RNA–Protein interactions for RNA: ENST00000299353.6

BORCS7-ASMT-201, Transcript of BORCS7-ASMT readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 5 BASIC

Gene BORCS7-ASMT, Length 2,670 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BORCS7-ASMT-201ENST00000299353 PRR12Q9ULL5 1215 aa7.55□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 ASTN1O14525 1302 aa7.54□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 FOCADQ5VW36 1801 aa7.54□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 CAPN5O15484 640 aaPredicted RBP7.54□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 PPP1R12BO60237 982 aaPredicted RBP7.54□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 GFRA3O60609 400 aa7.54□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 HEXIM1O94992 359 aaKnown RBP7.54□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 SNUPNO95149 360 aaKnown RBP7.54□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 APBA3O96018 575 aa7.54□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 NR3C1P04150 777 aa7.54□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 RPSAP08865 295 aaKnown RBP7.54□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 BMP3P12645 472 aa7.54□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 XRCC5P13010 732 aaKnown RBP7.54□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 TNFRSF8P28908 595 aa7.54□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 PAFAH1B1P43034 410 aa7.54□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 XRCC4Q13426 336 aa7.54□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 ELOAQ14241 798 aaKnown RBP7.54□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 SLC18A3Q16572 532 aa7.54□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 EXOC3L4Q17RC7 722 aa7.54□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 KNOP1Q1ED39 458 aaKnown RBP7.54□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 ANKRD20A8PQ5CZ79 823 aa7.54□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 ZNF662Q6ZS27 426 aa7.54□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 Q6ZVU0 165 aa7.54□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 PRICKLE2Q7Z3G6 844 aa7.54□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 ZNF572Q7Z3I7 529 aaPredicted RBP7.54□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 IRF2BP2Q7Z5L9 587 aa7.54□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 TRIM50Q86XT4 487 aa7.54□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 ZSWIM2Q8NEG5 633 aa7.54□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 LMBR1Q8WVP7 490 aa7.54□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 SPDL1Q96EA4 605 aa7.54□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 FAM84AQ96KN4 292 aa7.54□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 ZIM3Q96PE6 472 aa7.54□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 HOMER2Q9NSB8 354 aa7.54□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 HOMER3Q9NSC5 361 aa7.54□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 SEPT11Q9NVA2 429 aaKnown RBP7.54□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 GCNT4Q9P109 453 aa7.54□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 KDM3AQ9Y4C1 1321 aa7.54□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 DNM1LO00429 736 aa7.54□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 MGRN1O60291 552 aa7.54□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 CEP104O60308 925 aa7.54□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 TBCAO75347 108 aaKnown RBP7.54□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 ADH1AP07327 375 aa7.54□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 ITGA4P13612 1032 aa7.54□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 TCP1P17987 556 aaKnown RBP7.54□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 NR1D1P20393 614 aa7.54□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 MDH1P40925 334 aaKnown RBP7.54□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 USP11P51784 963 aa7.54□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 SEC24CP53992 1094 aa7.54□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 MCCD1P59942 119 aaPredicted RBP7.54□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 ITIH3Q06033 890 aa7.54□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 ORC2Q13416 577 aaPredicted RBP7.54□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 NAB2Q15742 525 aa7.54□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 ARHGAP44Q17R89 818 aa7.54□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 TAX1BP1Q86VP1 789 aa7.54□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 OR2W6PQ8NHA6 318 aa7.54□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 CRYGNQ8WXF5 182 aa7.54□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 SAAL1Q96ER3 474 aa7.54□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 CYFIP2Q96F07 1278 aa7.54□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 CCDC43Q96MW1 224 aaKnown RBP7.54□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 FAM210AQ96ND0 272 aa7.54□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 OSBPL7Q9BZF2 842 aa7.54□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 PCIF1Q9H4Z3 704 aa7.54□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 OSGEPQ9NPF4 335 aa7.54□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 VAV3Q9UKW4 847 aa7.54□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 TRPC5Q9UL62 973 aaPredicted RBP7.54□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 RABGAP1Q9Y3P9 1069 aa7.54□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 SIPA1L1O43166 1804 aa7.53□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 ABCB11O95342 1321 aa7.53□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 YDJCA8MPS7 323 aa7.53□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 RAD51CO43502 376 aa7.53□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 CLSTN1O94985 981 aa7.53□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 ARP10275 920 aa7.53□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 RPA1P27694 616 aa7.53□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 DHX9Q08211 1270 aaKnown RBP7.53□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 TRAF1Q13077 416 aa7.53□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 RBBP5Q15291 538 aaKnown RBP7.53□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 TLR1Q15399 786 aa7.53□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 SPRED3Q2MJR0 410 aa7.53□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 ACCSLQ4AC99 568 aa7.53□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 LACTB2Q53H82 288 aaPredicted RBP7.53□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 HYIQ5T013 277 aa7.53□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 PALB2Q86YC2 1186 aa7.53□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 GLYCTKQ8IVS8 523 aa7.53□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 SYT2Q8N9I0 419 aaPredicted RBP7.53□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 C3orf20Q8ND61 904 aa7.53□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 C1orf131Q8NDD1 294 aaKnown RBP7.53□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 PARD3BQ8TEW8 1205 aa7.53□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 U2AF1L4Q8WU68 220 aaKnown RBP7.53□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 BORCS6Q96GS4 357 aa7.53□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 CCDC17Q96LX7 622 aa7.53□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 TRIM31Q9BZY9 425 aa7.53□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 LRRC27Q9C0I9 530 aa7.53□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 DDX47Q9H0S4 455 aaKnown RBP7.53□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 EBF2Q9HAK2 575 aa7.53□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 ACP6Q9NPH0 428 aa7.53□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 LTBP1Q14766 1721 aa7.53□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 SSU72P8A0A1W2PR75 194 aa7.53□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 PJA2O43164 708 aa7.53□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 TGFB1I1O43294 461 aa7.53□□□□□ -1.2
BORCS7-ASMT-201ENST00000299353 SORBS3O60504 671 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms