RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 PPP4R4Q6NUP7 873 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 FAM173BQ6P4H8 233 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 SPATA2LQ8IUW3 424 aaPredicted RBP4.3□□□□□ -1.72
SCN3A-201ENST00000283254 LCORLQ8N3X6 602 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 ANKRD13CQ8N6S4 541 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 PPARGC1AQ9UBK2 798 aaKnown RBP4.3□□□□□ -1.72
SCN3A-201ENST00000283254 HACL1Q9UJ83 578 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 ADGBQ8N7X0 1667 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 C16orf96A6NNT2 1141 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 DCDC2CA8MYV0 355 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 TPI1P60174 286 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 RUNX1T1Q06455 604 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 CDO1Q16878 200 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 DCAF4L1Q3SXM0 396 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 CEP170Q5SW79 1584 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 NAA35Q5VZE5 725 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 VSTM4Q8IW00 320 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 SKA1Q96BD8 255 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 PPP1R13BQ96KQ4 1090 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 RBBP8Q99708 897 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 SMARCAD1Q9H4L7 1026 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 NDFIP2Q9NV92 336 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 ZMYM2Q9UBW7 1377 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 CNOT8Q9UFF9 292 aaKnown RBP4.3□□□□□ -1.72
SCN3A-201ENST00000283254 ZNRF3Q9ULT6 936 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 PRR23D1E9PI22 279 aaPredicted RBP4.3□□□□□ -1.72
SCN3A-201ENST00000283254 MAP3K13O43283 966 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 TRPA1O75762 1119 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 PRR23D2P0DMB1 279 aaPredicted RBP4.3□□□□□ -1.72
SCN3A-201ENST00000283254 IMPDH2P12268 514 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 IL10P22301 178 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 HOXA13P31271 388 aaPredicted RBP4.3□□□□□ -1.72
SCN3A-201ENST00000283254 SLC16A2P36021 539 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 SLC1A1P43005 524 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 CRKP46108 304 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 LRRC24Q50LG9 513 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 SNX30Q5VWJ9 437 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 ZNF467Q7Z7K2 595 aaPredicted RBP4.3□□□□□ -1.72
SCN3A-201ENST00000283254 PRRG3Q9BZD7 231 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 WWP1Q9H0M0 922 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 SYNDIG1Q9H7V2 258 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 WDR41Q9HAD4 459 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 C6orf203Q9P0P8 240 aaPredicted RBP4.3□□□□□ -1.72
SCN3A-201ENST00000283254 CAPN11Q9UMQ6 739 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 FIS1Q9Y3D6 152 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 MROH7-TTC4A0A0A0MT08 1334 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 HEATR9A2RTY3 570 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 A8MXQ7 604 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 ORC4O43929 436 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 CCDC22O60826 627 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 MAPK1P28482 360 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 RANBP1P43487 201 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 KCNA1Q09470 495 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 FAM83BQ5T0W9 1011 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 FAM102AQ5T9C2 384 aaPredicted RBP4.3□□□□□ -1.72
SCN3A-201ENST00000283254 PKN3Q6P5Z2 889 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 DDX53Q86TM3 631 aaKnown RBP4.3□□□□□ -1.72
SCN3A-201ENST00000283254 SLC7A14Q8TBB6 771 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 SLC20A1Q8WUM9 679 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 OLFM3Q96PB7 478 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 C11orf70Q9BRQ4 267 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 EPB41L5Q9HCM4 733 aa4.3□□□□□ -1.72
SCN3A-201ENST00000283254 RASA4BC9J798 803 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 H0Y626 953 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 RASA4O43374 803 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 TRIM16O95361 564 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 EGFRP00533 1210 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 RGS2P41220 211 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 ACADSBP45954 432 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 NDUFA8P51970 172 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 SNRPFP62306 86 aaKnown RBP4.29□□□□□ -1.72
SCN3A-201ENST00000283254 ADCY1Q08828 1119 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 TP53BP2Q13625 1128 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 EFTUD2Q15029 972 aaKnown RBP eCLIP4.29□□□□□ -1.72
SCN3A-201ENST00000283254 GPIHBP1Q8IV16 184 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 GPD1LQ8N335 351 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 ENAHQ8N8S7 591 aaPredicted RBP4.29□□□□□ -1.72
SCN3A-201ENST00000283254 ZNF526Q8TF50 670 aaPredicted RBP4.29□□□□□ -1.72
SCN3A-201ENST00000283254 CDK5RAP1Q96SZ6 601 aaKnown RBP4.29□□□□□ -1.72
SCN3A-201ENST00000283254 LXNQ9BS40 222 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 TSEN34Q9BSV6 310 aaKnown RBP4.29□□□□□ -1.72
SCN3A-201ENST00000283254 GDAQ9Y2T3 454 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 JCADQ9P266 1359 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 FAM47E-STBD1D6RA91 191 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 APOL1O14791 398 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 GAS2O43903 313 aaKnown RBP4.29□□□□□ -1.72
SCN3A-201ENST00000283254 NDUFA10O95299 355 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 BMP10O95393 424 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 ACSL3O95573 720 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 MMEP08473 750 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 C6orf222P0C671 652 aaPredicted RBP4.29□□□□□ -1.72
SCN3A-201ENST00000283254 GARTP22102 1010 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 NPEPPSP55786 919 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 GPC5P78333 572 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 AP1B1Q10567 949 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 FASTKD1Q53R41 847 aaKnown RBP4.29□□□□□ -1.72
SCN3A-201ENST00000283254 ZNF557Q8N988 423 aaPredicted RBP4.29□□□□□ -1.72
SCN3A-201ENST00000283254 ACRBPQ8NEB7 543 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 IL17REQ8NFR9 667 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 PIP4K2CQ8TBX8 421 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms