RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 LRRC37BQ96QE4 947 aa12.33□□□□□ -0.44
CLSTN3-201ENST00000266546 TGS1Q96RS0 853 aaKnown RBP12.33□□□□□ -0.44
CLSTN3-201ENST00000266546 STOML1Q9UBI4 398 aa12.33□□□□□ -0.44
CLSTN3-201ENST00000266546 K7ENM7 598 aa12.33□□□□□ -0.44
CLSTN3-201ENST00000266546 MYBL2P10244 700 aa12.33□□□□□ -0.44
CLSTN3-201ENST00000266546 HARSP12081 509 aaKnown RBP12.33□□□□□ -0.44
CLSTN3-201ENST00000266546 MUTP22033 750 aa12.33□□□□□ -0.44
CLSTN3-201ENST00000266546 MAPK4P31152 587 aa12.33□□□□□ -0.44
CLSTN3-201ENST00000266546 MSH2P43246 934 aa12.33□□□□□ -0.44
CLSTN3-201ENST00000266546 RAD23BP54727 409 aa12.33□□□□□ -0.44
CLSTN3-201ENST00000266546 DHX34Q14147 1143 aaKnown RBP12.33□□□□□ -0.44
CLSTN3-201ENST00000266546 TSEN2Q8NCE0 465 aaKnown RBP12.33□□□□□ -0.44
CLSTN3-201ENST00000266546 MAK16Q9BXY0 300 aaKnown RBP12.33□□□□□ -0.44
CLSTN3-201ENST00000266546 GOLPH3Q9H4A6 298 aa12.33□□□□□ -0.44
CLSTN3-201ENST00000266546 TMBIM4Q9HC24 238 aa12.33□□□□□ -0.44
CLSTN3-201ENST00000266546 USP15Q9Y4E8 981 aaPredicted RBP12.33□□□□□ -0.44
CLSTN3-201ENST00000266546 ZSCAN5CA6NGD5 496 aaPredicted RBP12.32□□□□□ -0.44
CLSTN3-201ENST00000266546 MAFGO15525 162 aa12.32□□□□□ -0.44
CLSTN3-201ENST00000266546 EIF2AK2P19525 551 aaKnown RBP12.32□□□□□ -0.44
CLSTN3-201ENST00000266546 ALCAMQ13740 583 aa12.32□□□□□ -0.44
CLSTN3-201ENST00000266546 Q4G0T1 1027 aa12.32□□□□□ -0.44
CLSTN3-201ENST00000266546 SH2D4BQ5SQS7 431 aa12.32□□□□□ -0.44
CLSTN3-201ENST00000266546 CREG2Q8IUH2 290 aa12.32□□□□□ -0.44
CLSTN3-201ENST00000266546 GLYCTKQ8IVS8 523 aa12.32□□□□□ -0.44
CLSTN3-201ENST00000266546 RIT2Q99578 217 aa12.32□□□□□ -0.44
CLSTN3-201ENST00000266546 OSBPL1AQ9BXW6 950 aa12.32□□□□□ -0.44
CLSTN3-201ENST00000266546 RANBP17Q9H2T7 1088 aaKnown RBP12.32□□□□□ -0.44
CLSTN3-201ENST00000266546 UBE2TQ9NPD8 197 aaPredicted RBP12.32□□□□□ -0.44
CLSTN3-201ENST00000266546 ARL2BPQ9Y2Y0 163 aa12.32□□□□□ -0.44
CLSTN3-201ENST00000266546 RASA4BC9J798 803 aa12.32□□□□□ -0.44
CLSTN3-201ENST00000266546 RASA4O43374 803 aa12.32□□□□□ -0.44
CLSTN3-201ENST00000266546 OAZ1P54368 228 aa12.32□□□□□ -0.44
CLSTN3-201ENST00000266546 RWDD2BP57060 319 aa12.32□□□□□ -0.44
CLSTN3-201ENST00000266546 MTMR1Q13613 665 aa12.32□□□□□ -0.44
CLSTN3-201ENST00000266546 KIAA1755Q5JYT7 1200 aa12.32□□□□□ -0.44
CLSTN3-201ENST00000266546 EP400NLQ6ZTU2 488 aa12.32□□□□□ -0.44
CLSTN3-201ENST00000266546 USP50Q70EL3 339 aaPredicted RBP12.32□□□□□ -0.44
CLSTN3-201ENST00000266546 SPATA21Q7Z572 469 aa12.32□□□□□ -0.44
CLSTN3-201ENST00000266546 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.32□□□□□ -0.44
CLSTN3-201ENST00000266546 RFFLQ8WZ73 363 aa12.32□□□□□ -0.44
CLSTN3-201ENST00000266546 CFAP57Q96MR6 1250 aa12.32□□□□□ -0.44
CLSTN3-201ENST00000266546 SFI1A8K8P3 1242 aa12.32□□□□□ -0.44
CLSTN3-201ENST00000266546 VEGFAP15692 232 aaPredicted RBP12.32□□□□□ -0.44
CLSTN3-201ENST00000266546 KCNA3P22001 575 aa12.32□□□□□ -0.44
CLSTN3-201ENST00000266546 SCP2P22307 547 aa12.32□□□□□ -0.44
CLSTN3-201ENST00000266546 AMPD2Q01433 879 aa12.32□□□□□ -0.44
CLSTN3-201ENST00000266546 LMNB2Q03252 620 aa12.32□□□□□ -0.44
CLSTN3-201ENST00000266546 SPARCL1Q14515 664 aa12.32□□□□□ -0.44
CLSTN3-201ENST00000266546 ARHGEF6Q15052 776 aa12.32□□□□□ -0.44
CLSTN3-201ENST00000266546 CELF4Q9BZC1 486 aaKnown RBP12.32□□□□□ -0.44
CLSTN3-201ENST00000266546 DNAJC18Q9H819 358 aa12.32□□□□□ -0.44
CLSTN3-201ENST00000266546 GPBP1L1Q9HC44 474 aaPredicted RBP12.32□□□□□ -0.44
CLSTN3-201ENST00000266546 RAB20Q9NX57 234 aa12.32□□□□□ -0.44
CLSTN3-201ENST00000266546 MYMKA6NI61 221 aa12.31□□□□□ -0.44
CLSTN3-201ENST00000266546 MAP3K7O43318 606 aa12.31□□□□□ -0.44
CLSTN3-201ENST00000266546 FGFR4P22455 802 aa12.31□□□□□ -0.44
CLSTN3-201ENST00000266546 CCND1P24385 295 aa12.31□□□□□ -0.44
CLSTN3-201ENST00000266546 HSPA9P38646 679 aaKnown RBP12.31□□□□□ -0.44
CLSTN3-201ENST00000266546 PPM1FP49593 454 aaPredicted RBP12.31□□□□□ -0.44
CLSTN3-201ENST00000266546 SATB1Q01826 763 aa12.31□□□□□ -0.44
CLSTN3-201ENST00000266546 KAZNQ674X7 775 aa12.31□□□□□ -0.44
CLSTN3-201ENST00000266546 CCDC137Q6PK04 289 aaKnown RBP12.31□□□□□ -0.44
CLSTN3-201ENST00000266546 ZC3H18Q86VM9 953 aaKnown RBP12.31□□□□□ -0.44
CLSTN3-201ENST00000266546 C2orf69Q8N8R5 385 aa12.31□□□□□ -0.44
CLSTN3-201ENST00000266546 CHST13Q8NET6 341 aa12.31□□□□□ -0.44
CLSTN3-201ENST00000266546 PITPNM2Q9BZ72 1349 aa12.31□□□□□ -0.44
CLSTN3-201ENST00000266546 NAV1Q8NEY1 1877 aa12.31□□□□□ -0.44
CLSTN3-201ENST00000266546 LAMA4Q16363 1823 aa12.31□□□□□ -0.44
CLSTN3-201ENST00000266546 PIK3CDO00329 1044 aa12.31□□□□□ -0.44
CLSTN3-201ENST00000266546 IPO5O00410 1097 aaKnown RBP12.31□□□□□ -0.44
CLSTN3-201ENST00000266546 NOP56O00567 594 aaKnown RBP12.31□□□□□ -0.44
CLSTN3-201ENST00000266546 LMNAP02545 664 aaKnown RBP12.31□□□□□ -0.44
CLSTN3-201ENST00000266546 PMS1P54277 932 aaKnown RBP12.31□□□□□ -0.44
CLSTN3-201ENST00000266546 CTTNQ14247 550 aaKnown RBP12.31□□□□□ -0.44
CLSTN3-201ENST00000266546 LRRC23Q53EV4 343 aaPredicted RBP12.31□□□□□ -0.44
CLSTN3-201ENST00000266546 PIGOQ8TEQ8 1089 aa12.31□□□□□ -0.44
CLSTN3-201ENST00000266546 NUDCD1Q96RS6 583 aa12.31□□□□□ -0.44
CLSTN3-201ENST00000266546 SEL1LQ9UBV2 794 aa12.31□□□□□ -0.44
CLSTN3-201ENST00000266546 A0A087X0T9 212 aa12.31□□□□□ -0.44
CLSTN3-201ENST00000266546 POTEFA5A3E0 1075 aa12.31□□□□□ -0.44
CLSTN3-201ENST00000266546 NR3C1P04150 777 aa12.31□□□□□ -0.44
CLSTN3-201ENST00000266546 FAM228BP0C875 321 aa12.31□□□□□ -0.44
CLSTN3-201ENST00000266546 POTEIP0CG38 1075 aa12.31□□□□□ -0.44
CLSTN3-201ENST00000266546 NSFP46459 744 aaKnown RBP12.31□□□□□ -0.44
CLSTN3-201ENST00000266546 NAALADL2Q58DX5 795 aa12.31□□□□□ -0.44
CLSTN3-201ENST00000266546 POTEGQ6S5H5 508 aa12.31□□□□□ -0.44
CLSTN3-201ENST00000266546 POTEEQ6S8J3 1075 aa12.31□□□□□ -0.44
CLSTN3-201ENST00000266546 APBB1IPQ7Z5R6 666 aaPredicted RBP12.31□□□□□ -0.44
CLSTN3-201ENST00000266546 ERO1BQ86YB8 467 aa12.31□□□□□ -0.44
CLSTN3-201ENST00000266546 KIRREL3Q8IZU9 778 aa12.31□□□□□ -0.44
CLSTN3-201ENST00000266546 WDR91A4D1P6 747 aa12.3□□□□□ -0.44
CLSTN3-201ENST00000266546 RASSF10A6NK89 507 aa12.3□□□□□ -0.44
CLSTN3-201ENST00000266546 WDR64B1ANS9 1081 aa12.3□□□□□ -0.44
CLSTN3-201ENST00000266546 KIF3CO14782 793 aa12.3□□□□□ -0.44
CLSTN3-201ENST00000266546 SORBS3O60504 671 aa12.3□□□□□ -0.44
CLSTN3-201ENST00000266546 STAM2O75886 525 aa12.3□□□□□ -0.44
CLSTN3-201ENST00000266546 P4HBP07237 508 aaKnown RBP12.3□□□□□ -0.44
CLSTN3-201ENST00000266546 FAM153BP0C7A2 387 aa12.3□□□□□ -0.44
CLSTN3-201ENST00000266546 IRX4P78413 519 aa12.3□□□□□ -0.44
CLSTN3-201ENST00000266546 BFSP1Q12934 665 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms