RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 MSTO1Q9BUK6 570 aa10.63□□□□□ -0.71
SNRNP40-201ENST00000263694 PDZD7Q9H5P4 517 aa10.63□□□□□ -0.71
SNRNP40-201ENST00000263694 C11orf49Q9H6J7 331 aa10.63□□□□□ -0.71
SNRNP40-201ENST00000263694 AGO3Q9H9G7 860 aaKnown RBP10.63□□□□□ -0.71
SNRNP40-201ENST00000263694 PTPRHQ9HD43 1115 aa10.63□□□□□ -0.71
SNRNP40-201ENST00000263694 INTS13Q9NVM9 706 aa10.63□□□□□ -0.71
SNRNP40-201ENST00000263694 MAGEC2Q9UBF1 373 aaPredicted RBP10.63□□□□□ -0.71
SNRNP40-201ENST00000263694 LIMA1Q9UHB6 759 aaKnown RBP10.63□□□□□ -0.71
SNRNP40-201ENST00000263694 AGO2Q9UKV8 859 aaKnown RBP10.63□□□□□ -0.71
SNRNP40-201ENST00000263694 ATP11BQ9Y2G3 1177 aa10.63□□□□□ -0.71
SNRNP40-201ENST00000263694 UMODL1Q5DID0 1318 aa10.63□□□□□ -0.71
SNRNP40-201ENST00000263694 CNTNAP2Q9UHC6 1331 aa10.63□□□□□ -0.71
SNRNP40-201ENST00000263694 A0A0B4J269 797 aa10.62□□□□□ -0.71
SNRNP40-201ENST00000263694 PES1O00541 588 aaKnown RBP10.62□□□□□ -0.71
SNRNP40-201ENST00000263694 CLDN3O15551 220 aa10.62□□□□□ -0.71
SNRNP40-201ENST00000263694 RPS6KA5O75582 802 aa10.62□□□□□ -0.71
SNRNP40-201ENST00000263694 TOM1L1O75674 476 aa10.62□□□□□ -0.71
SNRNP40-201ENST00000263694 GARTP22102 1010 aa10.62□□□□□ -0.71
SNRNP40-201ENST00000263694 SCP2P22307 547 aa10.62□□□□□ -0.71
SNRNP40-201ENST00000263694 PROZP22891 400 aa10.62□□□□□ -0.71
SNRNP40-201ENST00000263694 EEF1GP26641 437 aaKnown RBP10.62□□□□□ -0.71
SNRNP40-201ENST00000263694 ABCD1P33897 745 aa10.62□□□□□ -0.71
SNRNP40-201ENST00000263694 PSMC2P35998 433 aaKnown RBP10.62□□□□□ -0.71
SNRNP40-201ENST00000263694 WNT7BP56706 349 aa10.62□□□□□ -0.71
SNRNP40-201ENST00000263694 OSTNP61366 133 aa10.62□□□□□ -0.71
SNRNP40-201ENST00000263694 DLG4P78352 724 aa10.62□□□□□ -0.71
SNRNP40-201ENST00000263694 MBTPS1Q14703 1052 aa10.62□□□□□ -0.71
SNRNP40-201ENST00000263694 LRRC26Q2I0M4 334 aa10.62□□□□□ -0.71
SNRNP40-201ENST00000263694 MIIPQ5JXC2 388 aa10.62□□□□□ -0.71
SNRNP40-201ENST00000263694 TRAF7Q6Q0C0 670 aa10.62□□□□□ -0.71
SNRNP40-201ENST00000263694 SARM1Q6SZW1 724 aa10.62□□□□□ -0.71
SNRNP40-201ENST00000263694 CRELD2Q6UXH1 353 aaPredicted RBP10.62□□□□□ -0.71
SNRNP40-201ENST00000263694 FAM114A1Q8IWE2 563 aa10.62□□□□□ -0.71
SNRNP40-201ENST00000263694 TMEM192Q8IY95 271 aa10.62□□□□□ -0.71
SNRNP40-201ENST00000263694 THNSL1Q8IYQ7 743 aa10.62□□□□□ -0.71
SNRNP40-201ENST00000263694 CCDC155Q8N6L0 562 aa10.62□□□□□ -0.71
SNRNP40-201ENST00000263694 PLEKHO2Q8TD55 490 aa10.62□□□□□ -0.71
SNRNP40-201ENST00000263694 BORCS6Q96GS4 357 aa10.62□□□□□ -0.71
SNRNP40-201ENST00000263694 EIF2AQ9BY44 585 aaKnown RBP10.62□□□□□ -0.71
SNRNP40-201ENST00000263694 CDT1Q9H211 546 aa10.62□□□□□ -0.71
SNRNP40-201ENST00000263694 CGNQ9P2M7 1197 aaKnown RBP10.62□□□□□ -0.71
SNRNP40-201ENST00000263694 ST3GAL5Q9UNP4 418 aa10.62□□□□□ -0.71
SNRNP40-201ENST00000263694 TNFSF13BQ9Y275 285 aa10.62□□□□□ -0.71
SNRNP40-201ENST00000263694 FRMD4BQ9Y2L6 1034 aa10.62□□□□□ -0.71
SNRNP40-201ENST00000263694 SCN5AQ14524 2016 aa10.62□□□□□ -0.71
SNRNP40-201ENST00000263694 TRIP11Q15643 1979 aa10.61□□□□□ -0.71
SNRNP40-201ENST00000263694 A0A1B0GUA9 196 aa10.61□□□□□ -0.71
SNRNP40-201ENST00000263694 LRRC10BA6NIK2 292 aa10.61□□□□□ -0.71
SNRNP40-201ENST00000263694 N4BP3O15049 544 aa10.61□□□□□ -0.71
SNRNP40-201ENST00000263694 NPTXRO95502 500 aa10.61□□□□□ -0.71
SNRNP40-201ENST00000263694 TRIM49P0CI25 452 aa10.61□□□□□ -0.71
SNRNP40-201ENST00000263694 TRIM49CP0CI26 452 aa10.61□□□□□ -0.71
SNRNP40-201ENST00000263694 EPB41P11171 864 aaKnown RBP10.61□□□□□ -0.71
SNRNP40-201ENST00000263694 CD52P31358 61 aa10.61□□□□□ -0.71
SNRNP40-201ENST00000263694 SNRPFP62306 86 aaKnown RBP10.61□□□□□ -0.71
SNRNP40-201ENST00000263694 MCL1Q07820 350 aa10.61□□□□□ -0.71
SNRNP40-201ENST00000263694 FAAP100Q0VG06 881 aa10.61□□□□□ -0.71
SNRNP40-201ENST00000263694 NFX1Q12986 1120 aaKnown RBP10.61□□□□□ -0.71
SNRNP40-201ENST00000263694 LPIN1Q14693 890 aa10.61□□□□□ -0.71
SNRNP40-201ENST00000263694 SNRNP35Q16560 246 aaKnown RBP10.61□□□□□ -0.71
SNRNP40-201ENST00000263694 ZNF568Q3ZCX4 644 aa10.61□□□□□ -0.71
SNRNP40-201ENST00000263694 FBXO47Q5MNV8 452 aa10.61□□□□□ -0.71
SNRNP40-201ENST00000263694 IER5LQ5T953 404 aa10.61□□□□□ -0.71
SNRNP40-201ENST00000263694 SLFN12LQ6IEE8 588 aa10.61□□□□□ -0.71
SNRNP40-201ENST00000263694 MPZL3Q6UWV2 235 aa10.61□□□□□ -0.71
SNRNP40-201ENST00000263694 FRMD5Q7Z6J6 570 aa10.61□□□□□ -0.71
SNRNP40-201ENST00000263694 TRIM59Q8IWR1 403 aa10.61□□□□□ -0.71
SNRNP40-201ENST00000263694 GPD1LQ8N335 351 aa10.61□□□□□ -0.71
SNRNP40-201ENST00000263694 ANKLE1Q8NAG6 615 aa10.61□□□□□ -0.71
SNRNP40-201ENST00000263694 PRIMPOLQ96LW4 560 aa10.61□□□□□ -0.71
SNRNP40-201ENST00000263694 POP1Q99575 1024 aaKnown RBP10.61□□□□□ -0.71
SNRNP40-201ENST00000263694 NOC4LQ9BVI4 516 aaKnown RBP10.61□□□□□ -0.71
SNRNP40-201ENST00000263694 ARMCX3Q9UH62 379 aaPredicted RBP10.61□□□□□ -0.71
SNRNP40-201ENST00000263694 PIN4Q9Y237 131 aaKnown RBP10.61□□□□□ -0.71
SNRNP40-201ENST00000263694 TET1Q8NFU7 2136 aa10.61□□□□□ -0.71
SNRNP40-201ENST00000263694 A0A1B0GTH6 734 aa10.6□□□□□ -0.71
SNRNP40-201ENST00000263694 DCDC2CA8MYV0 355 aa10.6□□□□□ -0.71
SNRNP40-201ENST00000263694 SLC16A3O15427 465 aaKnown RBP10.6□□□□□ -0.71
SNRNP40-201ENST00000263694 EXTL3O43909 919 aa10.6□□□□□ -0.71
SNRNP40-201ENST00000263694 FAM189A1O60320 539 aa10.6□□□□□ -0.71
SNRNP40-201ENST00000263694 SFPQP23246 707 aaKnown RBP eCLIP10.6□□□□□ -0.71
SNRNP40-201ENST00000263694 SPAG1Q07617 926 aa10.6□□□□□ -0.71
SNRNP40-201ENST00000263694 MYBPC2Q14324 1141 aa10.6□□□□□ -0.71
SNRNP40-201ENST00000263694 NOLC1Q14978 699 aaKnown RBP eCLIP10.6□□□□□ -0.71
SNRNP40-201ENST00000263694 NR1I3Q14994 352 aa10.6□□□□□ -0.71
SNRNP40-201ENST00000263694 DCAF17Q5H9S7 520 aaPredicted RBP10.6□□□□□ -0.71
SNRNP40-201ENST00000263694 FAM26DQ5JW98 314 aa10.6□□□□□ -0.71
SNRNP40-201ENST00000263694 C1orf220Q5T0J3 134 aa10.6□□□□□ -0.71
SNRNP40-201ENST00000263694 TCERG1LQ5VWI1 586 aa10.6□□□□□ -0.71
SNRNP40-201ENST00000263694 LMBRD2Q68DH5 695 aaPredicted RBP10.6□□□□□ -0.71
SNRNP40-201ENST00000263694 ANKRD33Q7Z3H0 272 aa10.6□□□□□ -0.71
SNRNP40-201ENST00000263694 TMEM174Q8WUU8 243 aa10.6□□□□□ -0.71
SNRNP40-201ENST00000263694 CCDC127Q96BQ5 260 aa10.6□□□□□ -0.71
SNRNP40-201ENST00000263694 FBXL18Q96ME1 805 aa10.6□□□□□ -0.71
SNRNP40-201ENST00000263694 PPP1R12CQ9BZL4 782 aa10.6□□□□□ -0.71
SNRNP40-201ENST00000263694 MMRN2Q9H8L6 949 aa10.6□□□□□ -0.71
SNRNP40-201ENST00000263694 RTN4Q9NQC3 1192 aaKnown RBP10.6□□□□□ -0.71
SNRNP40-201ENST00000263694 TOPORSQ9NS56 1045 aaPredicted RBP10.6□□□□□ -0.71
SNRNP40-201ENST00000263694 AGPAT5Q9NUQ2 364 aa10.6□□□□□ -0.71
SNRNP40-201ENST00000263694 PADI3Q9ULW8 664 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms