RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 PLCB3Q01970 1234 aa10.11□□□□□ -0.79
HMGN1-201ENST00000288344 DNM1Q05193 864 aaKnown RBP10.11□□□□□ -0.79
HMGN1-201ENST00000288344 MCM6Q14566 821 aa10.11□□□□□ -0.79
HMGN1-201ENST00000288344 NAB2Q15742 525 aa10.11□□□□□ -0.79
HMGN1-201ENST00000288344 XKR4Q5GH76 650 aa10.11□□□□□ -0.79
HMGN1-201ENST00000288344 EEF1DP3Q658K8 133 aa10.11□□□□□ -0.79
HMGN1-201ENST00000288344 CNNM4Q6P4Q7 775 aa10.11□□□□□ -0.79
HMGN1-201ENST00000288344 ALKAL1Q6UXT8 129 aa10.11□□□□□ -0.79
HMGN1-201ENST00000288344 RSPH1Q8WYR4 309 aa10.11□□□□□ -0.79
HMGN1-201ENST00000288344 MRPL38Q96DV4 380 aaKnown RBP10.11□□□□□ -0.79
HMGN1-201ENST00000288344 REEP2Q9BRK0 252 aa10.11□□□□□ -0.79
HMGN1-201ENST00000288344 HAPLN2Q9GZV7 340 aa10.11□□□□□ -0.79
HMGN1-201ENST00000288344 PDZD7Q9H5P4 517 aa10.11□□□□□ -0.79
HMGN1-201ENST00000288344 PRMT7Q9NVM4 692 aaPredicted RBP10.11□□□□□ -0.79
HMGN1-201ENST00000288344 KBTBD4Q9NVX7 518 aa10.11□□□□□ -0.79
HMGN1-201ENST00000288344 PCDHA7Q9UN72 937 aa10.11□□□□□ -0.79
HMGN1-201ENST00000288344 IPPQ9Y573 584 aa10.11□□□□□ -0.79
HMGN1-201ENST00000288344 MYH11P35749 1972 aa10.11□□□□□ -0.79
HMGN1-201ENST00000288344 CNTNAP2Q9UHC6 1331 aa10.11□□□□□ -0.79
HMGN1-201ENST00000288344 TRIOO75962 3097 aa10.11□□□□□ -0.79
HMGN1-201ENST00000288344 TRIP11Q15643 1979 aa10.11□□□□□ -0.79
HMGN1-201ENST00000288344 MYMKA6NI61 221 aa10.1□□□□□ -0.79
HMGN1-201ENST00000288344 TBKBP1A7MCY6 615 aa10.1□□□□□ -0.79
HMGN1-201ENST00000288344 INO80B-WBP1J3KQ70 363 aa10.1□□□□□ -0.79
HMGN1-201ENST00000288344 SMAPO00193 183 aa10.1□□□□□ -0.79
HMGN1-201ENST00000288344 DDHD2O94830 711 aa10.1□□□□□ -0.79
HMGN1-201ENST00000288344 MAPTP10636 758 aaKnown RBP10.1□□□□□ -0.79
HMGN1-201ENST00000288344 SKIP12755 728 aa10.1□□□□□ -0.79
HMGN1-201ENST00000288344 PLS3P13797 630 aa10.1□□□□□ -0.79
HMGN1-201ENST00000288344 RAB27AP51159 221 aa10.1□□□□□ -0.79
HMGN1-201ENST00000288344 EFNA5P52803 228 aa10.1□□□□□ -0.79
HMGN1-201ENST00000288344 NCKAP1LP55160 1127 aa10.1□□□□□ -0.79
HMGN1-201ENST00000288344 PEX3P56589 373 aa10.1□□□□□ -0.79
HMGN1-201ENST00000288344 DSC1Q08554 894 aa10.1□□□□□ -0.79
HMGN1-201ENST00000288344 PPP2R5AQ15172 486 aa10.1□□□□□ -0.79
HMGN1-201ENST00000288344 CTC1Q2NKJ3 1217 aa10.1□□□□□ -0.79
HMGN1-201ENST00000288344 TWF2Q6IBS0 349 aaKnown RBP10.1□□□□□ -0.79
HMGN1-201ENST00000288344 NOTUMQ6P988 496 aa10.1□□□□□ -0.79
HMGN1-201ENST00000288344 CDR2LQ86X02 465 aaPredicted RBP10.1□□□□□ -0.79
HMGN1-201ENST00000288344 ZNF280BQ86YH2 543 aa10.1□□□□□ -0.79
HMGN1-201ENST00000288344 KLHL23Q8NBE8 558 aa10.1□□□□□ -0.79
HMGN1-201ENST00000288344 MAFAQ8NHW3 353 aaPredicted RBP10.1□□□□□ -0.79
HMGN1-201ENST00000288344 GDPD5Q8WTR4 605 aa10.1□□□□□ -0.79
HMGN1-201ENST00000288344 ZNF396Q96N95 335 aaPredicted RBP10.1□□□□□ -0.79
HMGN1-201ENST00000288344 ACO2Q99798 780 aaKnown RBP10.1□□□□□ -0.79
HMGN1-201ENST00000288344 C2orf40Q9H1Z8 148 aa10.1□□□□□ -0.79
HMGN1-201ENST00000288344 ST6GALNAC4Q9H4F1 302 aa10.1□□□□□ -0.79
HMGN1-201ENST00000288344 NRDE2Q9H7Z3 1164 aa10.1□□□□□ -0.79
HMGN1-201ENST00000288344 PRDM6Q9NQX0 595 aa10.1□□□□□ -0.79
HMGN1-201ENST00000288344 TBC1D13Q9NVG8 400 aa10.1□□□□□ -0.79
HMGN1-201ENST00000288344 STK17AQ9UEE5 414 aa10.1□□□□□ -0.79
HMGN1-201ENST00000288344 ODF2LQ9ULJ1 636 aa10.1□□□□□ -0.79
HMGN1-201ENST00000288344 TNFSF13BQ9Y275 285 aa10.1□□□□□ -0.79
HMGN1-201ENST00000288344 RWDD3Q9Y3V2 267 aa10.1□□□□□ -0.79
HMGN1-201ENST00000288344 RBM19Q9Y4C8 960 aaKnown RBP10.1□□□□□ -0.79
HMGN1-201ENST00000288344 HES2Q9Y543 173 aa10.1□□□□□ -0.79
HMGN1-201ENST00000288344 CUL9Q8IWT3 2517 aa10.1□□□□□ -0.79
HMGN1-201ENST00000288344 BDP1A6H8Y1 2624 aa10.1□□□□□ -0.79
HMGN1-201ENST00000288344 LRRIQ4A6NIV6 560 aa10.09□□□□□ -0.79
HMGN1-201ENST00000288344 FSCN2O14926 492 aa10.09□□□□□ -0.79
HMGN1-201ENST00000288344 HOXA2O43364 376 aa10.09□□□□□ -0.79
HMGN1-201ENST00000288344 FAM189A1O60320 539 aa10.09□□□□□ -0.79
HMGN1-201ENST00000288344 CUTAO60888 179 aa10.09□□□□□ -0.79
HMGN1-201ENST00000288344 PIGRP01833 764 aa10.09□□□□□ -0.79
HMGN1-201ENST00000288344 GALTP07902 379 aa10.09□□□□□ -0.79
HMGN1-201ENST00000288344 GTF2BQ00403 316 aa10.09□□□□□ -0.79
HMGN1-201ENST00000288344 EHHADHQ08426 723 aa10.09□□□□□ -0.79
HMGN1-201ENST00000288344 GPM6BQ13491 265 aa10.09□□□□□ -0.79
HMGN1-201ENST00000288344 KCNC3Q14003 757 aa10.09□□□□□ -0.79
HMGN1-201ENST00000288344 MAPK6Q16659 721 aa10.09□□□□□ -0.79
HMGN1-201ENST00000288344 PAN2Q504Q3 1202 aaKnown RBP10.09□□□□□ -0.79
HMGN1-201ENST00000288344 FOXD4L5Q5VV16 416 aaPredicted RBP10.09□□□□□ -0.79
HMGN1-201ENST00000288344 RESP18Q5W5W9 173 aa10.09□□□□□ -0.79
HMGN1-201ENST00000288344 SLC27A1Q6PCB7 646 aa10.09□□□□□ -0.79
HMGN1-201ENST00000288344 KCNT2Q6UVM3 1135 aa10.09□□□□□ -0.79
HMGN1-201ENST00000288344 PACS2Q86VP3 889 aa10.09□□□□□ -0.79
HMGN1-201ENST00000288344 TMEM173Q86WV6 379 aaPredicted RBP10.09□□□□□ -0.79
HMGN1-201ENST00000288344 RNF168Q8IYW5 571 aaPredicted RBP10.09□□□□□ -0.79
HMGN1-201ENST00000288344 SLC39A11Q8N1S5 342 aa10.09□□□□□ -0.79
HMGN1-201ENST00000288344 COLGALT1Q8NBJ5 622 aa10.09□□□□□ -0.79
HMGN1-201ENST00000288344 CNNM3Q8NE01 707 aa10.09□□□□□ -0.79
HMGN1-201ENST00000288344 HELQQ8TDG4 1101 aa10.09□□□□□ -0.79
HMGN1-201ENST00000288344 BCL7CQ8WUZ0 217 aaPredicted RBP10.09□□□□□ -0.79
HMGN1-201ENST00000288344 FOXD4L4Q8WXT5 416 aaPredicted RBP10.09□□□□□ -0.79
HMGN1-201ENST00000288344 LARP4BQ92615 738 aaKnown RBP10.09□□□□□ -0.79
HMGN1-201ENST00000288344 CALML4Q96GE6 196 aa10.09□□□□□ -0.79
HMGN1-201ENST00000288344 DRC1Q96MC2 740 aa10.09□□□□□ -0.79
HMGN1-201ENST00000288344 SCLT1Q96NL6 688 aa10.09□□□□□ -0.79
HMGN1-201ENST00000288344 GAS2L1Q99501 681 aaPredicted RBP10.09□□□□□ -0.79
HMGN1-201ENST00000288344 VN1R3Q9BXE9 311 aa10.09□□□□□ -0.79
HMGN1-201ENST00000288344 LMAN2LQ9H0V9 348 aa10.09□□□□□ -0.79
HMGN1-201ENST00000288344 LIMD1Q9UGP4 676 aa10.09□□□□□ -0.79
HMGN1-201ENST00000288344 MTUS1Q9ULD2 1270 aa10.09□□□□□ -0.79
HMGN1-201ENST00000288344 LRFN2Q9ULH4 789 aa10.09□□□□□ -0.79
HMGN1-201ENST00000288344 HPSEQ9Y251 543 aa10.09□□□□□ -0.79
HMGN1-201ENST00000288344 ZMYM2Q9UBW7 1377 aa10.09□□□□□ -0.79
HMGN1-201ENST00000288344 ARL5CA6NH57 179 aa10.08□□□□□ -0.8
HMGN1-201ENST00000288344 K7ERI5 159 aa10.08□□□□□ -0.8
HMGN1-201ENST00000288344 PTGESO14684 152 aa10.08□□□□□ -0.8
HMGN1-201ENST00000288344 SLC16A4O15374 487 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms