RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 DUPD1Q68J44 220 aa16.82■□□□□ 0.28
CTDSP1-201ENST00000273062 SLF2Q8IX21 1173 aa16.82■□□□□ 0.28
CTDSP1-201ENST00000273062 FAM133AQ8N9E0 248 aa16.82■□□□□ 0.28
CTDSP1-201ENST00000273062 WDR60Q8WVS4 1066 aa16.82■□□□□ 0.28
CTDSP1-201ENST00000273062 ARHGEF2Q92974 986 aaKnown RBP16.82■□□□□ 0.28
CTDSP1-201ENST00000273062 WDR37Q9Y2I8 494 aa16.82■□□□□ 0.28
CTDSP1-201ENST00000273062 NUMBLQ9Y6R0 609 aa16.82■□□□□ 0.28
CTDSP1-201ENST00000273062 FAM205AQ6ZU69 1335 aa16.82■□□□□ 0.28
CTDSP1-201ENST00000273062 SPDYE16A6NNV3 312 aaPredicted RBP16.82■□□□□ 0.28
CTDSP1-201ENST00000273062 CCDC188H7C350 402 aa16.82■□□□□ 0.28
CTDSP1-201ENST00000273062 CES2O00748 559 aa16.82■□□□□ 0.28
CTDSP1-201ENST00000273062 E2F6O75461 281 aa16.82■□□□□ 0.28
CTDSP1-201ENST00000273062 NOL4O94818 638 aa16.82■□□□□ 0.28
CTDSP1-201ENST00000273062 FGGP02679 453 aa16.82■□□□□ 0.28
CTDSP1-201ENST00000273062 PYGMP11217 842 aa16.82■□□□□ 0.28
CTDSP1-201ENST00000273062 CDK7P50613 346 aa16.82■□□□□ 0.28
CTDSP1-201ENST00000273062 GTF2IP78347 998 aa16.82■□□□□ 0.28
CTDSP1-201ENST00000273062 MTFR1Q15390 333 aa16.82■□□□□ 0.28
CTDSP1-201ENST00000273062 PFKFB3Q16875 520 aaPredicted RBP16.82■□□□□ 0.28
CTDSP1-201ENST00000273062 STK32BQ9NY57 414 aa16.82■□□□□ 0.28
CTDSP1-201ENST00000273062 CLIC5Q9NZA1 410 aa16.82■□□□□ 0.28
CTDSP1-201ENST00000273062 MAD2L2Q9UI95 211 aa16.82■□□□□ 0.28
CTDSP1-201ENST00000273062 TMEM98Q9Y2Y6 226 aa16.82■□□□□ 0.28
CTDSP1-201ENST00000273062 NAV1Q8NEY1 1877 aa16.81■□□□□ 0.28
CTDSP1-201ENST00000273062 ROBO3Q96MS0 1386 aa16.81■□□□□ 0.28
CTDSP1-201ENST00000273062 FLT1P17948 1338 aa16.81■□□□□ 0.28
CTDSP1-201ENST00000273062 POLGP54098 1239 aaPredicted RBP16.81■□□□□ 0.28
CTDSP1-201ENST00000273062 RHBDL3P58872 404 aa16.81■□□□□ 0.28
CTDSP1-201ENST00000273062 PDE4DQ08499 809 aa16.81■□□□□ 0.28
CTDSP1-201ENST00000273062 SCUBE1Q8IWY4 988 aa16.81■□□□□ 0.28
CTDSP1-201ENST00000273062 ZNF184Q99676 751 aaPredicted RBP16.81■□□□□ 0.28
CTDSP1-201ENST00000273062 BRD8Q9H0E9 1235 aa16.81■□□□□ 0.28
CTDSP1-201ENST00000273062 KANSL2Q9H9L4 492 aa16.81■□□□□ 0.28
CTDSP1-201ENST00000273062 PPEF1O14829 653 aaPredicted RBP16.81■□□□□ 0.28
CTDSP1-201ENST00000273062 CYTH3O43739 400 aa16.81■□□□□ 0.28
CTDSP1-201ENST00000273062 BBOX1O75936 387 aa16.81■□□□□ 0.28
CTDSP1-201ENST00000273062 HOXA10P31260 410 aaPredicted RBP16.81■□□□□ 0.28
CTDSP1-201ENST00000273062 OXCT1P55809 520 aa16.81■□□□□ 0.28
CTDSP1-201ENST00000273062 EXOC3L4Q17RC7 722 aa16.81■□□□□ 0.28
CTDSP1-201ENST00000273062 TAOK1Q7L7X3 1001 aa16.81■□□□□ 0.28
CTDSP1-201ENST00000273062 HS2ST1Q7LGA3 356 aa16.81■□□□□ 0.28
CTDSP1-201ENST00000273062 INPP5DQ92835 1189 aa16.81■□□□□ 0.28
CTDSP1-201ENST00000273062 ASCC2Q9H1I8 757 aaPredicted RBP16.81■□□□□ 0.28
CTDSP1-201ENST00000273062 TBC1D30Q9Y2I9 924 aa16.81■□□□□ 0.28
CTDSP1-201ENST00000273062 SH3GLB1Q9Y371 365 aa16.81■□□□□ 0.28
CTDSP1-201ENST00000273062 PFASO15067 1338 aa16.8■□□□□ 0.28
CTDSP1-201ENST00000273062 SNED1Q8TER0 1413 aa16.8■□□□□ 0.28
CTDSP1-201ENST00000273062 TRIM43BA6NCK2 446 aa16.8■□□□□ 0.28
CTDSP1-201ENST00000273062 RNASEH1O60930 286 aaKnown RBP16.8■□□□□ 0.28
CTDSP1-201ENST00000273062 PHEXP78562 749 aa16.8■□□□□ 0.28
CTDSP1-201ENST00000273062 SH3D19Q5HYK7 790 aa16.8■□□□□ 0.28
CTDSP1-201ENST00000273062 SPDYCQ5MJ68 293 aa16.8■□□□□ 0.28
CTDSP1-201ENST00000273062 ZNF554Q86TJ5 538 aa16.8■□□□□ 0.28
CTDSP1-201ENST00000273062 ZNF444Q8N0Y2 327 aaPredicted RBP16.8■□□□□ 0.28
CTDSP1-201ENST00000273062 KIAA0895Q8NCT3 520 aa16.8■□□□□ 0.28
CTDSP1-201ENST00000273062 STKLD1Q8NE28 680 aa16.8■□□□□ 0.28
CTDSP1-201ENST00000273062 LRRC37BQ96QE4 947 aa16.8■□□□□ 0.28
CTDSP1-201ENST00000273062 PHF12Q96QT6 1004 aa16.8■□□□□ 0.28
CTDSP1-201ENST00000273062 TMEM47Q9BQJ4 181 aa16.8■□□□□ 0.28
CTDSP1-201ENST00000273062 ERP44Q9BS26 406 aa16.8■□□□□ 0.28
CTDSP1-201ENST00000273062 MYH4Q9Y623 1939 aa16.8■□□□□ 0.28
CTDSP1-201ENST00000273062 RIPK2O43353 540 aa16.8■□□□□ 0.28
CTDSP1-201ENST00000273062 SERPING1P05155 500 aa16.8■□□□□ 0.28
CTDSP1-201ENST00000273062 MARK3P27448 753 aa16.8■□□□□ 0.28
CTDSP1-201ENST00000273062 CDK8P49336 464 aa16.8■□□□□ 0.28
CTDSP1-201ENST00000273062 SLC34A1Q06495 639 aa16.8■□□□□ 0.28
CTDSP1-201ENST00000273062 PPP2R5CQ13362 524 aa16.8■□□□□ 0.28
CTDSP1-201ENST00000273062 PICALMQ13492 652 aa16.8■□□□□ 0.28
CTDSP1-201ENST00000273062 FAM83BQ5T0W9 1011 aa16.8■□□□□ 0.28
CTDSP1-201ENST00000273062 DAB2IPQ5VWQ8 1189 aa16.8■□□□□ 0.28
CTDSP1-201ENST00000273062 OLFML1Q6UWY5 402 aa16.8■□□□□ 0.28
CTDSP1-201ENST00000273062 MARK2Q7KZI7 788 aaKnown RBP16.8■□□□□ 0.28
CTDSP1-201ENST00000273062 SATL1Q86VE3 508 aa16.8■□□□□ 0.28
CTDSP1-201ENST00000273062 DGKHQ86XP1 1220 aa16.8■□□□□ 0.28
CTDSP1-201ENST00000273062 CENPKQ9BS16 269 aa16.8■□□□□ 0.28
CTDSP1-201ENST00000273062 NT5C3AQ9H0P0 336 aa16.8■□□□□ 0.28
CTDSP1-201ENST00000273062 UNC45AQ9H3U1 944 aa16.8■□□□□ 0.28
CTDSP1-201ENST00000273062 CIDEBQ9UHD4 219 aa16.8■□□□□ 0.28
CTDSP1-201ENST00000273062 ATP6V0A2Q9Y487 856 aa16.8■□□□□ 0.28
CTDSP1-201ENST00000273062 CDK5RAP2Q96SN8 1893 aa16.8■□□□□ 0.28
CTDSP1-201ENST00000273062 BMP15O95972 392 aa16.79■□□□□ 0.28
CTDSP1-201ENST00000273062 LDHCP07864 332 aa16.79■□□□□ 0.28
CTDSP1-201ENST00000273062 TAC1P20366 129 aa16.79■□□□□ 0.28
CTDSP1-201ENST00000273062 DR1Q01658 176 aa16.79■□□□□ 0.28
CTDSP1-201ENST00000273062 AP1B1Q10567 949 aa16.79■□□□□ 0.28
CTDSP1-201ENST00000273062 ACVR2BQ13705 512 aa16.79■□□□□ 0.28
CTDSP1-201ENST00000273062 DOK7Q18PE1 504 aa16.79■□□□□ 0.28
CTDSP1-201ENST00000273062 INF2Q27J81 1249 aa16.79■□□□□ 0.28
CTDSP1-201ENST00000273062 RFX8Q6ZV50 586 aa16.79■□□□□ 0.28
CTDSP1-201ENST00000273062 CADM1Q9BY67 442 aaKnown RBP16.79■□□□□ 0.28
CTDSP1-201ENST00000273062 SLCO1B3Q9NPD5 702 aa16.79■□□□□ 0.28
CTDSP1-201ENST00000273062 GRHL1Q9NZI5 618 aa16.79■□□□□ 0.28
CTDSP1-201ENST00000273062 DDX60LQ5H9U9 1706 aaKnown RBP16.79■□□□□ 0.28
CTDSP1-201ENST00000273062 PASKQ96RG2 1323 aa16.79■□□□□ 0.28
CTDSP1-201ENST00000273062 BICDL2A1A5D9 508 aa16.79■□□□□ 0.28
CTDSP1-201ENST00000273062 RAPGEF1Q13905 1077 aa16.79■□□□□ 0.28
CTDSP1-201ENST00000273062 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.79■□□□□ 0.28
CTDSP1-201ENST00000273062 RASGEF1CQ8N431 466 aa16.79■□□□□ 0.28
CTDSP1-201ENST00000273062 CERS5Q8N5B7 392 aa16.79■□□□□ 0.28
CTDSP1-201ENST00000273062 FBXO41Q8TF61 875 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms