RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 C2orf40Q9H1Z8 148 aa15.45■□□□□ 0.06
C9orf3-202ENST00000297979 ANKFY1Q9P2R3 1169 aa15.45■□□□□ 0.06
C9orf3-202ENST00000297979 ADAMTS1Q9UHI8 967 aa15.45■□□□□ 0.06
C9orf3-202ENST00000297979 A0A087X0T9 212 aa15.44■□□□□ 0.06
C9orf3-202ENST00000297979 PJA2O43164 708 aa15.44■□□□□ 0.06
C9orf3-202ENST00000297979 C22orf31O95567 290 aa15.44■□□□□ 0.06
C9orf3-202ENST00000297979 FAM228BP0C875 321 aa15.44■□□□□ 0.06
C9orf3-202ENST00000297979 ZNF286BP0CG31 522 aa15.44■□□□□ 0.06
C9orf3-202ENST00000297979 PNMA6AP0CW24 399 aaPredicted RBP15.44■□□□□ 0.06
C9orf3-202ENST00000297979 SRGAP2CP0DJJ0 459 aa15.44■□□□□ 0.06
C9orf3-202ENST00000297979 TFDP1Q14186 410 aa15.44■□□□□ 0.06
C9orf3-202ENST00000297979 EFCAB12Q6NXP0 572 aa15.44■□□□□ 0.06
C9orf3-202ENST00000297979 C17orf99Q6UX52 265 aa15.44■□□□□ 0.06
C9orf3-202ENST00000297979 ZPBP2Q6X784 338 aa15.44■□□□□ 0.06
C9orf3-202ENST00000297979 VTI1AQ96AJ9 217 aa15.44■□□□□ 0.06
C9orf3-202ENST00000297979 GPR88Q9GZN0 384 aa15.44■□□□□ 0.06
C9orf3-202ENST00000297979 DUSP10Q9Y6W6 482 aa15.44■□□□□ 0.06
C9orf3-202ENST00000297979 MACROD2A1Z1Q3 448 aa15.44■□□□□ 0.06
C9orf3-202ENST00000297979 PPFIA4O75335 1185 aa15.44■□□□□ 0.06
C9orf3-202ENST00000297979 ECM2O94769 699 aaPredicted RBP15.44■□□□□ 0.06
C9orf3-202ENST00000297979 LDHAP00338 332 aaKnown RBP15.44■□□□□ 0.06
C9orf3-202ENST00000297979 DLATP10515 647 aaKnown RBP15.44■□□□□ 0.06
C9orf3-202ENST00000297979 INSRRP14616 1297 aa15.44■□□□□ 0.06
C9orf3-202ENST00000297979 MATR3P43243 847 aaKnown RBP eCLIP15.44■□□□□ 0.064e-6■■□□□ 13.2
C9orf3-202ENST00000297979 RHPN2Q8IUC4 686 aa15.44■□□□□ 0.06
C9orf3-202ENST00000297979 OR6J1Q8NGC5 347 aa15.44■□□□□ 0.06
C9orf3-202ENST00000297979 ZBTB45Q96K62 511 aaPredicted RBP15.44■□□□□ 0.06
C9orf3-202ENST00000297979 POP1Q99575 1024 aaKnown RBP15.44■□□□□ 0.06
C9orf3-202ENST00000297979 C16orf70Q9BSU1 422 aa15.44■□□□□ 0.06
C9orf3-202ENST00000297979 MSTO1Q9BUK6 570 aa15.44■□□□□ 0.06
C9orf3-202ENST00000297979 MRPL4Q9BYD3 311 aaKnown RBP15.44■□□□□ 0.06
C9orf3-202ENST00000297979 HAPLN2Q9GZV7 340 aa15.44■□□□□ 0.06
C9orf3-202ENST00000297979 TOPORSQ9NS56 1045 aaPredicted RBP15.44■□□□□ 0.06
C9orf3-202ENST00000297979 COQ4Q9Y3A0 265 aa15.44■□□□□ 0.06
C9orf3-202ENST00000297979 TLL2Q9Y6L7 1015 aa15.44■□□□□ 0.06
C9orf3-202ENST00000297979 A0A0B4J269 797 aa15.44■□□□□ 0.06
C9orf3-202ENST00000297979 EVI5O60447 810 aa15.44■□□□□ 0.06
C9orf3-202ENST00000297979 CLCN3P51790 818 aa15.44■□□□□ 0.06
C9orf3-202ENST00000297979 NLRP11P59045 1033 aaKnown RBP15.44■□□□□ 0.06
C9orf3-202ENST00000297979 PSMD6Q15008 389 aa15.44■□□□□ 0.06
C9orf3-202ENST00000297979 VPS36Q86VN1 386 aa15.44■□□□□ 0.06
C9orf3-202ENST00000297979 METTL13Q8N6R0 699 aa15.44■□□□□ 0.06
C9orf3-202ENST00000297979 GEMIN8Q9NWZ8 242 aaKnown RBP15.44■□□□□ 0.06
C9orf3-202ENST00000297979 COL1A2P08123 1366 aa15.43■□□□□ 0.06
C9orf3-202ENST00000297979 MSCO60682 206 aa15.43■□□□□ 0.06
C9orf3-202ENST00000297979 MMP3P08254 477 aa15.43■□□□□ 0.06
C9orf3-202ENST00000297979 CCDC172P0C7W6 258 aa15.43■□□□□ 0.06
C9orf3-202ENST00000297979 HOXD8P13378 290 aaPredicted RBP15.43■□□□□ 0.06
C9orf3-202ENST00000297979 IGBP1P78318 339 aa15.43■□□□□ 0.06
C9orf3-202ENST00000297979 IRF5Q13568 498 aa15.43■□□□□ 0.06
C9orf3-202ENST00000297979 TUBB2AQ13885 445 aa15.43■□□□□ 0.06
C9orf3-202ENST00000297979 MAPK6Q16659 721 aa15.43■□□□□ 0.06
C9orf3-202ENST00000297979 ARHGAP44Q17R89 818 aa15.43■□□□□ 0.06
C9orf3-202ENST00000297979 ARHGEF19Q8IW93 802 aa15.43■□□□□ 0.06
C9orf3-202ENST00000297979 TUBB2BQ9BVA1 445 aa15.43■□□□□ 0.06
C9orf3-202ENST00000297979 UBE2TQ9NPD8 197 aaPredicted RBP15.43■□□□□ 0.06
C9orf3-202ENST00000297979 ASAP2O43150 1006 aa15.43■□□□□ 0.06
C9orf3-202ENST00000297979 PRKCBP05771 671 aa15.43■□□□□ 0.06
C9orf3-202ENST00000297979 HOXC6P09630 235 aa15.43■□□□□ 0.06
C9orf3-202ENST00000297979 ACOT2P49753 483 aa15.43■□□□□ 0.06
C9orf3-202ENST00000297979 RINLQ6ZS11 566 aa15.43■□□□□ 0.06
C9orf3-202ENST00000297979 FBXL13Q8NEE6 735 aa15.43■□□□□ 0.06
C9orf3-202ENST00000297979 MNS1Q8NEH6 495 aa15.43■□□□□ 0.06
C9orf3-202ENST00000297979 FNBP1Q96RU3 617 aa15.43■□□□□ 0.06
C9orf3-202ENST00000297979 ZFYVE28Q9HCC9 887 aa15.43■□□□□ 0.06
C9orf3-202ENST00000297979 FAM155AB1AL88 458 aaPredicted RBP15.42■□□□□ 0.06
C9orf3-202ENST00000297979 H3BRB1 525 aa15.42■□□□□ 0.06
C9orf3-202ENST00000297979 MAGEB2O15479 319 aa15.42■□□□□ 0.06
C9orf3-202ENST00000297979 LRRN2O75325 713 aa15.42■□□□□ 0.06
C9orf3-202ENST00000297979 GPC3P51654 580 aa15.42■□□□□ 0.06
C9orf3-202ENST00000297979 TNFAIP2Q03169 654 aa15.42■□□□□ 0.06
C9orf3-202ENST00000297979 SREBF2Q12772 1141 aa15.42■□□□□ 0.06
C9orf3-202ENST00000297979 C10orf76Q5T2E6 689 aa15.42■□□□□ 0.06
C9orf3-202ENST00000297979 CRELD2Q6UXH1 353 aaPredicted RBP15.42■□□□□ 0.06
C9orf3-202ENST00000297979 SV2AQ7L0J3 742 aa15.42■□□□□ 0.06
C9orf3-202ENST00000297979 ARMCX6Q7L4S7 300 aa15.42■□□□□ 0.06
C9orf3-202ENST00000297979 SEMA4DQ92854 862 aa15.42■□□□□ 0.06
C9orf3-202ENST00000297979 ZBTB10Q96DT7 871 aa15.42■□□□□ 0.06
C9orf3-202ENST00000297979 NLRP4Q96MN2 994 aa15.42■□□□□ 0.06
C9orf3-202ENST00000297979 TUT1Q9H6E5 874 aaKnown RBP15.42■□□□□ 0.06
C9orf3-202ENST00000297979 DOCK3Q8IZD9 2030 aa15.42■□□□□ 0.06
C9orf3-202ENST00000297979 TOM1L1O75674 476 aa15.42■□□□□ 0.06
C9orf3-202ENST00000297979 GJB1P08034 283 aa15.42■□□□□ 0.06
C9orf3-202ENST00000297979 KLRC1P26715 233 aa15.42■□□□□ 0.06
C9orf3-202ENST00000297979 CLDN10P78369 228 aa15.42■□□□□ 0.06
C9orf3-202ENST00000297979 DGKDQ16760 1214 aa15.42■□□□□ 0.06
C9orf3-202ENST00000297979 DNAJC14Q6Y2X3 702 aaPredicted RBP15.42■□□□□ 0.06
C9orf3-202ENST00000297979 CCDC102AQ96A19 550 aa15.42■□□□□ 0.06
C9orf3-202ENST00000297979 ZBTB9Q96C00 473 aa15.42■□□□□ 0.06
C9orf3-202ENST00000297979 CARD6Q9BX69 1037 aa15.42■□□□□ 0.06
C9orf3-202ENST00000297979 RBAKQ9NYW8 714 aaPredicted RBP15.42■□□□□ 0.06
C9orf3-202ENST00000297979 CDC23Q9UJX2 597 aa15.42■□□□□ 0.06
C9orf3-202ENST00000297979 ZSWIM8A7E2V4 1837 aa15.42■□□□□ 0.06
C9orf3-202ENST00000297979 CLDN3O15551 220 aa15.41■□□□□ 0.06
C9orf3-202ENST00000297979 ADCY6O43306 1168 aa15.41■□□□□ 0.06
C9orf3-202ENST00000297979 TACC1O75410 805 aa15.41■□□□□ 0.06
C9orf3-202ENST00000297979 BMS1Q14692 1282 aaKnown RBP15.41■□□□□ 0.06
C9orf3-202ENST00000297979 LRRN4CLQ8ND94 238 aa15.41■□□□□ 0.06
C9orf3-202ENST00000297979 TRIM58Q8NG06 486 aa15.41■□□□□ 0.06
C9orf3-202ENST00000297979 TAS1R2Q8TE23 839 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms