RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 ENTPD3O75355 529 aa17.03■□□□□ 0.32
SMAD6-201ENST00000288840 GJB6O95452 261 aa17.03■□□□□ 0.32
SMAD6-201ENST00000288840 PYGMP11217 842 aa17.03■□□□□ 0.32
SMAD6-201ENST00000288840 IFI35P80217 286 aaPredicted RBP17.03■□□□□ 0.32
SMAD6-201ENST00000288840 PPP2R5EQ16537 467 aa17.03■□□□□ 0.32
SMAD6-201ENST00000288840 SAMD7Q7Z3H4 446 aa17.03■□□□□ 0.32
SMAD6-201ENST00000288840 VSIG1Q86XK7 387 aa17.03■□□□□ 0.32
SMAD6-201ENST00000288840 SIAH1Q8IUQ4 282 aa17.03■□□□□ 0.32
SMAD6-201ENST00000288840 RAPGEF5Q92565 580 aa17.03■□□□□ 0.32
SMAD6-201ENST00000288840 RPAP3Q9H6T3 665 aaPredicted RBP17.03■□□□□ 0.32
SMAD6-201ENST00000288840 GLI3P10071 1580 aa17.02■□□□□ 0.32
SMAD6-201ENST00000288840 ITGB5P18084 799 aa17.02■□□□□ 0.32
SMAD6-201ENST00000288840 HMGCS2P54868 508 aa17.02■□□□□ 0.32
SMAD6-201ENST00000288840 FLAD1Q8NFF5 587 aa17.02■□□□□ 0.32
SMAD6-201ENST00000288840 LBHD1Q9BQE6 289 aaPredicted RBP17.02■□□□□ 0.32
SMAD6-201ENST00000288840 ODF2LQ9ULJ1 636 aa17.02■□□□□ 0.32
SMAD6-201ENST00000288840 EIF3DO15371 548 aaKnown RBP eCLIP17.02■□□□□ 0.32
SMAD6-201ENST00000288840 PLS3P13797 630 aa17.02■□□□□ 0.32
SMAD6-201ENST00000288840 MMS22LQ6ZRQ5 1243 aa17.02■□□□□ 0.32
SMAD6-201ENST00000288840 THNSL1Q8IYQ7 743 aa17.02■□□□□ 0.32
SMAD6-201ENST00000288840 ARHGEF2Q92974 986 aaKnown RBP17.02■□□□□ 0.32
SMAD6-201ENST00000288840 HAUS2Q9NVX0 235 aa17.02■□□□□ 0.32
SMAD6-201ENST00000288840 TMX2Q9Y320 296 aa17.02■□□□□ 0.32
SMAD6-201ENST00000288840 IKBKGQ9Y6K9 419 aa17.02■□□□□ 0.32
SMAD6-201ENST00000288840 EIF4E1BA6NMX2 242 aaKnown RBP17.02■□□□□ 0.31
SMAD6-201ENST00000288840 FOXO6A8MYZ6 492 aa17.02■□□□□ 0.31
SMAD6-201ENST00000288840 RTN2O75298 545 aa17.02■□□□□ 0.31
SMAD6-201ENST00000288840 PSMD10O75832 226 aa17.02■□□□□ 0.31
SMAD6-201ENST00000288840 ITIH3Q06033 890 aa17.02■□□□□ 0.31
SMAD6-201ENST00000288840 TKFCQ3LXA3 575 aa17.02■□□□□ 0.31
SMAD6-201ENST00000288840 KDM7AQ6ZMT4 941 aa17.02■□□□□ 0.31
SMAD6-201ENST00000288840 ATG4CQ96DT6 458 aa17.02■□□□□ 0.31
SMAD6-201ENST00000288840 LRRD1A4D1F6 860 aa17.01■□□□□ 0.31
SMAD6-201ENST00000288840 MIF4GDA9UHW6 222 aaKnown RBP17.01■□□□□ 0.31
SMAD6-201ENST00000288840 LCA5LO95447 670 aa17.01■□□□□ 0.31
SMAD6-201ENST00000288840 EZRP15311 586 aaKnown RBP17.01■□□□□ 0.31
SMAD6-201ENST00000288840 PSMC5P62195 406 aa17.01■□□□□ 0.31
SMAD6-201ENST00000288840 COBLL1Q53SF7 1204 aa17.01■□□□□ 0.31
SMAD6-201ENST00000288840 MOXD1Q6UVY6 613 aa17.01■□□□□ 0.31
SMAD6-201ENST00000288840 PRUNE1Q86TP1 453 aa17.01■□□□□ 0.31
SMAD6-201ENST00000288840 FAM151AQ8WW52 585 aa17.01■□□□□ 0.31
SMAD6-201ENST00000288840 ATP6V0A1Q93050 837 aa17.01■□□□□ 0.31
SMAD6-201ENST00000288840 MKL1Q969V6 931 aa17.01■□□□□ 0.31
SMAD6-201ENST00000288840 LENG9Q96B70 501 aa17.01■□□□□ 0.31
SMAD6-201ENST00000288840 PWWP2AQ96N64 755 aa17.01■□□□□ 0.31
SMAD6-201ENST00000288840 SPDYE2BA6NHP3 402 aa17.01■□□□□ 0.31
SMAD6-201ENST00000288840 SPDYE6P0CI01 402 aa17.01■□□□□ 0.31
SMAD6-201ENST00000288840 RARRES1P49788 294 aa17.01■□□□□ 0.31
SMAD6-201ENST00000288840 PPP2R5AQ15172 486 aa17.01■□□□□ 0.31
SMAD6-201ENST00000288840 AKT1S1Q96B36 256 aa17.01■□□□□ 0.31
SMAD6-201ENST00000288840 SEC16BQ96JE7 1060 aa17.01■□□□□ 0.31
SMAD6-201ENST00000288840 CALR3Q96L12 384 aaKnown RBP17.01■□□□□ 0.31
SMAD6-201ENST00000288840 RAB20Q9NX57 234 aa17.01■□□□□ 0.31
SMAD6-201ENST00000288840 CEP83Q9Y592 693 aa17.01■□□□□ 0.31
SMAD6-201ENST00000288840 CACNA1SQ13698 1873 aa17.01■□□□□ 0.31
SMAD6-201ENST00000288840 SGK1O00141 431 aa17.01■□□□□ 0.31
SMAD6-201ENST00000288840 SPAG7O75391 227 aa17.01■□□□□ 0.31
SMAD6-201ENST00000288840 ZBTB16Q05516 673 aa17.01■□□□□ 0.31
SMAD6-201ENST00000288840 MAPK7Q13164 816 aa17.01■□□□□ 0.31
SMAD6-201ENST00000288840 RSBN1LQ6PCB5 846 aaPredicted RBP17.01■□□□□ 0.31
SMAD6-201ENST00000288840 WRNIP1Q96S55 665 aa17.01■□□□□ 0.31
SMAD6-201ENST00000288840 IDI2Q9BXS1 227 aa17.01■□□□□ 0.31
SMAD6-201ENST00000288840 CYP3A7-CYP3A51PA0A087WV96 503 aa17■□□□□ 0.31
SMAD6-201ENST00000288840 ANKRD63C9JTQ0 380 aa17■□□□□ 0.31
SMAD6-201ENST00000288840 NOP56O00567 594 aaKnown RBP17■□□□□ 0.31
SMAD6-201ENST00000288840 ATP9AO75110 1047 aa17■□□□□ 0.31
SMAD6-201ENST00000288840 FAM107AO95990 144 aa17■□□□□ 0.31
SMAD6-201ENST00000288840 CYP3A7P24462 503 aa17■□□□□ 0.31
SMAD6-201ENST00000288840 CHRNA3P32297 505 aa17■□□□□ 0.31
SMAD6-201ENST00000288840 TMC3Q7Z5M5 1100 aa17■□□□□ 0.31
SMAD6-201ENST00000288840 NOP9Q86U38 636 aaKnown RBP17■□□□□ 0.31
SMAD6-201ENST00000288840 NCAPG2Q86XI2 1143 aa17■□□□□ 0.31
SMAD6-201ENST00000288840 GMCL1P1Q8NEA9 526 aa17■□□□□ 0.31
SMAD6-201ENST00000288840 SLC7A3Q8WY07 619 aa17■□□□□ 0.31
SMAD6-201ENST00000288840 ZWILCHQ9H900 591 aa17■□□□□ 0.31
SMAD6-201ENST00000288840 TCRBV7S2A1N4TA0A589 114 aa17■□□□□ 0.31
SMAD6-201ENST00000288840 PIK3R2O00459 728 aa17■□□□□ 0.31
SMAD6-201ENST00000288840 HOXA7P31268 230 aaPredicted RBP17■□□□□ 0.31
SMAD6-201ENST00000288840 HSPA9P38646 679 aaKnown RBP17■□□□□ 0.31
SMAD6-201ENST00000288840 SPIRE1Q08AE8 756 aa17■□□□□ 0.31
SMAD6-201ENST00000288840 HYIQ5T013 277 aa17■□□□□ 0.31
SMAD6-201ENST00000288840 CCDC63Q8NA47 563 aa17■□□□□ 0.31
SMAD6-201ENST00000288840 GADD45GIP1Q8TAE8 222 aaPredicted RBP17■□□□□ 0.31
SMAD6-201ENST00000288840 ZKSCAN4Q969J2 545 aaPredicted RBP17■□□□□ 0.31
SMAD6-201ENST00000288840 HVCN1Q96D96 273 aa17■□□□□ 0.31
SMAD6-201ENST00000288840 CHMP6Q96FZ7 201 aa17■□□□□ 0.31
SMAD6-201ENST00000288840 CARD9Q9H257 536 aa17■□□□□ 0.31
SMAD6-201ENST00000288840 ATP2A1O14983 1001 aa17■□□□□ 0.31
SMAD6-201ENST00000288840 HNRNPH1P31943 449 aaKnown RBP17■□□□□ 0.31
SMAD6-201ENST00000288840 NAA25Q14CX7 972 aa17■□□□□ 0.31
SMAD6-201ENST00000288840 SMAD1Q15797 465 aaKnown RBP17■□□□□ 0.31
SMAD6-201ENST00000288840 MSTO1Q9BUK6 570 aa17■□□□□ 0.31
SMAD6-201ENST00000288840 POLR3FQ9H1D9 316 aaPredicted RBP17■□□□□ 0.31
SMAD6-201ENST00000288840 CD248Q9HCU0 757 aa17■□□□□ 0.31
SMAD6-201ENST00000288840 MKNK1Q9BUB5 465 aa16.99■□□□□ 0.31
SMAD6-201ENST00000288840 TRIM7Q9C029 511 aa16.99■□□□□ 0.31
SMAD6-201ENST00000288840 INO80B-WBP1J3KQ70 363 aa16.99■□□□□ 0.31
SMAD6-201ENST00000288840 TULP2O00295 520 aa16.99■□□□□ 0.31
SMAD6-201ENST00000288840 PODXLO00592 558 aa16.99■□□□□ 0.31
SMAD6-201ENST00000288840 PHF2O75151 1096 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms