RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 GBA2Q9HCG7 927 aaPredicted RBP14.31□□□□□ -0.12
HPS3-201ENST00000296051 CCT8L1PA6NM43 557 aa14.31□□□□□ -0.12
HPS3-201ENST00000296051 INHBAP08476 426 aa14.31□□□□□ -0.12
HPS3-201ENST00000296051 TSTA3Q13630 321 aaPredicted RBP14.31□□□□□ -0.12
HPS3-201ENST00000296051 NAB2Q15742 525 aa14.31□□□□□ -0.12
HPS3-201ENST00000296051 KDM7AQ6ZMT4 941 aa14.31□□□□□ -0.12
HPS3-201ENST00000296051 MCPH1Q8NEM0 835 aa14.31□□□□□ -0.12
HPS3-201ENST00000296051 RNF139Q8WU17 664 aa14.31□□□□□ -0.12
HPS3-201ENST00000296051 C7orf25Q9BPX7 421 aa14.31□□□□□ -0.12
HPS3-201ENST00000296051 VWDEQ8N2E2 1590 aa14.31□□□□□ -0.12
HPS3-201ENST00000296051 TULP2O00295 520 aa14.31□□□□□ -0.12
HPS3-201ENST00000296051 GGPS1O95749 300 aa14.31□□□□□ -0.12
HPS3-201ENST00000296051 ITGA4P13612 1032 aa14.31□□□□□ -0.12
HPS3-201ENST00000296051 HSPA6P17066 643 aa14.31□□□□□ -0.12
HPS3-201ENST00000296051 KLRK1P26718 216 aa14.31□□□□□ -0.12
HPS3-201ENST00000296051 PHBP35232 272 aa14.31□□□□□ -0.12
HPS3-201ENST00000296051 PLA2G12BQ9BX93 195 aa14.31□□□□□ -0.12
HPS3-201ENST00000296051 SEMA6BQ9H3T3 888 aa14.31□□□□□ -0.12
HPS3-201ENST00000296051 L3MBTL1Q9Y468 752 aa14.31□□□□□ -0.12
HPS3-201ENST00000296051 CFAP69A5D8W1 941 aa14.3□□□□□ -0.12
HPS3-201ENST00000296051 GOLGA8RI6L899 631 aa14.3□□□□□ -0.12
HPS3-201ENST00000296051 SKIP12755 728 aa14.3□□□□□ -0.12
HPS3-201ENST00000296051 ANXA13P27216 316 aa14.3□□□□□ -0.12
HPS3-201ENST00000296051 PHKA2P46019 1235 aa14.3□□□□□ -0.12
HPS3-201ENST00000296051 BPIFB4P59827 614 aa14.3□□□□□ -0.12
HPS3-201ENST00000296051 SMAD1Q15797 465 aaKnown RBP14.3□□□□□ -0.12
HPS3-201ENST00000296051 CYFIP1Q7L576 1253 aa14.3□□□□□ -0.12
HPS3-201ENST00000296051 CREG2Q8IUH2 290 aa14.3□□□□□ -0.12
HPS3-201ENST00000296051 RHOT2Q8IXI1 618 aa14.3□□□□□ -0.12
HPS3-201ENST00000296051 PFDN4Q9NQP4 134 aa14.3□□□□□ -0.12
HPS3-201ENST00000296051 ADARB2Q9NS39 739 aaKnown RBP14.3□□□□□ -0.12
HPS3-201ENST00000296051 MTMR4Q9NYA4 1195 aa14.3□□□□□ -0.12
HPS3-201ENST00000296051 MROH2AA6NES4 1674 aa14.3□□□□□ -0.12
HPS3-201ENST00000296051 ZNF233A6NK53 670 aa14.3□□□□□ -0.12
HPS3-201ENST00000296051 ATMINO43313 823 aaPredicted RBP14.3□□□□□ -0.12
HPS3-201ENST00000296051 SREBF2Q12772 1141 aa14.3□□□□□ -0.12
HPS3-201ENST00000296051 PDE1CQ14123 709 aaPredicted RBP14.3□□□□□ -0.12
HPS3-201ENST00000296051 KYNUQ16719 465 aa14.3□□□□□ -0.12
HPS3-201ENST00000296051 ZNF568Q3ZCX4 644 aa14.3□□□□□ -0.12
HPS3-201ENST00000296051 PADI6Q6TGC4 694 aa14.3□□□□□ -0.12
HPS3-201ENST00000296051 GPRC5AQ8NFJ5 357 aa14.3□□□□□ -0.12
HPS3-201ENST00000296051 NUDT12Q9BQG2 462 aa14.3□□□□□ -0.12
HPS3-201ENST00000296051 TLR10Q9BXR5 811 aa14.3□□□□□ -0.12
HPS3-201ENST00000296051 ISCUQ9H1K1 167 aa14.3□□□□□ -0.12
HPS3-201ENST00000296051 POLLQ9UGP5 575 aa14.3□□□□□ -0.12
HPS3-201ENST00000296051 CPSF3Q9UKF6 684 aaKnown RBP14.3□□□□□ -0.12
HPS3-201ENST00000296051 GYG2O15488 501 aa14.3□□□□□ -0.12
HPS3-201ENST00000296051 CAND2O75155 1236 aa14.3□□□□□ -0.12
HPS3-201ENST00000296051 SAT1P21673 171 aa14.3□□□□□ -0.12
HPS3-201ENST00000296051 SIX6OS1Q8N1H7 587 aa14.3□□□□□ -0.12
HPS3-201ENST00000296051 RFFLQ8WZ73 363 aa14.3□□□□□ -0.12
HPS3-201ENST00000296051 HEXIM2Q96MH2 286 aaKnown RBP14.3□□□□□ -0.12
HPS3-201ENST00000296051 SPZ1Q9BXG8 430 aa14.3□□□□□ -0.12
HPS3-201ENST00000296051 ATP6V0A4Q9HBG4 840 aa14.3□□□□□ -0.12
HPS3-201ENST00000296051 GINM1Q9NU53 330 aa14.3□□□□□ -0.12
HPS3-201ENST00000296051 VIRMAQ69YN4 1812 aaKnown RBP14.3□□□□□ -0.12
HPS3-201ENST00000296051 SYNGAP1Q96PV0 1343 aa14.3□□□□□ -0.12
HPS3-201ENST00000296051 A6NJR5 290 aa14.3□□□□□ -0.12
HPS3-201ENST00000296051 IGF2BP3O00425 579 aaKnown RBP eCLIP14.3□□□□□ -0.12
HPS3-201ENST00000296051 WNT7AO00755 349 aa14.3□□□□□ -0.12
HPS3-201ENST00000296051 SLC4A1P02730 911 aa14.3□□□□□ -0.12
HPS3-201ENST00000296051 SCTRP47872 440 aa14.3□□□□□ -0.12
HPS3-201ENST00000296051 SLC12A2P55011 1212 aa14.3□□□□□ -0.12
HPS3-201ENST00000296051 GPC5P78333 572 aa14.3□□□□□ -0.12
HPS3-201ENST00000296051 LGSNQ5TDP6 509 aa14.3□□□□□ -0.12
HPS3-201ENST00000296051 PDZD4Q76G19 769 aaPredicted RBP14.3□□□□□ -0.12
HPS3-201ENST00000296051 ELOA2Q8IYF1 753 aaPredicted RBP14.3□□□□□ -0.12
HPS3-201ENST00000296051 CCHCR1Q8TD31 782 aa14.3□□□□□ -0.12
HPS3-201ENST00000296051 SKA2Q8WVK7 121 aaPredicted RBP14.3□□□□□ -0.12
HPS3-201ENST00000296051 LPAR1Q92633 364 aa14.3□□□□□ -0.12
HPS3-201ENST00000296051 TTC1Q99614 292 aa14.3□□□□□ -0.12
HPS3-201ENST00000296051 GEMIN8Q9NWZ8 242 aaKnown RBP14.29□□□□□ -0.12
HPS3-201ENST00000296051 WDR46O15213 610 aaKnown RBP14.29□□□□□ -0.12
HPS3-201ENST00000296051 MT-ND3P03897 115 aa14.29□□□□□ -0.12
HPS3-201ENST00000296051 QARSP47897 775 aaKnown RBP14.29□□□□□ -0.12
HPS3-201ENST00000296051 NT5C2P49902 561 aa14.29□□□□□ -0.12
HPS3-201ENST00000296051 TTMPQ5BVD1 217 aa14.29□□□□□ -0.12
HPS3-201ENST00000296051 NT5DC1Q5TFE4 455 aa14.29□□□□□ -0.12
HPS3-201ENST00000296051 PPP4R3CPQ6ZMV5 832 aa14.29□□□□□ -0.12
HPS3-201ENST00000296051 ARMCX2Q7L311 632 aa14.29□□□□□ -0.12
HPS3-201ENST00000296051 SPATA21Q7Z572 469 aa14.29□□□□□ -0.12
HPS3-201ENST00000296051 ADGRA1Q86SQ6 560 aa14.29□□□□□ -0.12
HPS3-201ENST00000296051 ORC4O43929 436 aa14.29□□□□□ -0.12
HPS3-201ENST00000296051 OR6B2Q6IFH4 312 aa14.29□□□□□ -0.12
HPS3-201ENST00000296051 SLC30A5Q8TAD4 765 aa14.29□□□□□ -0.12
HPS3-201ENST00000296051 VCPKMTQ9H867 229 aa14.29□□□□□ -0.12
HPS3-201ENST00000296051 MAGED2Q9UNF1 606 aaPredicted RBP14.29□□□□□ -0.12
HPS3-201ENST00000296051 H7C0C1 242 aa14.29□□□□□ -0.12
HPS3-201ENST00000296051 SLC16A4O15374 487 aa14.29□□□□□ -0.12
HPS3-201ENST00000296051 PFDN1O60925 122 aa14.29□□□□□ -0.12
HPS3-201ENST00000296051 KRT1P04264 644 aa14.29□□□□□ -0.12
HPS3-201ENST00000296051 ATP5OP48047 213 aa14.29□□□□□ -0.12
HPS3-201ENST00000296051 PRELPP51888 382 aa14.29□□□□□ -0.12
HPS3-201ENST00000296051 SPARCL1Q14515 664 aa14.29□□□□□ -0.12
HPS3-201ENST00000296051 KLHDC7AQ5VTJ3 777 aa14.29□□□□□ -0.12
HPS3-201ENST00000296051 C4orf33Q8N1A6 199 aa14.29□□□□□ -0.12
HPS3-201ENST00000296051 NUP85Q9BW27 656 aa14.29□□□□□ -0.12
HPS3-201ENST00000296051 SLC12A6Q9UHW9 1150 aa14.29□□□□□ -0.12
HPS3-201ENST00000296051 TMEM120BA0PK00 339 aa14.28□□□□□ -0.12
HPS3-201ENST00000296051 STAT5BP51692 787 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms