RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 SLFN12LQ6IEE8 588 aa17.99■□□□□ 0.47
CCDC40-201ENST00000269318 NFRKBQ6P4R8 1299 aa17.99■□□□□ 0.47
CCDC40-201ENST00000269318 CRELD2Q6UXH1 353 aaPredicted RBP17.99■□□□□ 0.47
CCDC40-201ENST00000269318 FBXL13Q8NEE6 735 aa17.99■□□□□ 0.47
CCDC40-201ENST00000269318 HELQQ8TDG4 1101 aa17.99■□□□□ 0.47
CCDC40-201ENST00000269318 COG1Q8WTW3 980 aa17.99■□□□□ 0.47
CCDC40-201ENST00000269318 U2AF1L4Q8WU68 220 aaKnown RBP17.99■□□□□ 0.47
CCDC40-201ENST00000269318 CCDC94Q9BW85 323 aaPredicted RBP17.99■□□□□ 0.47
CCDC40-201ENST00000269318 TARS2Q9BW92 718 aaKnown RBP17.99■□□□□ 0.47
CCDC40-201ENST00000269318 ARGLU1Q9NWB6 273 aaPredicted RBP17.99■□□□□ 0.47
CCDC40-201ENST00000269318 AGO2Q9UKV8 859 aaKnown RBP17.99■□□□□ 0.47
CCDC40-201ENST00000269318 PLXNA1Q9UIW2 1896 aa17.99■□□□□ 0.47
CCDC40-201ENST00000269318 A0A0B4J269 797 aa17.99■□□□□ 0.47
CCDC40-201ENST00000269318 STRNO43815 780 aa17.99■□□□□ 0.47
CCDC40-201ENST00000269318 H2AFZP0C0S5 128 aa17.99■□□□□ 0.47
CCDC40-201ENST00000269318 DLATP10515 647 aaKnown RBP17.99■□□□□ 0.47
CCDC40-201ENST00000269318 TCP1P17987 556 aaKnown RBP17.99■□□□□ 0.47
CCDC40-201ENST00000269318 NLRP11P59045 1033 aaKnown RBP17.99■□□□□ 0.47
CCDC40-201ENST00000269318 CDCA2Q69YH5 1023 aaPredicted RBP17.99■□□□□ 0.47
CCDC40-201ENST00000269318 MAMDC4Q6UXC1 1216 aa17.99■□□□□ 0.47
CCDC40-201ENST00000269318 H2AFVQ71UI9 128 aa17.99■□□□□ 0.47
CCDC40-201ENST00000269318 ZNF572Q7Z3I7 529 aaPredicted RBP17.99■□□□□ 0.47
CCDC40-201ENST00000269318 ZNF467Q7Z7K2 595 aaPredicted RBP17.99■□□□□ 0.47
CCDC40-201ENST00000269318 FAM71AQ8IYT1 594 aa17.99■□□□□ 0.47
CCDC40-201ENST00000269318 ZNF516Q92618 1163 aa17.99■□□□□ 0.47
CCDC40-201ENST00000269318 ZBTB45Q96K62 511 aaPredicted RBP17.99■□□□□ 0.47
CCDC40-201ENST00000269318 RPGRIP1Q96KN7 1286 aa17.99■□□□□ 0.47
CCDC40-201ENST00000269318 KATNBL1Q9H079 304 aa17.99■□□□□ 0.47
CCDC40-201ENST00000269318 CCDC113Q9H0I3 377 aa17.99■□□□□ 0.47
CCDC40-201ENST00000269318 SMARCAD1Q9H4L7 1026 aa17.99■□□□□ 0.47
CCDC40-201ENST00000269318 RAB20Q9NX57 234 aa17.99■□□□□ 0.47
CCDC40-201ENST00000269318 TSKSQ9UJT2 592 aa17.99■□□□□ 0.47
CCDC40-201ENST00000269318 ADGRA2Q96PE1 1338 aa17.98■□□□□ 0.47
CCDC40-201ENST00000269318 A0A0A6YYK5 440 aaPredicted RBP17.98■□□□□ 0.47
CCDC40-201ENST00000269318 RBM47A0AV96 593 aaKnown RBP17.98■□□□□ 0.47
CCDC40-201ENST00000269318 CELF2O95319 508 aaKnown RBP17.98■□□□□ 0.47
CCDC40-201ENST00000269318 ZBTB48P10074 688 aaPredicted RBP17.98■□□□□ 0.47
CCDC40-201ENST00000269318 WNT7BP56706 349 aa17.98■□□□□ 0.47
CCDC40-201ENST00000269318 EXOC8Q8IYI6 725 aa17.98■□□□□ 0.47
CCDC40-201ENST00000269318 C2orf69Q8N8R5 385 aa17.98■□□□□ 0.47
CCDC40-201ENST00000269318 TCP11Q8WWU5 503 aa17.98■□□□□ 0.47
CCDC40-201ENST00000269318 SHC3Q92529 594 aa17.98■□□□□ 0.47
CCDC40-201ENST00000269318 PTPN18Q99952 460 aa17.98■□□□□ 0.47
CCDC40-201ENST00000269318 VTA1Q9NP79 307 aa17.98■□□□□ 0.47
CCDC40-201ENST00000269318 GALCP54803 685 aa17.97■□□□□ 0.47
CCDC40-201ENST00000269318 LAMTOR4Q0VGL1 99 aa17.97■□□□□ 0.47
CCDC40-201ENST00000269318 PRPF4BQ13523 1007 aaKnown RBP17.97■□□□□ 0.47
CCDC40-201ENST00000269318 MEI1Q5TIA1 1274 aa17.97■□□□□ 0.47
CCDC40-201ENST00000269318 PPM1KQ8N3J5 372 aa17.97■□□□□ 0.47
CCDC40-201ENST00000269318 AGPAT1Q99943 283 aa17.97■□□□□ 0.47
CCDC40-201ENST00000269318 RRAGCQ9HB90 399 aa17.97■□□□□ 0.47
CCDC40-201ENST00000269318 RAB21Q9UL25 225 aa17.97■□□□□ 0.47
CCDC40-201ENST00000269318 MSCO60682 206 aa17.97■□□□□ 0.47
CCDC40-201ENST00000269318 ZRANB2O95218 330 aaKnown RBP eCLIP17.97■□□□□ 0.47
CCDC40-201ENST00000269318 ACOT2P49753 483 aa17.97■□□□□ 0.47
CCDC40-201ENST00000269318 EFNA5P52803 228 aa17.97■□□□□ 0.47
CCDC40-201ENST00000269318 MFAP3P55082 362 aa17.97■□□□□ 0.47
CCDC40-201ENST00000269318 MXD4Q14582 209 aaPredicted RBP17.97■□□□□ 0.47
CCDC40-201ENST00000269318 ZPBP2Q6X784 338 aa17.97■□□□□ 0.47
CCDC40-201ENST00000269318 PALB2Q86YC2 1186 aa17.97■□□□□ 0.47
CCDC40-201ENST00000269318 LRRC71Q8N4P6 559 aa17.97■□□□□ 0.47
CCDC40-201ENST00000269318 LRRC57Q8N9N7 239 aa17.97■□□□□ 0.47
CCDC40-201ENST00000269318 SLC20A1Q8WUM9 679 aa17.97■□□□□ 0.47
CCDC40-201ENST00000269318 PNKPQ96T60 521 aa17.97■□□□□ 0.47
CCDC40-201ENST00000269318 SUGCTQ9HAC7 445 aa17.97■□□□□ 0.47
CCDC40-201ENST00000269318 TTLL13PA6NNM8 815 aa17.96■□□□□ 0.47
CCDC40-201ENST00000269318 HBP1O60381 514 aa17.96■□□□□ 0.47
CCDC40-201ENST00000269318 FTCDO95954 541 aa17.96■□□□□ 0.47
CCDC40-201ENST00000269318 TNFAIP3P21580 790 aa17.96■□□□□ 0.47
CCDC40-201ENST00000269318 LAMC2Q13753 1193 aa17.96■□□□□ 0.47
CCDC40-201ENST00000269318 ZBTB41Q5SVQ8 909 aa17.96■□□□□ 0.47
CCDC40-201ENST00000269318 GJC2Q5T442 439 aaPredicted RBP17.96■□□□□ 0.47
CCDC40-201ENST00000269318 GPR142Q7Z601 462 aa17.96■□□□□ 0.47
CCDC40-201ENST00000269318 NT5C1BQ96P26 610 aa17.96■□□□□ 0.47
CCDC40-201ENST00000269318 PARK7Q99497 189 aaKnown RBP17.96■□□□□ 0.47
CCDC40-201ENST00000269318 MSTO1Q9BUK6 570 aa17.96■□□□□ 0.47
CCDC40-201ENST00000269318 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.96■□□□□ 0.47
CCDC40-201ENST00000269318 ZC3H11AO75152 810 aaKnown RBP eCLIP17.95■□□□□ 0.46
CCDC40-201ENST00000269318 LDHAP00338 332 aaKnown RBP17.95■□□□□ 0.46
CCDC40-201ENST00000269318 C4BPAP04003 597 aaKnown RBP17.95■□□□□ 0.46
CCDC40-201ENST00000269318 TMEM253P0C7T8 217 aa17.95■□□□□ 0.46
CCDC40-201ENST00000269318 ITIH3Q06033 890 aa17.95■□□□□ 0.46
CCDC40-201ENST00000269318 GRB14Q14449 540 aa17.95■□□□□ 0.46
CCDC40-201ENST00000269318 IFI16Q16666 785 aaKnown RBP17.95■□□□□ 0.46
CCDC40-201ENST00000269318 ZACNQ401N2 412 aa17.95■□□□□ 0.46
CCDC40-201ENST00000269318 TPCN2Q8NHX9 752 aa17.95■□□□□ 0.46
CCDC40-201ENST00000269318 CAGE1Q8TC20 777 aa17.95■□□□□ 0.46
CCDC40-201ENST00000269318 TRAPPC12Q8WVT3 735 aa17.95■□□□□ 0.46
CCDC40-201ENST00000269318 EMID1Q96A84 441 aaPredicted RBP17.95■□□□□ 0.46
CCDC40-201ENST00000269318 FAM84AQ96KN4 292 aa17.95■□□□□ 0.46
CCDC40-201ENST00000269318 JPH2Q9BR39 696 aaPredicted RBP17.95■□□□□ 0.46
CCDC40-201ENST00000269318 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.95■□□□□ 0.46
CCDC40-201ENST00000269318 TAS2R14Q9NYV8 317 aa17.95■□□□□ 0.46
CCDC40-201ENST00000269318 RBAKQ9NYW8 714 aaPredicted RBP17.95■□□□□ 0.46
CCDC40-201ENST00000269318 ERAP1Q9NZ08 941 aa17.95■□□□□ 0.46
CCDC40-201ENST00000269318 ANKFY1Q9P2R3 1169 aa17.95■□□□□ 0.46
CCDC40-201ENST00000269318 NOCTQ9UK39 431 aaKnown RBP17.95■□□□□ 0.46
CCDC40-201ENST00000269318 TRPC6Q9Y210 931 aa17.95■□□□□ 0.46
CCDC40-201ENST00000269318 IVNS1ABPQ9Y6Y0 642 aa17.95■□□□□ 0.46
CCDC40-201ENST00000269318 NCANO14594 1321 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 336.2 ms