKnown RBP23.61■■□□□ 1.37
TPM4-201ENST00000300933 Q3C1V9 767 aa23.61■■□□□ 1.37
TPM4-201ENST00000300933 KRT39Q6A163 491 aa23.61■■□□□ 1.37
TPM4-201ENST00000300933 TRIM50Q86XT4 487 aa23.61■■□□□ 1.37
TPM4-201ENST00000300933 MCPH1Q8NEM0 835 aa23.61■■□□□ 1.37
TPM4-201ENST00000300933 NFU1Q9UMS0 254 aa23.61■■□□□ 1.37
TPM4-201ENST00000300933 NFASCO94856 1347 aa23.61■■□□□ 1.37
TPM4-201ENST00000300933 MMEP08473 750 aa23.6■■□□□ 1.37
TPM4-201ENST00000300933 ITIH3Q06033 890 aa23.6■■□□□ 1.37
TPM4-201ENST00000300933 ZNF211Q13398 564 aaPredicted RBP23.6■■□□□ 1.37
TPM4-201ENST00000300933 CPNE8Q86YQ8 564 aa23.6■■□□□ 1.37
TPM4-201ENST00000300933 OTUD6BQ8N6M0 293 aa23.6■■□□□ 1.37
TPM4-201ENST00000300933 ADARB2Q9NS39 739 aaKnown RBP23.6■■□□□ 1.37
TPM4-201ENST00000300933 ANKFY1Q9P2R3 1169 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms