RNA–Protein interactions for RNA: ENST00000296273.6

RFC4-201, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC4, Length 1,384 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-201ENST00000296273 M0R2N6 131 aa11.75□□□□□ -0.53
RFC4-201ENST00000296273 C2CD2LO14523 706 aa11.75□□□□□ -0.53
RFC4-201ENST00000296273 TEX28O15482 410 aa11.75□□□□□ -0.53
RFC4-201ENST00000296273 NARSO43776 548 aaKnown RBP11.75□□□□□ -0.53
RFC4-201ENST00000296273 N4BP1O75113 896 aaKnown RBP11.75□□□□□ -0.53
RFC4-201ENST00000296273 ERLIN2O94905 339 aa11.75□□□□□ -0.53
RFC4-201ENST00000296273 DEXIO95424 95 aa11.75□□□□□ -0.53
RFC4-201ENST00000296273 POMCP01189 267 aa11.75□□□□□ -0.53
RFC4-201ENST00000296273 P4HBP07237 508 aaKnown RBP11.75□□□□□ -0.53
RFC4-201ENST00000296273 CFHP08603 1231 aa11.75□□□□□ -0.53
RFC4-201ENST00000296273 ITGA4P13612 1032 aa11.75□□□□□ -0.53
RFC4-201ENST00000296273 PDIA3P30101 505 aaKnown RBP11.75□□□□□ -0.53
RFC4-201ENST00000296273 HOXA11P31270 313 aaPredicted RBP11.75□□□□□ -0.53
RFC4-201ENST00000296273 OR1G1P47890 313 aa11.75□□□□□ -0.53
RFC4-201ENST00000296273 GLUD2P49448 558 aa11.75□□□□□ -0.53
RFC4-201ENST00000296273 DSG1Q02413 1049 aa11.75□□□□□ -0.53
RFC4-201ENST00000296273 SSRP1Q08945 709 aaKnown RBP11.75□□□□□ -0.53
RFC4-201ENST00000296273 NCBP1Q09161 790 aaKnown RBP11.75□□□□□ -0.53
RFC4-201ENST00000296273 ST3GAL1Q11201 340 aa11.75□□□□□ -0.53
RFC4-201ENST00000296273 PLA2G4FQ68DD2 849 aa11.75□□□□□ -0.53
RFC4-201ENST00000296273 PHLDB3Q6NSJ2 640 aa11.75□□□□□ -0.53
RFC4-201ENST00000296273 OTUD6AQ7L8S5 288 aa11.75□□□□□ -0.53
RFC4-201ENST00000296273 COLGALT2Q8IYK4 626 aa11.75□□□□□ -0.53
RFC4-201ENST00000296273 SLC44A3Q8N4M1 653 aa11.75□□□□□ -0.53
RFC4-201ENST00000296273 FEZF2Q8TBJ5 459 aa11.75□□□□□ -0.53
RFC4-201ENST00000296273 PRPF31Q8WWY3 499 aaKnown RBP11.75□□□□□ -0.53
RFC4-201ENST00000296273 CCDC51Q96ER9 411 aa11.75□□□□□ -0.53
RFC4-201ENST00000296273 FAM20AQ96MK3 541 aa11.75□□□□□ -0.53
RFC4-201ENST00000296273 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.75□□□□□ -0.533e-13■■■■■ 29.1
RFC4-201ENST00000296273 MARCH5Q9NX47 278 aa11.75□□□□□ -0.53
RFC4-201ENST00000296273 ZDHHC7Q9NXF8 308 aa11.75□□□□□ -0.53
RFC4-201ENST00000296273 DDX25Q9UHL0 483 aaKnown RBP11.75□□□□□ -0.53
RFC4-201ENST00000296273 VPS37CA5D8V6 355 aaPredicted RBP11.74□□□□□ -0.53
RFC4-201ENST00000296273 KRBA1A5PL33 1030 aa11.74□□□□□ -0.53
RFC4-201ENST00000296273 EFEMP2O95967 443 aa11.74□□□□□ -0.53
RFC4-201ENST00000296273 SRGAP2CP0DJJ0 459 aa11.74□□□□□ -0.53
RFC4-201ENST00000296273 AFF1P51825 1210 aaKnown RBP11.74□□□□□ -0.53
RFC4-201ENST00000296273 CCT2P78371 535 aaKnown RBP11.74□□□□□ -0.53
RFC4-201ENST00000296273 CREMQ03060 361 aa11.74□□□□□ -0.53
RFC4-201ENST00000296273 DSC1Q08554 894 aa11.74□□□□□ -0.53
RFC4-201ENST00000296273 LAMTOR4Q0VGL1 99 aa11.74□□□□□ -0.53
RFC4-201ENST00000296273 SCRN1Q12765 414 aa11.74□□□□□ -0.53
RFC4-201ENST00000296273 ZSCAN23Q3MJ62 389 aa11.74□□□□□ -0.53
RFC4-201ENST00000296273 UBXN11Q5T124 520 aa11.74□□□□□ -0.53
RFC4-201ENST00000296273 KIAA0319Q5VV43 1072 aa11.74□□□□□ -0.53
RFC4-201ENST00000296273 CAVIN1Q6NZI2 390 aaKnown RBP11.74□□□□□ -0.53
RFC4-201ENST00000296273 NOTUMQ6P988 496 aa11.74□□□□□ -0.53
RFC4-201ENST00000296273 KRT25Q7Z3Z0 450 aa11.74□□□□□ -0.53
RFC4-201ENST00000296273 C4orf19Q8IY42 314 aa11.74□□□□□ -0.53
RFC4-201ENST00000296273 HACE1Q8IYU2 909 aa11.74□□□□□ -0.53
RFC4-201ENST00000296273 RNF149Q8NC42 400 aa11.74□□□□□ -0.53
RFC4-201ENST00000296273 KCNG4Q8TDN1 519 aa11.74□□□□□ -0.53
RFC4-201ENST00000296273 SMG7Q92540 1137 aaKnown RBP11.74□□□□□ -0.53
RFC4-201ENST00000296273 BORCS6Q96GS4 357 aa11.74□□□□□ -0.53
RFC4-201ENST00000296273 COLEC11Q9BWP8 271 aa11.74□□□□□ -0.53
RFC4-201ENST00000296273 MINDY3Q9H8M7 445 aa11.74□□□□□ -0.53
RFC4-201ENST00000296273 PIDD1Q9HB75 910 aa11.74□□□□□ -0.53
RFC4-201ENST00000296273 CHST7Q9NS84 486 aa11.74□□□□□ -0.53
RFC4-201ENST00000296273 PRG3Q9Y2Y8 225 aaPredicted RBP11.74□□□□□ -0.53
RFC4-201ENST00000296273 IPPQ9Y573 584 aa11.74□□□□□ -0.53
RFC4-201ENST00000296273 ZFP37Q9Y6Q3 630 aaPredicted RBP11.74□□□□□ -0.53
RFC4-201ENST00000296273 C2orf16Q68DN1 1984 aa11.73□□□□□ -0.53
RFC4-201ENST00000296273 ARL5CA6NH57 179 aa11.73□□□□□ -0.53
RFC4-201ENST00000296273 CPLX1O14810 134 aa11.73□□□□□ -0.53
RFC4-201ENST00000296273 TBX3O15119 743 aa11.73□□□□□ -0.53
RFC4-201ENST00000296273 RFPL2O75678 378 aa11.73□□□□□ -0.53
RFC4-201ENST00000296273 GCFC2P16383 781 aaKnown RBP11.73□□□□□ -0.53
RFC4-201ENST00000296273 YWHABP31946 246 aaKnown RBP11.73□□□□□ -0.53
RFC4-201ENST00000296273 NPEPPSP55786 919 aa11.73□□□□□ -0.53
RFC4-201ENST00000296273 POU5F1BQ06416 359 aa11.73□□□□□ -0.53
RFC4-201ENST00000296273 MXD4Q14582 209 aaPredicted RBP11.73□□□□□ -0.53
RFC4-201ENST00000296273 PPP4R3AQ6IN85 833 aa11.73□□□□□ -0.53
RFC4-201ENST00000296273 FERMT3Q86UX7 667 aa11.73□□□□□ -0.53
RFC4-201ENST00000296273 SMG8Q8ND04 991 aaKnown RBP11.73□□□□□ -0.53
RFC4-201ENST00000296273 NSUN7Q8NE18 718 aaKnown RBP11.73□□□□□ -0.53
RFC4-201ENST00000296273 GPT2Q8TD30 523 aa11.73□□□□□ -0.53
RFC4-201ENST00000296273 RSAD2Q8WXG1 361 aa11.73□□□□□ -0.53
RFC4-201ENST00000296273 TMEM143Q96AN5 459 aa11.73□□□□□ -0.53
RFC4-201ENST00000296273 MYADMQ96S97 322 aa11.73□□□□□ -0.53
RFC4-201ENST00000296273 LARP6Q9BRS8 491 aaKnown RBP11.73□□□□□ -0.53
RFC4-201ENST00000296273 NT5C3AQ9H0P0 336 aa11.73□□□□□ -0.53
RFC4-201ENST00000296273 TBC1D17Q9HA65 648 aa11.73□□□□□ -0.53
RFC4-201ENST00000296273 NCOA5Q9HCD5 579 aaKnown RBP11.73□□□□□ -0.53
RFC4-201ENST00000296273 KCNMB3Q9NPA1 279 aa11.73□□□□□ -0.53
RFC4-201ENST00000296273 FNIP2Q9P278 1114 aa11.73□□□□□ -0.53
RFC4-201ENST00000296273 CA14Q9ULX7 337 aa11.73□□□□□ -0.53
RFC4-201ENST00000296273 GIT1Q9Y2X7 761 aa11.73□□□□□ -0.53
RFC4-201ENST00000296273 SIT1Q9Y3P8 196 aa11.73□□□□□ -0.53
RFC4-201ENST00000296273 EML1O00423 815 aa11.72□□□□□ -0.53
RFC4-201ENST00000296273 LAMP2P13473 410 aa11.72□□□□□ -0.53
RFC4-201ENST00000296273 MLH1P40692 756 aa11.72□□□□□ -0.53
RFC4-201ENST00000296273 STK3Q13188 491 aa11.72□□□□□ -0.53
RFC4-201ENST00000296273 TFDP1Q14186 410 aa11.72□□□□□ -0.53
RFC4-201ENST00000296273 EMC2Q15006 297 aa11.72□□□□□ -0.53
RFC4-201ENST00000296273 EPHA7Q15375 998 aa11.72□□□□□ -0.53
RFC4-201ENST00000296273 INF2Q27J81 1249 aa11.72□□□□□ -0.53
RFC4-201ENST00000296273 USP41Q3LFD5 358 aa11.72□□□□□ -0.53
RFC4-201ENST00000296273 CCDC183Q5T5S1 534 aa11.72□□□□□ -0.53
RFC4-201ENST00000296273 LRSAM1Q6UWE0 723 aa11.72□□□□□ -0.53
RFC4-201ENST00000296273 TAS1R1Q7RTX1 841 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms