RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 PTENP60484 403 aa13.94□□□□□ -0.18
C9orf3-201ENST00000277198 CEP55Q53EZ4 464 aa13.94□□□□□ -0.18
C9orf3-201ENST00000277198 SAMD1Q6SPF0 538 aaPredicted RBP13.94□□□□□ -0.18
C9orf3-201ENST00000277198 B3GNT9Q6UX72 402 aa13.94□□□□□ -0.18
C9orf3-201ENST00000277198 PIGOQ8TEQ8 1089 aa13.94□□□□□ -0.18
C9orf3-201ENST00000277198 ARMC5Q96C12 935 aa13.94□□□□□ -0.18
C9orf3-201ENST00000277198 ZFP91Q96JP5 570 aaPredicted RBP13.94□□□□□ -0.18
C9orf3-201ENST00000277198 MRPL11Q9Y3B7 192 aaKnown RBP13.94□□□□□ -0.18
C9orf3-201ENST00000277198 FAM187AA6NFU0 413 aa13.94□□□□□ -0.18
C9orf3-201ENST00000277198 SPDYE16A6NNV3 312 aaPredicted RBP13.94□□□□□ -0.18
C9orf3-201ENST00000277198 MGAMO43451 1857 aa13.94□□□□□ -0.18
C9orf3-201ENST00000277198 BUB1BO60566 1050 aaPredicted RBP13.94□□□□□ -0.18
C9orf3-201ENST00000277198 GBP1P32455 592 aa13.94□□□□□ -0.18
C9orf3-201ENST00000277198 FLT3LGP49771 235 aa13.94□□□□□ -0.18
C9orf3-201ENST00000277198 SNAP25P60880 206 aa13.94□□□□□ -0.18
C9orf3-201ENST00000277198 SNRPFP62306 86 aaKnown RBP13.94□□□□□ -0.18
C9orf3-201ENST00000277198 CETN1Q12798 172 aa13.94□□□□□ -0.18
C9orf3-201ENST00000277198 PLS1Q14651 629 aa13.94□□□□□ -0.18
C9orf3-201ENST00000277198 UAP1Q16222 522 aaPredicted RBP13.94□□□□□ -0.18
C9orf3-201ENST00000277198 GJB7Q6PEY0 223 aa13.94□□□□□ -0.18
C9orf3-201ENST00000277198 GLYCTKQ8IVS8 523 aa13.94□□□□□ -0.18
C9orf3-201ENST00000277198 C12orf56Q8IXR9 622 aa13.94□□□□□ -0.18
C9orf3-201ENST00000277198 CHURC1Q8WUH1 139 aa13.94□□□□□ -0.18
C9orf3-201ENST00000277198 RIT2Q99578 217 aa13.94□□□□□ -0.18
C9orf3-201ENST00000277198 GPR88Q9GZN0 384 aa13.94□□□□□ -0.18
C9orf3-201ENST00000277198 INTS2Q9H0H0 1204 aaKnown RBP13.94□□□□□ -0.18
C9orf3-201ENST00000277198 GOLPH3Q9H4A6 298 aa13.94□□□□□ -0.18
C9orf3-201ENST00000277198 TMEM206Q9H813 350 aa13.94□□□□□ -0.18
C9orf3-201ENST00000277198 GOPCQ9HD26 462 aa13.94□□□□□ -0.18
C9orf3-201ENST00000277198 FBXO28Q9NVF7 368 aa13.94□□□□□ -0.18
C9orf3-201ENST00000277198 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.94□□□□□ -0.18
C9orf3-201ENST00000277198 BTBD7Q9P203 1132 aa13.94□□□□□ -0.18
C9orf3-201ENST00000277198 MORF4L1Q9UBU8 362 aa13.94□□□□□ -0.18
C9orf3-201ENST00000277198 AMACRQ9UHK6 382 aa13.94□□□□□ -0.18
C9orf3-201ENST00000277198 SFI1A8K8P3 1242 aa13.93□□□□□ -0.18
C9orf3-201ENST00000277198 MIF4GDA9UHW6 222 aaKnown RBP13.93□□□□□ -0.18
C9orf3-201ENST00000277198 MAPK13O15264 365 aa13.93□□□□□ -0.18
C9orf3-201ENST00000277198 PMM2O15305 246 aa13.93□□□□□ -0.18
C9orf3-201ENST00000277198 DDX3YO15523 660 aaKnown RBP13.93□□□□□ -0.18
C9orf3-201ENST00000277198 MEFVO15553 781 aaPredicted RBP13.93□□□□□ -0.18
C9orf3-201ENST00000277198 KIAA0754O94854 1291 aa13.93□□□□□ -0.18
C9orf3-201ENST00000277198 ELNP15502 786 aa13.93□□□□□ -0.18
C9orf3-201ENST00000277198 TNFAIP3P21580 790 aa13.93□□□□□ -0.18
C9orf3-201ENST00000277198 MYL7Q01449 175 aa13.93□□□□□ -0.18
C9orf3-201ENST00000277198 ZNF844Q08AG5 666 aa13.93□□□□□ -0.18
C9orf3-201ENST00000277198 BFSP1Q12934 665 aa13.93□□□□□ -0.18
C9orf3-201ENST00000277198 DHX34Q14147 1143 aaKnown RBP13.93□□□□□ -0.18
C9orf3-201ENST00000277198 ODR4Q5SWX8 454 aa13.93□□□□□ -0.18
C9orf3-201ENST00000277198 NAA35Q5VZE5 725 aa13.93□□□□□ -0.18
C9orf3-201ENST00000277198 INTS8Q75QN2 995 aaKnown RBP13.93□□□□□ -0.18
C9orf3-201ENST00000277198 TMC3Q7Z5M5 1100 aa13.93□□□□□ -0.18
C9orf3-201ENST00000277198 PACS2Q86VP3 889 aa13.93□□□□□ -0.18
C9orf3-201ENST00000277198 MORC4Q8TE76 937 aa13.93□□□□□ -0.18
C9orf3-201ENST00000277198 ZNF333Q96JL9 665 aa13.93□□□□□ -0.18
C9orf3-201ENST00000277198 RANBP17Q9H2T7 1088 aaKnown RBP13.93□□□□□ -0.18
C9orf3-201ENST00000277198 VCPKMTQ9H867 229 aa13.93□□□□□ -0.18
C9orf3-201ENST00000277198 PPFIA2O75334 1257 aa13.92□□□□□ -0.18
C9orf3-201ENST00000277198 FGGP02679 453 aa13.92□□□□□ -0.18
C9orf3-201ENST00000277198 PAEPP09466 180 aa13.92□□□□□ -0.18
C9orf3-201ENST00000277198 GUCY1A3Q02108 690 aa13.92□□□□□ -0.18
C9orf3-201ENST00000277198 MTFR1Q15390 333 aa13.92□□□□□ -0.18
C9orf3-201ENST00000277198 ZC2HC1CQ53FD0 456 aaPredicted RBP13.92□□□□□ -0.18
C9orf3-201ENST00000277198 TTC19Q6DKK2 380 aaPredicted RBP13.92□□□□□ -0.18
C9orf3-201ENST00000277198 NLRP14Q86W24 1093 aa13.92□□□□□ -0.18
C9orf3-201ENST00000277198 RAET1EQ8TD07 263 aa13.92□□□□□ -0.18
C9orf3-201ENST00000277198 TEKT3Q9BXF9 490 aa13.92□□□□□ -0.18
C9orf3-201ENST00000277198 USP20Q9Y2K6 914 aa13.92□□□□□ -0.18
C9orf3-201ENST00000277198 DAPK3O43293 454 aa13.92□□□□□ -0.18
C9orf3-201ENST00000277198 EXOC3O60645 756 aa13.92□□□□□ -0.18
C9orf3-201ENST00000277198 CFBP00751 764 aa13.92□□□□□ -0.18
C9orf3-201ENST00000277198 ITGA4P13612 1032 aa13.92□□□□□ -0.18
C9orf3-201ENST00000277198 KRT13P13646 458 aa13.92□□□□□ -0.18
C9orf3-201ENST00000277198 CDR1P51861 262 aa13.92□□□□□ -0.18
C9orf3-201ENST00000277198 MCCD1P59942 119 aaPredicted RBP13.92□□□□□ -0.18
C9orf3-201ENST00000277198 ARHGEF6Q15052 776 aa13.92□□□□□ -0.18
C9orf3-201ENST00000277198 CBWD6Q4V339 395 aa13.92□□□□□ -0.18
C9orf3-201ENST00000277198 CBWD3Q5JTY5 395 aa13.92□□□□□ -0.18
C9orf3-201ENST00000277198 CBWD5Q5RIA9 395 aa13.92□□□□□ -0.18
C9orf3-201ENST00000277198 C11orf63Q6NUN7 778 aa13.92□□□□□ -0.18
C9orf3-201ENST00000277198 CROCCP2Q86T23 111 aa13.92□□□□□ -0.18
C9orf3-201ENST00000277198 FAM160B2Q86V87 743 aa13.92□□□□□ -0.18
C9orf3-201ENST00000277198 MICALL1Q8N3F8 863 aa13.92□□□□□ -0.18
C9orf3-201ENST00000277198 GPRC5AQ8NFJ5 357 aa13.92□□□□□ -0.18
C9orf3-201ENST00000277198 MYCBPAPQ8TBZ2 947 aa13.92□□□□□ -0.18
C9orf3-201ENST00000277198 BBXQ8WY36 941 aaPredicted RBP13.92□□□□□ -0.18
C9orf3-201ENST00000277198 CCT8L2Q96SF2 557 aa13.92□□□□□ -0.18
C9orf3-201ENST00000277198 ZNF577Q9BSK1 485 aa13.92□□□□□ -0.18
C9orf3-201ENST00000277198 LARSQ9P2J5 1176 aaKnown RBP13.92□□□□□ -0.18
C9orf3-201ENST00000277198 SLC12A6Q9UHW9 1150 aa13.92□□□□□ -0.18
C9orf3-201ENST00000277198 SYNGAP1Q96PV0 1343 aa13.92□□□□□ -0.18
C9orf3-201ENST00000277198 RLFQ13129 1914 aa13.91□□□□□ -0.18
C9orf3-201ENST00000277198 TTI1O43156 1089 aa13.91□□□□□ -0.18
C9orf3-201ENST00000277198 GGPS1O95749 300 aa13.91□□□□□ -0.18
C9orf3-201ENST00000277198 DRP2Q13474 957 aa13.91□□□□□ -0.18
C9orf3-201ENST00000277198 SKIDA1Q1XH10 827 aa13.91□□□□□ -0.18
C9orf3-201ENST00000277198 SUGP1Q8IWZ8 645 aaKnown RBP13.91□□□□□ -0.18
C9orf3-201ENST00000277198 OTUD6BQ8N6M0 293 aa13.91□□□□□ -0.18
C9orf3-201ENST00000277198 LMO3Q8TAP4 145 aa13.91□□□□□ -0.18
C9orf3-201ENST00000277198 ZNF473Q8WTR7 871 aaKnown RBP13.91□□□□□ -0.18
C9orf3-201ENST00000277198 ATG4CQ96DT6 458 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms