RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 PPP1R14AQ96A00 147 aa3.2□□□□□ -1.9
HERC4-201ENST00000277817 NSUN4Q96CB9 384 aaKnown RBP3.2□□□□□ -1.9
HERC4-201ENST00000277817 HIC2Q96JB3 615 aa3.2□□□□□ -1.9
HERC4-201ENST00000277817 TSGA13Q96PP4 275 aa3.2□□□□□ -1.9
HERC4-201ENST00000277817 CENPHQ9H3R5 247 aa3.2□□□□□ -1.9
HERC4-201ENST00000277817 CNTD2Q9H8S5 307 aa3.2□□□□□ -1.9
HERC4-201ENST00000277817 REV1Q9UBZ9 1251 aa3.2□□□□□ -1.9
HERC4-201ENST00000277817 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.2□□□□□ -1.9
HERC4-201ENST00000277817 SCOCQ9UIL1 159 aa3.2□□□□□ -1.9
HERC4-201ENST00000277817 TMPRSS11EQ9UL52 423 aa3.2□□□□□ -1.9
HERC4-201ENST00000277817 SLC4A4Q9Y6R1 1079 aa3.2□□□□□ -1.9
HERC4-201ENST00000277817 V9GYY5 206 aaPredicted RBP3.2□□□□□ -1.9
HERC4-201ENST00000277817 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.2□□□□□ -1.9
HERC4-201ENST00000277817 KIF5CO60282 957 aa3.2□□□□□ -1.9
HERC4-201ENST00000277817 ERLIN1O75477 346 aa3.2□□□□□ -1.9
HERC4-201ENST00000277817 NR2F1P10589 423 aa3.2□□□□□ -1.9
HERC4-201ENST00000277817 CYP7A1P22680 504 aa3.2□□□□□ -1.9
HERC4-201ENST00000277817 HSPA4P34932 840 aa3.2□□□□□ -1.9
HERC4-201ENST00000277817 GNG11P61952 73 aa3.2□□□□□ -1.9
HERC4-201ENST00000277817 TNFAIP2Q03169 654 aa3.2□□□□□ -1.9
HERC4-201ENST00000277817 ODF2Q5BJF6 829 aa3.2□□□□□ -1.9
HERC4-201ENST00000277817 OTUD7BQ6GQQ9 843 aa3.2□□□□□ -1.9
HERC4-201ENST00000277817 LEKR1Q6ZMV7 388 aa3.2□□□□□ -1.9
HERC4-201ENST00000277817 RFX8Q6ZV50 586 aa3.2□□□□□ -1.9
HERC4-201ENST00000277817 ARMCX6Q7L4S7 300 aa3.2□□□□□ -1.9
HERC4-201ENST00000277817 ANKRD13BQ86YJ7 626 aa3.2□□□□□ -1.9
HERC4-201ENST00000277817 SIRT2Q8IXJ6 389 aa3.2□□□□□ -1.9
HERC4-201ENST00000277817 CYP2W1Q8TAV3 490 aa3.2□□□□□ -1.9
HERC4-201ENST00000277817 KCNG4Q8TDN1 519 aa3.2□□□□□ -1.9
HERC4-201ENST00000277817 ZBTB9Q96C00 473 aa3.2□□□□□ -1.9
HERC4-201ENST00000277817 CHFRQ96EP1 664 aa3.2□□□□□ -1.9
HERC4-201ENST00000277817 ZMAT2Q96NC0 199 aaKnown RBP3.2□□□□□ -1.9
HERC4-201ENST00000277817 EIF2AK1Q9BQI3 630 aaKnown RBP3.2□□□□□ -1.9
HERC4-201ENST00000277817 NKX2-4Q9H2Z4 354 aa3.2□□□□□ -1.9
HERC4-201ENST00000277817 SEC63Q9UGP8 760 aaKnown RBP3.2□□□□□ -1.9
HERC4-201ENST00000277817 HDAC9Q9UKV0 1011 aa3.2□□□□□ -1.9
HERC4-201ENST00000277817 STX8Q9UNK0 236 aa3.2□□□□□ -1.9
HERC4-201ENST00000277817 KCNH4Q9UQ05 1017 aa3.2□□□□□ -1.9
HERC4-201ENST00000277817 TLL2Q9Y6L7 1015 aa3.2□□□□□ -1.9
HERC4-201ENST00000277817 A0A088AWK7 358 aa3.2□□□□□ -1.9
HERC4-201ENST00000277817 A0A1B0GUL7 405 aa3.2□□□□□ -1.9
HERC4-201ENST00000277817 ZNF862O60290 1169 aa3.2□□□□□ -1.9
HERC4-201ENST00000277817 CFBP00751 764 aa3.2□□□□□ -1.9
HERC4-201ENST00000277817 PYGLP06737 847 aa3.2□□□□□ -1.9
HERC4-201ENST00000277817 UQCRFS1P1P0C7P4 283 aa3.2□□□□□ -1.9
HERC4-201ENST00000277817 CD86P42081 329 aa3.2□□□□□ -1.9
HERC4-201ENST00000277817 LIFRP42702 1097 aa3.2□□□□□ -1.9
HERC4-201ENST00000277817 DNA2P51530 1060 aa3.2□□□□□ -1.9
HERC4-201ENST00000277817 PTH1RQ03431 593 aa3.2□□□□□ -1.9
HERC4-201ENST00000277817 ADCY1Q08828 1119 aa3.2□□□□□ -1.9
HERC4-201ENST00000277817 BIRC3Q13489 604 aa3.2□□□□□ -1.9
HERC4-201ENST00000277817 PRICKLE4Q2TBC4 344 aa3.2□□□□□ -1.9
HERC4-201ENST00000277817 LIN54Q6MZP7 749 aa3.2□□□□□ -1.9
HERC4-201ENST00000277817 LLGL2Q6P1M3 1020 aa3.2□□□□□ -1.9
HERC4-201ENST00000277817 APOA5Q6Q788 366 aa3.2□□□□□ -1.9
HERC4-201ENST00000277817 HAUS7Q99871 368 aa3.2□□□□□ -1.9
HERC4-201ENST00000277817 ZFYVE21Q9BQ24 234 aa3.2□□□□□ -1.9
HERC4-201ENST00000277817 METTL22Q9BUU2 404 aaPredicted RBP3.2□□□□□ -1.9
HERC4-201ENST00000277817 STK33Q9BYT3 514 aa3.2□□□□□ -1.9
HERC4-201ENST00000277817 TWSG1Q9GZX9 223 aa3.2□□□□□ -1.9
HERC4-201ENST00000277817 ITM2CQ9NQX7 267 aa3.2□□□□□ -1.9
HERC4-201ENST00000277817 KRT82Q9NSB4 513 aa3.2□□□□□ -1.9
HERC4-201ENST00000277817 CWC15Q9P013 229 aaKnown RBP3.2□□□□□ -1.9
HERC4-201ENST00000277817 DNAI1Q9UI46 699 aa3.2□□□□□ -1.9
HERC4-201ENST00000277817 FPGT-TNNI3KV9GXZ4 949 aa3.2□□□□□ -1.9
HERC4-201ENST00000277817 PNPLA7Q6ZV29 1317 aa3.2□□□□□ -1.9
HERC4-201ENST00000277817 A0A1W2PPC4 97 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 B4E1Z4 1266 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 H0YHG0 523 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 PYGMP11217 842 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 IDEP14735 1019 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 IL2RBP14784 551 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 CTSOP43234 321 aaPredicted RBP3.19□□□□□ -1.9
HERC4-201ENST00000277817 PLA2G4AP47712 749 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 CACNB2Q08289 660 aaPredicted RBP3.19□□□□□ -1.9
HERC4-201ENST00000277817 ZNF543Q08ER8 600 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 SCARB2Q14108 478 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 GCKRQ14397 625 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 HS1BP3Q53T59 392 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 LMNTD2Q8IXW0 634 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 ZNF397Q8NF99 534 aaPredicted RBP3.19□□□□□ -1.9
HERC4-201ENST00000277817 CHTF18Q8WVB6 975 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 ZNF516Q92618 1163 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 EAF2Q96CJ1 260 aaPredicted RBP3.19□□□□□ -1.9
HERC4-201ENST00000277817 CCDC138Q96M89 665 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 ZNF287Q9HBT7 754 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 SEPT11Q9NVA2 429 aaKnown RBP3.19□□□□□ -1.9
HERC4-201ENST00000277817 PCOLCE2Q9UKZ9 415 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 NIP7Q9Y221 180 aaKnown RBP eCLIP3.19□□□□□ -1.9
HERC4-201ENST00000277817 PAXBP1Q9Y5B6 917 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 RAD50Q92878 1312 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 N4BP3O15049 544 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 TNRC18O15417 2968 aaPredicted RBP3.19□□□□□ -1.9
HERC4-201ENST00000277817 JAK2O60674 1132 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 GFPT2O94808 682 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 EPHX1P07099 455 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 CHKAP35790 457 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 CDR1P51861 262 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 ZNF445P59923 1031 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 PDE4BQ07343 736 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms