RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 METTL13Q8N6R0 699 aa16.87■□□□□ 0.29
LSM6-201ENST00000296581 ZBTB45Q96K62 511 aaPredicted RBP16.87■□□□□ 0.29
LSM6-201ENST00000296581 SPAG5Q96R06 1193 aa16.87■□□□□ 0.29
LSM6-201ENST00000296581 MRPL4Q9BYD3 311 aaKnown RBP16.87■□□□□ 0.29
LSM6-201ENST00000296581 LDHAP00338 332 aaKnown RBP16.86■□□□□ 0.29
LSM6-201ENST00000296581 PRKCBP05771 671 aa16.86■□□□□ 0.29
LSM6-201ENST00000296581 RFX1P22670 979 aa16.86■□□□□ 0.29
LSM6-201ENST00000296581 KIF11P52732 1056 aa16.86■□□□□ 0.29
LSM6-201ENST00000296581 PTENP60484 403 aa16.86■□□□□ 0.29
LSM6-201ENST00000296581 PPFIA1Q13136 1202 aa16.86■□□□□ 0.29
LSM6-201ENST00000296581 ASIC2Q16515 512 aa16.86■□□□□ 0.29
LSM6-201ENST00000296581 MAPK6Q16659 721 aa16.86■□□□□ 0.29
LSM6-201ENST00000296581 GJB7Q6PEY0 223 aa16.86■□□□□ 0.29
LSM6-201ENST00000296581 ZNF592Q92610 1267 aa16.86■□□□□ 0.29
LSM6-201ENST00000296581 CCDC127Q96BQ5 260 aa16.86■□□□□ 0.29
LSM6-201ENST00000296581 FZD8Q9H461 694 aa16.86■□□□□ 0.29
LSM6-201ENST00000296581 TMEM8AQ9HCN3 771 aa16.86■□□□□ 0.29
LSM6-201ENST00000296581 LZTFL1Q9NQ48 299 aa16.86■□□□□ 0.29
LSM6-201ENST00000296581 APEX2Q9UBZ4 518 aa16.86■□□□□ 0.29
LSM6-201ENST00000296581 COQ4Q9Y3A0 265 aa16.86■□□□□ 0.29
LSM6-201ENST00000296581 ZNF263O14978 683 aa16.86■□□□□ 0.29
LSM6-201ENST00000296581 IPO7O95373 1038 aaKnown RBP16.86■□□□□ 0.29
LSM6-201ENST00000296581 F2P00734 622 aa16.86■□□□□ 0.29
LSM6-201ENST00000296581 GJB1P08034 283 aa16.86■□□□□ 0.29
LSM6-201ENST00000296581 CLDN10P78369 228 aa16.86■□□□□ 0.29
LSM6-201ENST00000296581 PSMD6Q15008 389 aa16.86■□□□□ 0.29
LSM6-201ENST00000296581 GRIK4Q16099 956 aa16.86■□□□□ 0.29
LSM6-201ENST00000296581 CRELD2Q6UXH1 353 aaPredicted RBP16.86■□□□□ 0.29
LSM6-201ENST00000296581 IRF2BP2Q7Z5L9 587 aa16.86■□□□□ 0.29
LSM6-201ENST00000296581 IFNLR1Q8IU57 520 aaPredicted RBP16.86■□□□□ 0.29
LSM6-201ENST00000296581 STK33Q9BYT3 514 aa16.86■□□□□ 0.29
LSM6-201ENST00000296581 DNAJC12Q9UKB3 198 aa16.86■□□□□ 0.29
LSM6-201ENST00000296581 TTLL13PA6NNM8 815 aa16.85■□□□□ 0.29
LSM6-201ENST00000296581 TOM1L1O75674 476 aa16.85■□□□□ 0.29
LSM6-201ENST00000296581 PRKCIP41743 596 aa16.85■□□□□ 0.29
LSM6-201ENST00000296581 NLRP11P59045 1033 aaKnown RBP16.85■□□□□ 0.29
LSM6-201ENST00000296581 LACTBP83111 547 aaPredicted RBP16.85■□□□□ 0.29
LSM6-201ENST00000296581 ARHGAP29Q52LW3 1261 aa16.85■□□□□ 0.29
LSM6-201ENST00000296581 MARCH8Q5T0T0 291 aa16.85■□□□□ 0.29
LSM6-201ENST00000296581 KRT39Q6A163 491 aa16.85■□□□□ 0.29
LSM6-201ENST00000296581 REM2Q8IYK8 340 aaPredicted RBP16.85■□□□□ 0.29
LSM6-201ENST00000296581 NLRP4Q96MN2 994 aa16.85■□□□□ 0.29
LSM6-201ENST00000296581 ACO2Q99798 780 aaKnown RBP16.85■□□□□ 0.29
LSM6-201ENST00000296581 MSTO1Q9BUK6 570 aa16.85■□□□□ 0.29
LSM6-201ENST00000296581 DEF6Q9H4E7 631 aa16.85■□□□□ 0.29
LSM6-201ENST00000296581 HAUS4Q9H6D7 363 aa16.85■□□□□ 0.29
LSM6-201ENST00000296581 RBAK-RBAKDNI3L0D1 243 aa16.85■□□□□ 0.29
LSM6-201ENST00000296581 ACKR2O00590 384 aa16.85■□□□□ 0.29
LSM6-201ENST00000296581 ABLIM1O14639 778 aa16.85■□□□□ 0.29
LSM6-201ENST00000296581 PSMC4P43686 418 aa16.85■□□□□ 0.29
LSM6-201ENST00000296581 MBTD1Q05BQ5 628 aa16.85■□□□□ 0.29
LSM6-201ENST00000296581 TDRD12Q587J7 1177 aaKnown RBP16.85■□□□□ 0.29
LSM6-201ENST00000296581 PHLDB3Q6NSJ2 640 aa16.85■□□□□ 0.29
LSM6-201ENST00000296581 KAT2BQ92831 832 aa16.85■□□□□ 0.29
LSM6-201ENST00000296581 LENG1Q96BZ8 264 aaPredicted RBP16.85■□□□□ 0.29
LSM6-201ENST00000296581 ARHGAP39Q9C0H5 1083 aa16.85■□□□□ 0.29
LSM6-201ENST00000296581 ANKFY1Q9P2R3 1169 aa16.85■□□□□ 0.29
LSM6-201ENST00000296581 DNAI1Q9UI46 699 aa16.85■□□□□ 0.29
LSM6-201ENST00000296581 BZW2Q9Y6E2 419 aaKnown RBP16.85■□□□□ 0.29
LSM6-201ENST00000296581 RRN3P2A6NIE6 340 aa16.84■□□□□ 0.29
LSM6-201ENST00000296581 FANCGO15287 622 aa16.84■□□□□ 0.29
LSM6-201ENST00000296581 AKR1B10O60218 316 aa16.84■□□□□ 0.29
LSM6-201ENST00000296581 TMOD1P28289 359 aa16.84■□□□□ 0.29
LSM6-201ENST00000296581 GNG11P61952 73 aa16.84■□□□□ 0.29
LSM6-201ENST00000296581 NCBP1Q09161 790 aaKnown RBP16.84■□□□□ 0.29
LSM6-201ENST00000296581 KLHL30Q0D2K2 578 aa16.84■□□□□ 0.29
LSM6-201ENST00000296581 SPA17Q15506 151 aa16.84■□□□□ 0.29
LSM6-201ENST00000296581 GPIHBP1Q8IV16 184 aa16.84■□□□□ 0.29
LSM6-201ENST00000296581 POP1Q99575 1024 aaKnown RBP16.84■□□□□ 0.29
LSM6-201ENST00000296581 F8VZ95 297 aa16.84■□□□□ 0.29
LSM6-201ENST00000296581 CLDN3O15551 220 aa16.84■□□□□ 0.29
LSM6-201ENST00000296581 FAM189A1O60320 539 aa16.84■□□□□ 0.29
LSM6-201ENST00000296581 AOC2O75106 756 aa16.84■□□□□ 0.29
LSM6-201ENST00000296581 ABL1P00519 1130 aa16.84■□□□□ 0.29
LSM6-201ENST00000296581 PROZP22891 400 aa16.84■□□□□ 0.29
LSM6-201ENST00000296581 STAT1P42224 750 aa16.84■□□□□ 0.29
LSM6-201ENST00000296581 PHKA2P46019 1235 aa16.84■□□□□ 0.29
LSM6-201ENST00000296581 ACOT2P49753 483 aa16.84■□□□□ 0.29
LSM6-201ENST00000296581 CPT1AP50416 773 aa16.84■□□□□ 0.29
LSM6-201ENST00000296581 VAV2P52735 878 aa16.84■□□□□ 0.29
LSM6-201ENST00000296581 CYP27A1Q02318 531 aa16.84■□□□□ 0.29
LSM6-201ENST00000296581 MAP2K1Q02750 393 aaPredicted RBP16.84■□□□□ 0.29
LSM6-201ENST00000296581 DEFB115Q30KQ5 88 aa16.84■□□□□ 0.29
LSM6-201ENST00000296581 C15orf39Q6ZRI6 1047 aa16.84■□□□□ 0.29
LSM6-201ENST00000296581 TSHZ1Q6ZSZ6 1077 aa16.84■□□□□ 0.29
LSM6-201ENST00000296581 VTI1AQ96AJ9 217 aa16.84■□□□□ 0.29
LSM6-201ENST00000296581 CAPNS2Q96L46 248 aa16.84■□□□□ 0.29
LSM6-201ENST00000296581 GPR88Q9GZN0 384 aa16.84■□□□□ 0.29
LSM6-201ENST00000296581 YY1AP1Q9H869 796 aa16.84■□□□□ 0.29
LSM6-201ENST00000296581 IFT122Q9HBG6 1241 aa16.84■□□□□ 0.29
LSM6-201ENST00000296581 TOPORSQ9NS56 1045 aaPredicted RBP16.84■□□□□ 0.29
LSM6-201ENST00000296581 CASP8AP2Q9UKL3 1982 aa16.83■□□□□ 0.28
LSM6-201ENST00000296581 KIF5CO60282 957 aa16.83■□□□□ 0.28
LSM6-201ENST00000296581 GPC3P51654 580 aa16.83■□□□□ 0.28
LSM6-201ENST00000296581 MCL1Q07820 350 aa16.83■□□□□ 0.28
LSM6-201ENST00000296581 DRAP1Q14919 205 aaPredicted RBP16.83■□□□□ 0.28
LSM6-201ENST00000296581 FAM187BQ17R55 369 aa16.83■□□□□ 0.28
LSM6-201ENST00000296581 KIAA1328Q86T90 577 aa16.83■□□□□ 0.28
LSM6-201ENST00000296581 FMNL3Q8IVF7 1028 aa16.83■□□□□ 0.28
LSM6-201ENST00000296581 WDR24Q96S15 920 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms