RNA–Protein interactions for RNA: ENST00000288462.4

C9orf43-201, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-201ENST00000288462 GH1P01241 217 aa11.02□□□□□ -0.65
C9orf43-201ENST00000288462 CTAGE8P0CG41 777 aa11.02□□□□□ -0.65
C9orf43-201ENST00000288462 NLRP11P59045 1033 aaKnown RBP11.02□□□□□ -0.65
C9orf43-201ENST00000288462 LAMTOR4Q0VGL1 99 aa11.02□□□□□ -0.65
C9orf43-201ENST00000288462 MXD4Q14582 209 aaPredicted RBP11.02□□□□□ -0.65
C9orf43-201ENST00000288462 ARHGAP44Q17R89 818 aa11.02□□□□□ -0.65
C9orf43-201ENST00000288462 CRELD2Q6UXH1 353 aaPredicted RBP11.02□□□□□ -0.65
C9orf43-201ENST00000288462 CTAGE6Q86UF2 777 aa11.02□□□□□ -0.65
C9orf43-201ENST00000288462 CTAGE4Q8IX94 777 aa11.02□□□□□ -0.65
C9orf43-201ENST00000288462 FBXL13Q8NEE6 735 aa11.02□□□□□ -0.65
C9orf43-201ENST00000288462 KREMEN1Q96MU8 473 aa11.02□□□□□ -0.65
C9orf43-201ENST00000288462 POP1Q99575 1024 aaKnown RBP11.02□□□□□ -0.65
C9orf43-201ENST00000288462 TARS2Q9BW92 718 aaKnown RBP11.02□□□□□ -0.65
C9orf43-201ENST00000288462 NCANO14594 1321 aa11.01□□□□□ -0.65
C9orf43-201ENST00000288462 A0A0A6YYK5 440 aaPredicted RBP11.01□□□□□ -0.65
C9orf43-201ENST00000288462 BUB1O43683 1085 aa11.01□□□□□ -0.65
C9orf43-201ENST00000288462 RRP9O43818 475 aaKnown RBP11.01□□□□□ -0.65
C9orf43-201ENST00000288462 ZSCAN20P17040 1043 aaPredicted RBP11.01□□□□□ -0.65
C9orf43-201ENST00000288462 MAPK4P31152 587 aa11.01□□□□□ -0.65
C9orf43-201ENST00000288462 CKAP4Q07065 602 aaKnown RBP11.01□□□□□ -0.65
C9orf43-201ENST00000288462 CST9Q5W186 159 aa11.01□□□□□ -0.65
C9orf43-201ENST00000288462 SV2AQ7L0J3 742 aa11.01□□□□□ -0.65
C9orf43-201ENST00000288462 PLEKHH3Q7Z736 793 aa11.01□□□□□ -0.65
C9orf43-201ENST00000288462 PPTC7Q8NI37 304 aa11.01□□□□□ -0.65
C9orf43-201ENST00000288462 HELQQ8TDG4 1101 aa11.01□□□□□ -0.65
C9orf43-201ENST00000288462 TAS1R2Q8TE23 839 aa11.01□□□□□ -0.65
C9orf43-201ENST00000288462 SHC3Q92529 594 aa11.01□□□□□ -0.65
C9orf43-201ENST00000288462 MAML3Q96JK9 1138 aa11.01□□□□□ -0.65
C9orf43-201ENST00000288462 ERAP1Q9NZ08 941 aa11.01□□□□□ -0.65
C9orf43-201ENST00000288462 TSKSQ9UJT2 592 aa11.01□□□□□ -0.65
C9orf43-201ENST00000288462 TRPC6Q9Y210 931 aa11.01□□□□□ -0.65
C9orf43-201ENST00000288462 HYOU1Q9Y4L1 999 aa11.01□□□□□ -0.65
C9orf43-201ENST00000288462 ANK1P16157 1881 aa11.01□□□□□ -0.65
C9orf43-201ENST00000288462 GRID2IPA4D2P6 1211 aa11□□□□□ -0.65
C9orf43-201ENST00000288462 MSCO60682 206 aa11□□□□□ -0.65
C9orf43-201ENST00000288462 SRGAP2O75044 1071 aa11□□□□□ -0.65
C9orf43-201ENST00000288462 ZC3H11AO75152 810 aaKnown RBP eCLIP11□□□□□ -0.65
C9orf43-201ENST00000288462 SNAI1O95863 264 aaPredicted RBP11□□□□□ -0.65
C9orf43-201ENST00000288462 LDHAP00338 332 aaKnown RBP11□□□□□ -0.65
C9orf43-201ENST00000288462 LGALS2P05162 132 aa11□□□□□ -0.65
C9orf43-201ENST00000288462 H2AFZP0C0S5 128 aa11□□□□□ -0.65
C9orf43-201ENST00000288462 DLATP10515 647 aaKnown RBP11□□□□□ -0.65
C9orf43-201ENST00000288462 TCP1P17987 556 aaKnown RBP11□□□□□ -0.65
C9orf43-201ENST00000288462 WNT7BP56706 349 aa11□□□□□ -0.65
C9orf43-201ENST00000288462 GJC2Q5T442 439 aaPredicted RBP11□□□□□ -0.65
C9orf43-201ENST00000288462 H2AFVQ71UI9 128 aa11□□□□□ -0.65
C9orf43-201ENST00000288462 ZNF572Q7Z3I7 529 aaPredicted RBP11□□□□□ -0.65
C9orf43-201ENST00000288462 GLYCTKQ8IVS8 523 aa11□□□□□ -0.65
C9orf43-201ENST00000288462 FAM71AQ8IYT1 594 aa11□□□□□ -0.65
C9orf43-201ENST00000288462 LRRC71Q8N4P6 559 aa11□□□□□ -0.65
C9orf43-201ENST00000288462 MSANTD4Q8NCY6 345 aa11□□□□□ -0.65
C9orf43-201ENST00000288462 U2AF1L4Q8WU68 220 aaKnown RBP11□□□□□ -0.65
C9orf43-201ENST00000288462 KAT5Q92993 513 aa11□□□□□ -0.65
C9orf43-201ENST00000288462 ZBTB45Q96K62 511 aaPredicted RBP11□□□□□ -0.65
C9orf43-201ENST00000288462 RPGRIP1Q96KN7 1286 aa11□□□□□ -0.65
C9orf43-201ENST00000288462 NT5C1BQ96P26 610 aa11□□□□□ -0.65
C9orf43-201ENST00000288462 MSTO1Q9BUK6 570 aa11□□□□□ -0.65
C9orf43-201ENST00000288462 TLR10Q9BXR5 811 aa11□□□□□ -0.65
C9orf43-201ENST00000288462 C2orf40Q9H1Z8 148 aa11□□□□□ -0.65
C9orf43-201ENST00000288462 RAB20Q9NX57 234 aa11□□□□□ -0.65
C9orf43-201ENST00000288462 COL1A2P08123 1366 aa11□□□□□ -0.65
C9orf43-201ENST00000288462 PTPRJQ12913 1337 aa11□□□□□ -0.65
C9orf43-201ENST00000288462 FAM189A1O60320 539 aa11□□□□□ -0.65
C9orf43-201ENST00000288462 PALMO75781 387 aa11□□□□□ -0.65
C9orf43-201ENST00000288462 C22orf31O95567 290 aa11□□□□□ -0.65
C9orf43-201ENST00000288462 ITGBL1O95965 494 aaPredicted RBP11□□□□□ -0.65
C9orf43-201ENST00000288462 HOXD8P13378 290 aaPredicted RBP11□□□□□ -0.65
C9orf43-201ENST00000288462 MFAP3P55082 362 aa11□□□□□ -0.65
C9orf43-201ENST00000288462 ZACNQ401N2 412 aa11□□□□□ -0.65
C9orf43-201ENST00000288462 ZNF484Q5JVG2 852 aa11□□□□□ -0.65
C9orf43-201ENST00000288462 RASAL3Q86YV0 1011 aa11□□□□□ -0.65
C9orf43-201ENST00000288462 ZBTB8OSQ8IWT0 167 aa11□□□□□ -0.65
C9orf43-201ENST00000288462 TRAPPC12Q8WVT3 735 aa11□□□□□ -0.65
C9orf43-201ENST00000288462 ZNF516Q92618 1163 aa11□□□□□ -0.65
C9orf43-201ENST00000288462 OSBPL9Q96SU4 736 aa11□□□□□ -0.65
C9orf43-201ENST00000288462 MMS19Q96T76 1030 aa11□□□□□ -0.65
C9orf43-201ENST00000288462 AGPAT1Q99943 283 aa11□□□□□ -0.65
C9orf43-201ENST00000288462 MRPL4Q9BYD3 311 aaKnown RBP11□□□□□ -0.65
C9orf43-201ENST00000288462 PDCL3Q9H2J4 239 aa11□□□□□ -0.65
C9orf43-201ENST00000288462 ZCCHC17Q9NP64 241 aaKnown RBP11□□□□□ -0.65
C9orf43-201ENST00000288462 RBAKQ9NYW8 714 aaPredicted RBP11□□□□□ -0.65
C9orf43-201ENST00000288462 ANKFY1Q9P2R3 1169 aa11□□□□□ -0.65
C9orf43-201ENST00000288462 SUCLA2Q9P2R7 463 aaPredicted RBP11□□□□□ -0.65
C9orf43-201ENST00000288462 EVPLQ92817 2033 aa11□□□□□ -0.65
C9orf43-201ENST00000288462 CNTNAP2Q9UHC6 1331 aa10.99□□□□□ -0.65
C9orf43-201ENST00000288462 SLC15A5A6NIM6 579 aa10.99□□□□□ -0.65
C9orf43-201ENST00000288462 TTLL13PA6NNM8 815 aa10.99□□□□□ -0.65
C9orf43-201ENST00000288462 ABLIM1O14639 778 aa10.99□□□□□ -0.65
C9orf43-201ENST00000288462 TOM1L1O75674 476 aa10.99□□□□□ -0.65
C9orf43-201ENST00000288462 PRKCBP05771 671 aa10.99□□□□□ -0.65
C9orf43-201ENST00000288462 ADCYAP1R1P41586 468 aa10.99□□□□□ -0.65
C9orf43-201ENST00000288462 ACOT2P49753 483 aa10.99□□□□□ -0.65
C9orf43-201ENST00000288462 GCNT1Q02742 428 aa10.99□□□□□ -0.65
C9orf43-201ENST00000288462 IFI16Q16666 785 aaKnown RBP10.99□□□□□ -0.65
C9orf43-201ENST00000288462 ZBTB41Q5SVQ8 909 aa10.99□□□□□ -0.65
C9orf43-201ENST00000288462 PPM1KQ8N3J5 372 aa10.99□□□□□ -0.65
C9orf43-201ENST00000288462 MSL3Q8N5Y2 521 aaKnown RBP10.99□□□□□ -0.65
C9orf43-201ENST00000288462 LINC01465Q8N7H1 131 aa10.99□□□□□ -0.65
C9orf43-201ENST00000288462 LRRC57Q8N9N7 239 aa10.99□□□□□ -0.65
C9orf43-201ENST00000288462 RNF149Q8NC42 400 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms