RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 DICER1Q9UPY3 1922 aaKnown RBP10.02□□□□□ -0.8
PRDM9-201ENST00000296682 ZNF233A6NK53 670 aa10.02□□□□□ -0.8
PRDM9-201ENST00000296682 BTNL10A8MVZ5 291 aa10.02□□□□□ -0.8
PRDM9-201ENST00000296682 EIF3DO15371 548 aaKnown RBP eCLIP10.02□□□□□ -0.8
PRDM9-201ENST00000296682 TBC1D12O60347 775 aa10.02□□□□□ -0.8
PRDM9-201ENST00000296682 PDE6CP51160 858 aa10.02□□□□□ -0.8
PRDM9-201ENST00000296682 HSD17B4P51659 736 aa10.02□□□□□ -0.8
PRDM9-201ENST00000296682 PLCB3Q01970 1234 aa10.02□□□□□ -0.8
PRDM9-201ENST00000296682 MAPK7Q13164 816 aa10.02□□□□□ -0.8
PRDM9-201ENST00000296682 TMEM270Q6UE05 265 aa10.02□□□□□ -0.8
PRDM9-201ENST00000296682 VSIG10LQ86VR7 867 aa10.02□□□□□ -0.8
PRDM9-201ENST00000296682 MAGOHBQ96A72 148 aaKnown RBP10.02□□□□□ -0.8
PRDM9-201ENST00000296682 ZBED3Q96IU2 234 aaPredicted RBP10.02□□□□□ -0.8
PRDM9-201ENST00000296682 CCDC114Q96M63 670 aa10.02□□□□□ -0.8
PRDM9-201ENST00000296682 MSTO1Q9BUK6 570 aa10.02□□□□□ -0.8
PRDM9-201ENST00000296682 KLHL11Q9NVR0 708 aa10.02□□□□□ -0.8
PRDM9-201ENST00000296682 UBIAD1Q9Y5Z9 338 aa10.02□□□□□ -0.8
PRDM9-201ENST00000296682 IRF6O14896 467 aa10.02□□□□□ -0.81
PRDM9-201ENST00000296682 SLC16A3O15427 465 aaKnown RBP10.02□□□□□ -0.81
PRDM9-201ENST00000296682 TUBBP07437 444 aa10.02□□□□□ -0.81
PRDM9-201ENST00000296682 MFAP3P55082 362 aa10.02□□□□□ -0.81
PRDM9-201ENST00000296682 ADCY1Q08828 1119 aa10.02□□□□□ -0.81
PRDM9-201ENST00000296682 PAK2Q13177 524 aa10.02□□□□□ -0.81
PRDM9-201ENST00000296682 ORC1Q13415 861 aa10.02□□□□□ -0.81
PRDM9-201ENST00000296682 VGLL4Q14135 290 aa10.02□□□□□ -0.81
PRDM9-201ENST00000296682 FKBP1CQ5VVH2 108 aa10.02□□□□□ -0.81
PRDM9-201ENST00000296682 RHPN2Q8IUC4 686 aa10.02□□□□□ -0.81
PRDM9-201ENST00000296682 TSKSQ9UJT2 592 aa10.02□□□□□ -0.81
PRDM9-201ENST00000296682 FBXL5Q9UKA1 691 aa10.02□□□□□ -0.81
PRDM9-201ENST00000296682 GOLGA6L10A0A0M3HER8 536 aa10.02□□□□□ -0.81
PRDM9-201ENST00000296682 GJB6O95452 261 aa10.02□□□□□ -0.81
PRDM9-201ENST00000296682 GUCY2CP25092 1073 aa10.02□□□□□ -0.81
PRDM9-201ENST00000296682 SLCO1A2P46721 670 aa10.02□□□□□ -0.81
PRDM9-201ENST00000296682 FAM182AQ5T1J6 154 aa10.02□□□□□ -0.81
PRDM9-201ENST00000296682 KRT39Q6A163 491 aa10.02□□□□□ -0.81
PRDM9-201ENST00000296682 SV2AQ7L0J3 742 aa10.02□□□□□ -0.81
PRDM9-201ENST00000296682 ZNF526Q8TF50 670 aaPredicted RBP10.02□□□□□ -0.81
PRDM9-201ENST00000296682 SEMA4DQ92854 862 aa10.02□□□□□ -0.81
PRDM9-201ENST00000296682 COPS5Q92905 334 aa10.02□□□□□ -0.81
PRDM9-201ENST00000296682 C11orf70Q9BRQ4 267 aa10.02□□□□□ -0.81
PRDM9-201ENST00000296682 ATP6V0A4Q9HBG4 840 aa10.02□□□□□ -0.81
PRDM9-201ENST00000296682 FBXO40Q9UH90 709 aa10.02□□□□□ -0.81
PRDM9-201ENST00000296682 HPCAL4Q9UM19 191 aa10.02□□□□□ -0.81
PRDM9-201ENST00000296682 ALG6Q9Y672 507 aa10.02□□□□□ -0.81
PRDM9-201ENST00000296682 IGSF9BQ9UPX0 1349 aa10.02□□□□□ -0.81
PRDM9-201ENST00000296682 DSG3P32926 999 aa10.01□□□□□ -0.81
PRDM9-201ENST00000296682 CTNNA1P35221 906 aaKnown RBP10.01□□□□□ -0.81
PRDM9-201ENST00000296682 PPP1R7Q15435 360 aa10.01□□□□□ -0.81
PRDM9-201ENST00000296682 CAPN12Q6ZSI9 719 aa10.01□□□□□ -0.81
PRDM9-201ENST00000296682 USP37Q86T82 979 aa10.01□□□□□ -0.81
PRDM9-201ENST00000296682 TSEN2Q8NCE0 465 aaKnown RBP10.01□□□□□ -0.81
PRDM9-201ENST00000296682 IWS1Q96ST2 819 aa10.01□□□□□ -0.81
PRDM9-201ENST00000296682 IMPG2Q9BZV3 1241 aa10.01□□□□□ -0.81
PRDM9-201ENST00000296682 R3HDMLQ9H3Y0 253 aa10.01□□□□□ -0.81
PRDM9-201ENST00000296682 SIX2Q9NPC8 291 aa10.01□□□□□ -0.81
PRDM9-201ENST00000296682 CYP26B1Q9NR63 512 aa10.01□□□□□ -0.81
PRDM9-201ENST00000296682 CYP39A1Q9NYL5 469 aa10.01□□□□□ -0.81
PRDM9-201ENST00000296682 NR2E1Q9Y466 385 aa10.01□□□□□ -0.81
PRDM9-201ENST00000296682 PIK3R2O00459 728 aa10.01□□□□□ -0.81
PRDM9-201ENST00000296682 SFNP31947 248 aa10.01□□□□□ -0.81
PRDM9-201ENST00000296682 MARCKSL1P49006 195 aa10.01□□□□□ -0.81
PRDM9-201ENST00000296682 HIRAP54198 1017 aaPredicted RBP10.01□□□□□ -0.81
PRDM9-201ENST00000296682 MTM1Q13496 603 aa10.01□□□□□ -0.81
PRDM9-201ENST00000296682 C10orf67Q8IYJ2 551 aa10.01□□□□□ -0.81
PRDM9-201ENST00000296682 SYCE1Q8N0S2 351 aa10.01□□□□□ -0.81
PRDM9-201ENST00000296682 RNF149Q8NC42 400 aa10.01□□□□□ -0.81
PRDM9-201ENST00000296682 FBXL13Q8NEE6 735 aa10.01□□□□□ -0.81
PRDM9-201ENST00000296682 KCNN1Q92952 543 aa10.01□□□□□ -0.81
PRDM9-201ENST00000296682 ARL8AQ96BM9 186 aa10.01□□□□□ -0.81
PRDM9-201ENST00000296682 CNOT8Q9UFF9 292 aaKnown RBP10.01□□□□□ -0.81
PRDM9-201ENST00000296682 UTP11Q9Y3A2 253 aaKnown RBP10.01□□□□□ -0.81
PRDM9-201ENST00000296682 ERLIN2O94905 339 aa10.01□□□□□ -0.81
PRDM9-201ENST00000296682 ZBTB48P10074 688 aaPredicted RBP10.01□□□□□ -0.81
PRDM9-201ENST00000296682 STAT5BP51692 787 aa10.01□□□□□ -0.81
PRDM9-201ENST00000296682 SP2Q02086 613 aa10.01□□□□□ -0.81
PRDM9-201ENST00000296682 DHX9Q08211 1270 aaKnown RBP10.01□□□□□ -0.81
PRDM9-201ENST00000296682 KCTD2Q14681 263 aa10.01□□□□□ -0.81
PRDM9-201ENST00000296682 BRDTQ58F21 947 aaPredicted RBP10.01□□□□□ -0.81
PRDM9-201ENST00000296682 ZBTB41Q5SVQ8 909 aa10.01□□□□□ -0.81
PRDM9-201ENST00000296682 MEI1Q5TIA1 1274 aa10.01□□□□□ -0.81
PRDM9-201ENST00000296682 APOBEC3FQ8IUX4 373 aaKnown RBP10.01□□□□□ -0.81
PRDM9-201ENST00000296682 CCDC26Q8TAB7 109 aa10.01□□□□□ -0.81
PRDM9-201ENST00000296682 PLEKHO2Q8TD55 490 aa10.01□□□□□ -0.81
PRDM9-201ENST00000296682 NUP85Q9BW27 656 aa10.01□□□□□ -0.81
PRDM9-201ENST00000296682 SYNCQ9H7C4 482 aa10.01□□□□□ -0.81
PRDM9-201ENST00000296682 RAB20Q9NX57 234 aa10.01□□□□□ -0.81
PRDM9-201ENST00000296682 ANAPC7Q9UJX3 599 aa10.01□□□□□ -0.81
PRDM9-201ENST00000296682 AGO2Q9UKV8 859 aaKnown RBP10.01□□□□□ -0.81
PRDM9-201ENST00000296682 ZNFX1Q9P2E3 1918 aaKnown RBP10.01□□□□□ -0.81
PRDM9-201ENST00000296682 ZMYM2Q9UBW7 1377 aa10.01□□□□□ -0.81
PRDM9-201ENST00000296682 MYH11P35749 1972 aa10□□□□□ -0.81
PRDM9-201ENST00000296682 GSTTP1A0A1W2PQM5 241 aa10□□□□□ -0.81
PRDM9-201ENST00000296682 HGSO14964 777 aaPredicted RBP10□□□□□ -0.81
PRDM9-201ENST00000296682 GNGT1P63211 74 aa10□□□□□ -0.81
PRDM9-201ENST00000296682 DRP2Q13474 957 aa10□□□□□ -0.81
PRDM9-201ENST00000296682 TRPC3Q13507 836 aa10□□□□□ -0.81
PRDM9-201ENST00000296682 EMC2Q15006 297 aa10□□□□□ -0.81
PRDM9-201ENST00000296682 NEK9Q8TD19 979 aa10□□□□□ -0.81
PRDM9-201ENST00000296682 C1orf54Q8WWF1 131 aa10□□□□□ -0.81
PRDM9-201ENST00000296682 CASKIN2Q8WXE0 1202 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms