RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 RNPEPQ9H4A4 650 aa12.77□□□□□ -0.37
SRRM4-201ENST00000267260 BTG4Q9NY30 223 aa12.77□□□□□ -0.37
SRRM4-201ENST00000267260 MEFVO15553 781 aaPredicted RBP12.77□□□□□ -0.37
SRRM4-201ENST00000267260 URGCPQ8TCY9 931 aa12.77□□□□□ -0.37
SRRM4-201ENST00000267260 AIPL1Q9NZN9 384 aa12.77□□□□□ -0.37
SRRM4-201ENST00000267260 PEG3Q9GZU2 1588 aa12.77□□□□□ -0.37
SRRM4-201ENST00000267260 CD58P19256 250 aa12.77□□□□□ -0.37
SRRM4-201ENST00000267260 ZNF667Q5HYK9 610 aa12.77□□□□□ -0.37
SRRM4-201ENST00000267260 CC2D2BQ6DHV5 1058 aa12.77□□□□□ -0.37
SRRM4-201ENST00000267260 CC2D1AQ6P1N0 951 aaPredicted RBP12.77□□□□□ -0.37
SRRM4-201ENST00000267260 PKN3Q6P5Z2 889 aa12.77□□□□□ -0.37
SRRM4-201ENST00000267260 TMEM35BQ8NCS4 154 aa12.77□□□□□ -0.37
SRRM4-201ENST00000267260 TBCKQ8TEA7 893 aa12.77□□□□□ -0.37
SRRM4-201ENST00000267260 KCNK16Q96T55 309 aa12.77□□□□□ -0.37
SRRM4-201ENST00000267260 E7ENQ6 273 aa12.76□□□□□ -0.37
SRRM4-201ENST00000267260 DSG1Q02413 1049 aa12.76□□□□□ -0.37
SRRM4-201ENST00000267260 ORC2Q13416 577 aaPredicted RBP12.76□□□□□ -0.37
SRRM4-201ENST00000267260 SMYD4Q8IYR2 804 aaPredicted RBP12.76□□□□□ -0.37
SRRM4-201ENST00000267260 PSD3Q9NYI0 1048 aa12.76□□□□□ -0.37
SRRM4-201ENST00000267260 NDUFA13Q9P0J0 144 aa12.76□□□□□ -0.37
SRRM4-201ENST00000267260 HPS5Q9UPZ3 1129 aa12.76□□□□□ -0.37
SRRM4-201ENST00000267260 RFX8Q6ZV50 586 aa12.76□□□□□ -0.37
SRRM4-201ENST00000267260 G2E3Q7L622 706 aa12.76□□□□□ -0.37
SRRM4-201ENST00000267260 DIS3LQ8TF46 1054 aaKnown RBP12.76□□□□□ -0.37
SRRM4-201ENST00000267260 TOPORSQ9NS56 1045 aaPredicted RBP12.76□□□□□ -0.37
SRRM4-201ENST00000267260 STAP1Q9ULZ2 295 aa12.76□□□□□ -0.37
SRRM4-201ENST00000267260 CDC42BPBQ9Y5S2 1711 aa12.76□□□□□ -0.37
SRRM4-201ENST00000267260 SORBS3O60504 671 aa12.76□□□□□ -0.37
SRRM4-201ENST00000267260 ATXN8OSP0DMR3 200 aa12.76□□□□□ -0.37
SRRM4-201ENST00000267260 CRYMQ14894 314 aa12.76□□□□□ -0.37
SRRM4-201ENST00000267260 ADRM1Q16186 407 aa12.76□□□□□ -0.37
SRRM4-201ENST00000267260 FASTKD1Q53R41 847 aaKnown RBP12.76□□□□□ -0.37
SRRM4-201ENST00000267260 PDXDC2PQ6P474 469 aa12.76□□□□□ -0.37
SRRM4-201ENST00000267260 TMC4Q7Z404 712 aa12.76□□□□□ -0.37
SRRM4-201ENST00000267260 KRT77Q7Z794 578 aa12.76□□□□□ -0.37
SRRM4-201ENST00000267260 ADAM30Q9UKF2 790 aa12.76□□□□□ -0.37
SRRM4-201ENST00000267260 APPL1Q9UKG1 709 aa12.76□□□□□ -0.37
SRRM4-201ENST00000267260 POTEFA5A3E0 1075 aa12.76□□□□□ -0.37
SRRM4-201ENST00000267260 RNF103O00237 685 aa12.76□□□□□ -0.37
SRRM4-201ENST00000267260 BRAFP15056 766 aa12.76□□□□□ -0.37
SRRM4-201ENST00000267260 BTDP43251 543 aa12.76□□□□□ -0.37
SRRM4-201ENST00000267260 GYS2P54840 703 aa12.76□□□□□ -0.37
SRRM4-201ENST00000267260 SH3BP5LQ7L8J4 393 aa12.76□□□□□ -0.37
SRRM4-201ENST00000267260 MAML3Q96JK9 1138 aa12.76□□□□□ -0.37
SRRM4-201ENST00000267260 KANSL2Q9H9L4 492 aa12.76□□□□□ -0.37
SRRM4-201ENST00000267260 CLCA2Q9UQC9 943 aa12.76□□□□□ -0.37
SRRM4-201ENST00000267260 KRT6AP02538 564 aa12.76□□□□□ -0.37
SRRM4-201ENST00000267260 KRT6BP04259 564 aa12.76□□□□□ -0.37
SRRM4-201ENST00000267260 KRT6CP48668 564 aa12.76□□□□□ -0.37
SRRM4-201ENST00000267260 KCNQ4P56696 695 aa12.76□□□□□ -0.37
SRRM4-201ENST00000267260 SUPT20HL1Q3ZLR7 823 aa12.76□□□□□ -0.37
SRRM4-201ENST00000267260 SETD3Q86TU7 594 aaPredicted RBP12.76□□□□□ -0.37
SRRM4-201ENST00000267260 PNMA3Q9UL41 463 aa12.76□□□□□ -0.37
SRRM4-201ENST00000267260 CYTH3O43739 400 aa12.76□□□□□ -0.37
SRRM4-201ENST00000267260 DTNBO60941 627 aa12.76□□□□□ -0.37
SRRM4-201ENST00000267260 TSC22D2O75157 780 aa12.76□□□□□ -0.37
SRRM4-201ENST00000267260 TRIM25Q14258 630 aaKnown RBP12.76□□□□□ -0.37
SRRM4-201ENST00000267260 GPR141Q7Z602 305 aa12.76□□□□□ -0.37
SRRM4-201ENST00000267260 PCIF1Q9H4Z3 704 aa12.76□□□□□ -0.37
SRRM4-201ENST00000267260 VIPAS39Q9H9C1 493 aa12.76□□□□□ -0.37
SRRM4-201ENST00000267260 ABCC10Q5T3U5 1492 aa12.76□□□□□ -0.37
SRRM4-201ENST00000267260 ANKRD65E5RJM6 399 aa12.75□□□□□ -0.37
SRRM4-201ENST00000267260 INAQ16352 499 aa12.75□□□□□ -0.37
SRRM4-201ENST00000267260 CDKL3Q8IVW4 592 aaPredicted RBP12.75□□□□□ -0.37
SRRM4-201ENST00000267260 PDCD6IPQ8WUM4 868 aaKnown RBP12.75□□□□□ -0.37
SRRM4-201ENST00000267260 SH3KBP1Q96B97 665 aa12.75□□□□□ -0.37
SRRM4-201ENST00000267260 EEF2KMTQ96G04 330 aa12.75□□□□□ -0.37
SRRM4-201ENST00000267260 NUP85Q9BW27 656 aa12.75□□□□□ -0.37
SRRM4-201ENST00000267260 FHDC1Q9C0D6 1143 aaPredicted RBP12.75□□□□□ -0.37
SRRM4-201ENST00000267260 KLHL2O95198 593 aa12.75□□□□□ -0.37
SRRM4-201ENST00000267260 ENO1P06733 434 aaKnown RBP12.75□□□□□ -0.37
SRRM4-201ENST00000267260 HMOX2P30519 316 aa12.75□□□□□ -0.37
SRRM4-201ENST00000267260 PRKG1Q13976 671 aa12.75□□□□□ -0.37
SRRM4-201ENST00000267260 STAT4Q14765 748 aa12.75□□□□□ -0.37
SRRM4-201ENST00000267260 MICU2Q8IYU8 434 aa12.75□□□□□ -0.37
SRRM4-201ENST00000267260 LEMD3Q9Y2U8 911 aa12.75□□□□□ -0.37
SRRM4-201ENST00000267260 TRIM24O15164 1050 aa12.75□□□□□ -0.37
SRRM4-201ENST00000267260 RGS5O15539 181 aa12.75□□□□□ -0.37
SRRM4-201ENST00000267260 MTHFD1LQ6UB35 978 aa12.75□□□□□ -0.37
SRRM4-201ENST00000267260 LRRC39Q96DD0 335 aa12.75□□□□□ -0.37
SRRM4-201ENST00000267260 ALDH18A1P54886 795 aaKnown RBP12.75□□□□□ -0.37
SRRM4-201ENST00000267260 NCALDP61601 193 aa12.75□□□□□ -0.37
SRRM4-201ENST00000267260 PRKCQQ04759 706 aa12.75□□□□□ -0.37
SRRM4-201ENST00000267260 SPATA21Q7Z572 469 aa12.75□□□□□ -0.37
SRRM4-201ENST00000267260 C19orf18Q8NEA5 215 aa12.75□□□□□ -0.37
SRRM4-201ENST00000267260 SARS2Q9NP81 518 aaKnown RBP12.75□□□□□ -0.37
SRRM4-201ENST00000267260 LONP2Q86WA8 852 aa12.75□□□□□ -0.37
SRRM4-201ENST00000267260 MCPH1Q8NEM0 835 aa12.75□□□□□ -0.37
SRRM4-201ENST00000267260 APPL2Q8NEU8 664 aa12.75□□□□□ -0.37
SRRM4-201ENST00000267260 PARVAQ9NVD7 372 aa12.75□□□□□ -0.37
SRRM4-201ENST00000267260 RPAP1Q9BWH6 1393 aaPredicted RBP12.75□□□□□ -0.37
SRRM4-201ENST00000267260 SNTNA6NMZ2 147 aa12.75□□□□□ -0.37
SRRM4-201ENST00000267260 H7C0S8 307 aa12.75□□□□□ -0.37
SRRM4-201ENST00000267260 MAPRE1Q15691 268 aaKnown RBP12.75□□□□□ -0.37
SRRM4-201ENST00000267260 KLHL12Q53G59 568 aa12.75□□□□□ -0.37
SRRM4-201ENST00000267260 SPRTNQ9H040 489 aaPredicted RBP12.75□□□□□ -0.37
SRRM4-201ENST00000267260 DYRK4Q9NR20 520 aa12.75□□□□□ -0.37
SRRM4-201ENST00000267260 ABCC4O15439 1325 aa12.75□□□□□ -0.37
SRRM4-201ENST00000267260 SPDYE5A6NIY4 337 aa12.75□□□□□ -0.37
SRRM4-201ENST00000267260 PDZK1P1A8MUH7 402 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms