RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 KRT84Q9NSB2 600 aa13.13□□□□□ -0.31
SLX4-201ENST00000294008 FBXO10Q9UK96 956 aa13.13□□□□□ -0.31
SLX4-201ENST00000294008 PCDHGA3Q9Y5H0 932 aa13.13□□□□□ -0.31
SLX4-201ENST00000294008 ARHGAP15Q53QZ3 475 aa13.13□□□□□ -0.31
SLX4-201ENST00000294008 TUBB6Q9BUF5 446 aa13.13□□□□□ -0.31
SLX4-201ENST00000294008 DIABLOQ9NR28 239 aa13.13□□□□□ -0.31
SLX4-201ENST00000294008 EPN1Q9Y6I3 576 aaPredicted RBP13.13□□□□□ -0.31
SLX4-201ENST00000294008 CCDC15Q0P6D6 951 aa13.13□□□□□ -0.31
SLX4-201ENST00000294008 RCN1Q15293 331 aa13.13□□□□□ -0.31
SLX4-201ENST00000294008 DDI2Q5TDH0 399 aa13.13□□□□□ -0.31
SLX4-201ENST00000294008 PIK3R5Q8WYR1 880 aa13.13□□□□□ -0.31
SLX4-201ENST00000294008 PGBD4Q96DM1 585 aa13.13□□□□□ -0.31
SLX4-201ENST00000294008 ZMYND12Q9H0C1 365 aa13.13□□□□□ -0.31
SLX4-201ENST00000294008 EML4Q9HC35 981 aaKnown RBP13.13□□□□□ -0.31
SLX4-201ENST00000294008 ALG13Q9NP73 1137 aaKnown RBP13.13□□□□□ -0.31
SLX4-201ENST00000294008 A0A087WWV3 80 aa13.13□□□□□ -0.31
SLX4-201ENST00000294008 F8W810 466 aa13.13□□□□□ -0.31
SLX4-201ENST00000294008 NDUFS3O75489 264 aa13.13□□□□□ -0.31
SLX4-201ENST00000294008 CASP14P31944 242 aa13.13□□□□□ -0.31
SLX4-201ENST00000294008 ZRANB3Q5FWF4 1079 aa13.13□□□□□ -0.31
SLX4-201ENST00000294008 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.13□□□□□ -0.31
SLX4-201ENST00000294008 BBS7Q8IWZ6 715 aa13.13□□□□□ -0.31
SLX4-201ENST00000294008 OTUD7AQ8TE49 926 aaPredicted RBP13.13□□□□□ -0.31
SLX4-201ENST00000294008 GCOM2Q9BZD3 368 aaPredicted RBP13.13□□□□□ -0.31
SLX4-201ENST00000294008 BTBD18B2RXH4 712 aa13.13□□□□□ -0.31
SLX4-201ENST00000294008 PGRMC1O00264 195 aaKnown RBP13.13□□□□□ -0.31
SLX4-201ENST00000294008 NFIBO00712 420 aa13.13□□□□□ -0.31
SLX4-201ENST00000294008 ANGPT2O15123 496 aa13.13□□□□□ -0.31
SLX4-201ENST00000294008 SEC31AO94979 1220 aaKnown RBP13.13□□□□□ -0.31
SLX4-201ENST00000294008 CHI3L1P36222 383 aaPredicted RBP13.13□□□□□ -0.31
SLX4-201ENST00000294008 TTLL4Q14679 1199 aa13.13□□□□□ -0.31
SLX4-201ENST00000294008 POTEEQ6S8J3 1075 aa13.13□□□□□ -0.31
SLX4-201ENST00000294008 CACUL1Q86Y37 369 aa13.13□□□□□ -0.31
SLX4-201ENST00000294008 OXCT2Q9BYC2 517 aaPredicted RBP13.13□□□□□ -0.31
SLX4-201ENST00000294008 ERICH3Q5RHP9 1530 aa13.13□□□□□ -0.31
SLX4-201ENST00000294008 CHURC1-FNTBB4DL54 471 aa13.13□□□□□ -0.31
SLX4-201ENST00000294008 SASH1O94885 1247 aa13.13□□□□□ -0.31
SLX4-201ENST00000294008 CDC25AP30304 524 aa13.13□□□□□ -0.31
SLX4-201ENST00000294008 PMS2P54278 862 aa13.13□□□□□ -0.31
SLX4-201ENST00000294008 CDC37Q16543 378 aaPredicted RBP13.13□□□□□ -0.31
SLX4-201ENST00000294008 ASPRV1Q53RT3 343 aa13.13□□□□□ -0.31
SLX4-201ENST00000294008 CCDC60Q8IWA6 550 aaPredicted RBP13.13□□□□□ -0.31
SLX4-201ENST00000294008 PLEKHM2Q8IWE5 1019 aa13.13□□□□□ -0.31
SLX4-201ENST00000294008 ELAC2Q9BQ52 826 aaKnown RBP13.13□□□□□ -0.31
SLX4-201ENST00000294008 ADAM22Q9P0K1 906 aa13.13□□□□□ -0.31
SLX4-201ENST00000294008 ZFP69BQ9UJL9 534 aa13.13□□□□□ -0.31
SLX4-201ENST00000294008 USP17L3A6NCW0 530 aa13.12□□□□□ -0.31
SLX4-201ENST00000294008 USP17L4A6NCW7 530 aa13.12□□□□□ -0.31
SLX4-201ENST00000294008 KRT33AO76009 404 aa13.12□□□□□ -0.31
SLX4-201ENST00000294008 FAM107AO95990 144 aa13.12□□□□□ -0.31
SLX4-201ENST00000294008 IL10P22301 178 aa13.12□□□□□ -0.31
SLX4-201ENST00000294008 MTMR1Q13613 665 aa13.12□□□□□ -0.31
SLX4-201ENST00000294008 USP17L1Q7RTZ2 530 aa13.12□□□□□ -0.31
SLX4-201ENST00000294008 PLEKHA5Q9HAU0 1116 aa13.12□□□□□ -0.31
SLX4-201ENST00000294008 ADGRL1O94910 1474 aa13.12□□□□□ -0.31
SLX4-201ENST00000294008 GSTM1P09488 218 aa13.12□□□□□ -0.31
SLX4-201ENST00000294008 ARL4CP56559 192 aa13.12□□□□□ -0.31
SLX4-201ENST00000294008 FAM83BQ5T0W9 1011 aa13.12□□□□□ -0.31
SLX4-201ENST00000294008 PID1Q7Z2X4 250 aa13.12□□□□□ -0.31
SLX4-201ENST00000294008 PITPNM3Q9BZ71 974 aa13.12□□□□□ -0.31
SLX4-201ENST00000294008 GPC1P35052 558 aa13.12□□□□□ -0.31
SLX4-201ENST00000294008 AP2B1P63010 937 aa13.12□□□□□ -0.31
SLX4-201ENST00000294008 PNMA5Q96PV4 448 aa13.12□□□□□ -0.31
SLX4-201ENST00000294008 STAP1Q9ULZ2 295 aa13.12□□□□□ -0.31
SLX4-201ENST00000294008 SLC30A1Q9Y6M5 507 aa13.12□□□□□ -0.31
SLX4-201ENST00000294008 XDHP47989 1333 aa13.12□□□□□ -0.31
SLX4-201ENST00000294008 SDC4P31431 198 aa13.12□□□□□ -0.31
SLX4-201ENST00000294008 ST13P50502 369 aaKnown RBP13.12□□□□□ -0.31
SLX4-201ENST00000294008 SPATA1Q5VX52 437 aa13.12□□□□□ -0.31
SLX4-201ENST00000294008 LRRC8BQ6P9F7 803 aa13.12□□□□□ -0.31
SLX4-201ENST00000294008 SLC35F6Q8N357 371 aa13.12□□□□□ -0.31
SLX4-201ENST00000294008 CCDC51Q96ER9 411 aa13.12□□□□□ -0.31
SLX4-201ENST00000294008 ZNF302Q9NR11 478 aa13.12□□□□□ -0.31
SLX4-201ENST00000294008 CLIC4Q9Y696 253 aa13.12□□□□□ -0.31
SLX4-201ENST00000294008 TBC1D4O60343 1298 aa13.12□□□□□ -0.31
SLX4-201ENST00000294008 RPN2P04844 631 aa13.12□□□□□ -0.31
SLX4-201ENST00000294008 RUNX1T1Q06455 604 aa13.12□□□□□ -0.31
SLX4-201ENST00000294008 HDAC1Q13547 482 aaPredicted RBP13.12□□□□□ -0.31
SLX4-201ENST00000294008 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.12□□□□□ -0.31
SLX4-201ENST00000294008 ALDH1A3P47895 512 aa13.12□□□□□ -0.31
SLX4-201ENST00000294008 GRAMD1CQ8IYS0 662 aa13.12□□□□□ -0.31
SLX4-201ENST00000294008 PMM1Q92871 262 aa13.12□□□□□ -0.31
SLX4-201ENST00000294008 DYNLL2Q96FJ2 89 aa13.12□□□□□ -0.31
SLX4-201ENST00000294008 ORAI2Q96SN7 254 aa13.12□□□□□ -0.31
SLX4-201ENST00000294008 SPACA6W5XKT8 324 aa13.12□□□□□ -0.31
SLX4-201ENST00000294008 FCER1AP12319 257 aa13.11□□□□□ -0.31
SLX4-201ENST00000294008 GUCY1A2P33402 732 aa13.11□□□□□ -0.31
SLX4-201ENST00000294008 C6orf118Q5T5N4 469 aa13.11□□□□□ -0.31
SLX4-201ENST00000294008 TTC23Q5W5X9 447 aa13.11□□□□□ -0.31
SLX4-201ENST00000294008 DNAJC1Q96KC8 554 aaKnown RBP13.11□□□□□ -0.31
SLX4-201ENST00000294008 GPR63Q9BZJ6 419 aa13.11□□□□□ -0.31
SLX4-201ENST00000294008 ANAPC2Q9UJX6 822 aa13.11□□□□□ -0.31
SLX4-201ENST00000294008 LRRIQ3A6PVS8 624 aaPredicted RBP13.11□□□□□ -0.31
SLX4-201ENST00000294008 TK2O00142 265 aa13.11□□□□□ -0.31
SLX4-201ENST00000294008 C6orf222P0C671 652 aaPredicted RBP13.11□□□□□ -0.31
SLX4-201ENST00000294008 TAF13Q15543 124 aa13.11□□□□□ -0.31
SLX4-201ENST00000294008 TBC1D9BQ66K14 1250 aa13.11□□□□□ -0.31
SLX4-201ENST00000294008 SPIRE2Q8WWL2 714 aa13.11□□□□□ -0.31
SLX4-201ENST00000294008 SPTLC3Q9NUV7 552 aa13.11□□□□□ -0.31
SLX4-201ENST00000294008 MRPL39Q9NYK5 338 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms