RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 ACTRT1Q8TDG2 376 aa17.31■□□□□ 0.36
PDZRN3-201ENST00000263666 ZNF526Q8TF50 670 aaPredicted RBP17.31■□□□□ 0.36
PDZRN3-201ENST00000263666 RMDN3Q96TC7 470 aa17.31■□□□□ 0.36
PDZRN3-201ENST00000263666 TMEM206Q9H813 350 aa17.31■□□□□ 0.36
PDZRN3-201ENST00000263666 CTNNAL1Q9UBT7 734 aa17.31■□□□□ 0.36
PDZRN3-201ENST00000263666 DCTN4Q9UJW0 460 aa17.31■□□□□ 0.36
PDZRN3-201ENST00000263666 STK24Q9Y6E0 443 aa17.31■□□□□ 0.36
PDZRN3-201ENST00000263666 DUOX1Q9NRD9 1551 aa17.31■□□□□ 0.36
PDZRN3-201ENST00000263666 GJB6O95452 261 aa17.31■□□□□ 0.36
PDZRN3-201ENST00000263666 C4orf33Q8N1A6 199 aa17.31■□□□□ 0.36
PDZRN3-201ENST00000263666 DEPTORQ8TB45 409 aa17.31■□□□□ 0.36
PDZRN3-201ENST00000263666 KLF6Q99612 283 aaPredicted RBP17.31■□□□□ 0.36
PDZRN3-201ENST00000263666 TRIM7Q9C029 511 aa17.31■□□□□ 0.36
PDZRN3-201ENST00000263666 GOLGB1Q14789 3259 aaKnown RBP17.31■□□□□ 0.36
PDZRN3-201ENST00000263666 TMEM120BA0PK00 339 aa17.31■□□□□ 0.36
PDZRN3-201ENST00000263666 PYGMP11217 842 aa17.31■□□□□ 0.36
PDZRN3-201ENST00000263666 CHRNA3P32297 505 aa17.31■□□□□ 0.36
PDZRN3-201ENST00000263666 RPL21P46778 160 aaKnown RBP17.31■□□□□ 0.36
PDZRN3-201ENST00000263666 TRPC3Q13507 836 aa17.31■□□□□ 0.36
PDZRN3-201ENST00000263666 RUNDC3BQ96NL0 473 aa17.31■□□□□ 0.36
PDZRN3-201ENST00000263666 ACTR5Q9H9F9 607 aaPredicted RBP17.31■□□□□ 0.36
PDZRN3-201ENST00000263666 NYAP2Q9P242 653 aa17.31■□□□□ 0.36
PDZRN3-201ENST00000263666 SCP2P22307 547 aa17.3■□□□□ 0.36
PDZRN3-201ENST00000263666 POLGP54098 1239 aaPredicted RBP17.3■□□□□ 0.36
PDZRN3-201ENST00000263666 SLMAPQ14BN4 828 aa17.3■□□□□ 0.36
PDZRN3-201ENST00000263666 ZCWPW2Q504Y3 356 aa17.3■□□□□ 0.36
PDZRN3-201ENST00000263666 PRAMEF18Q5VWM3 479 aa17.3■□□□□ 0.36
PDZRN3-201ENST00000263666 SUGT1Q9Y2Z0 365 aa17.3■□□□□ 0.36
PDZRN3-201ENST00000263666 NEDD9Q14511 834 aa17.3■□□□□ 0.36
PDZRN3-201ENST00000263666 CALR3Q96L12 384 aaKnown RBP17.3■□□□□ 0.36
PDZRN3-201ENST00000263666 ZWILCHQ9H900 591 aa17.3■□□□□ 0.36
PDZRN3-201ENST00000263666 ADAM22Q9P0K1 906 aa17.3■□□□□ 0.36
PDZRN3-201ENST00000263666 RPS6KA5O75582 802 aa17.3■□□□□ 0.36
PDZRN3-201ENST00000263666 KRT1P04264 644 aa17.3■□□□□ 0.36
PDZRN3-201ENST00000263666 QARSP47897 775 aaKnown RBP17.3■□□□□ 0.36
PDZRN3-201ENST00000263666 ITIH3Q06033 890 aa17.3■□□□□ 0.36
PDZRN3-201ENST00000263666 BYSLQ13895 437 aaKnown RBP17.3■□□□□ 0.36
PDZRN3-201ENST00000263666 RASA3Q14644 834 aa17.3■□□□□ 0.36
PDZRN3-201ENST00000263666 FAM182AQ5T1J6 154 aa17.3■□□□□ 0.36
PDZRN3-201ENST00000263666 PHLDB3Q6NSJ2 640 aa17.3■□□□□ 0.36
PDZRN3-201ENST00000263666 CYB5D1Q6P9G0 228 aa17.3■□□□□ 0.36
PDZRN3-201ENST00000263666 RFX8Q6ZV50 586 aa17.3■□□□□ 0.36
PDZRN3-201ENST00000263666 ZNF720Q7Z2F6 126 aa17.3■□□□□ 0.36
PDZRN3-201ENST00000263666 ANKMY2Q8IV38 441 aa17.3■□□□□ 0.36
PDZRN3-201ENST00000263666 CCDC89Q8N998 374 aa17.3■□□□□ 0.36
PDZRN3-201ENST00000263666 SH3GL2Q99962 352 aa17.3■□□□□ 0.36
PDZRN3-201ENST00000263666 AS3MTQ9HBK9 375 aa17.3■□□□□ 0.36
PDZRN3-201ENST00000263666 RAB20Q9NX57 234 aa17.3■□□□□ 0.36
PDZRN3-201ENST00000263666 RNF181Q9P0P0 153 aa17.3■□□□□ 0.36
PDZRN3-201ENST00000263666 GRIN2DO15399 1336 aa17.3■□□□□ 0.36
PDZRN3-201ENST00000263666 MIF4GDA9UHW6 222 aaKnown RBP17.29■□□□□ 0.36
PDZRN3-201ENST00000263666 PODXLO00592 558 aa17.29■□□□□ 0.36
PDZRN3-201ENST00000263666 PHF2O75151 1096 aa17.29■□□□□ 0.36
PDZRN3-201ENST00000263666 ALDH3A1P30838 453 aa17.29■□□□□ 0.36
PDZRN3-201ENST00000263666 TGS1Q96RS0 853 aaKnown RBP17.29■□□□□ 0.36
PDZRN3-201ENST00000263666 PITPNM3Q9BZ71 974 aa17.29■□□□□ 0.36
PDZRN3-201ENST00000263666 KCNH7Q9NS40 1196 aa17.29■□□□□ 0.36
PDZRN3-201ENST00000263666 TGFB1I1O43294 461 aa17.29■□□□□ 0.36
PDZRN3-201ENST00000263666 SKOR1P84550 965 aa17.29■□□□□ 0.36
PDZRN3-201ENST00000263666 MPHOSPH6Q99547 160 aaKnown RBP17.29■□□□□ 0.36
PDZRN3-201ENST00000263666 PABPC3Q9H361 631 aaKnown RBP17.29■□□□□ 0.36
PDZRN3-201ENST00000263666 GABBR1Q9UBS5 961 aa17.29■□□□□ 0.36
PDZRN3-201ENST00000263666 TRAF3IP3Q9Y228 551 aa17.29■□□□□ 0.36
PDZRN3-201ENST00000263666 CASZ1Q86V15 1759 aa17.29■□□□□ 0.36
PDZRN3-201ENST00000263666 BCL9LQ86UU0 1499 aa17.29■□□□□ 0.36
PDZRN3-201ENST00000263666 TCRBV7S2A1N4TA0A589 114 aa17.29■□□□□ 0.36
PDZRN3-201ENST00000263666 SCTRP47872 440 aa17.29■□□□□ 0.36
PDZRN3-201ENST00000263666 DGKZQ13574 1117 aa17.29■□□□□ 0.36
PDZRN3-201ENST00000263666 SNRNP35Q16560 246 aaKnown RBP17.29■□□□□ 0.36
PDZRN3-201ENST00000263666 ASTE1Q2TB18 679 aaPredicted RBP17.29■□□□□ 0.36
PDZRN3-201ENST00000263666 BBS9Q3SYG4 887 aa17.29■□□□□ 0.36
PDZRN3-201ENST00000263666 GADL1Q6ZQY3 521 aa17.29■□□□□ 0.36
PDZRN3-201ENST00000263666 ZSWIM2Q8NEG5 633 aa17.29■□□□□ 0.36
PDZRN3-201ENST00000263666 KCNMB3Q9NPA1 279 aa17.29■□□□□ 0.36
PDZRN3-201ENST00000263666 MYH7P12883 1935 aa17.29■□□□□ 0.36
PDZRN3-201ENST00000263666 SLC16A3O15427 465 aaKnown RBP17.29■□□□□ 0.36
PDZRN3-201ENST00000263666 MARK3P27448 753 aa17.29■□□□□ 0.36
PDZRN3-201ENST00000263666 YWHABP31946 246 aaKnown RBP17.29■□□□□ 0.36
PDZRN3-201ENST00000263666 SREBF1P36956 1147 aa17.29■□□□□ 0.36
PDZRN3-201ENST00000263666 SWSAP1Q6NVH7 229 aa17.29■□□□□ 0.36
PDZRN3-201ENST00000263666 SCYL2Q6P3W7 929 aa17.29■□□□□ 0.36
PDZRN3-201ENST00000263666 LRIG3Q6UXM1 1119 aa17.29■□□□□ 0.36
PDZRN3-201ENST00000263666 ZNF662Q6ZS27 426 aa17.29■□□□□ 0.36
PDZRN3-201ENST00000263666 ATP8B4Q8TF62 1192 aa17.29■□□□□ 0.36
PDZRN3-201ENST00000263666 ECT2Q9H8V3 914 aa17.29■□□□□ 0.36
PDZRN3-201ENST00000263666 L3MBTL1Q9Y468 752 aa17.29■□□□□ 0.36
PDZRN3-201ENST00000263666 F5H423 210 aaPredicted RBP17.28■□□□□ 0.36
PDZRN3-201ENST00000263666 PIK3R2O00459 728 aa17.28■□□□□ 0.36
PDZRN3-201ENST00000263666 NFIBO00712 420 aa17.28■□□□□ 0.36
PDZRN3-201ENST00000263666 IRX4P78413 519 aa17.28■□□□□ 0.36
PDZRN3-201ENST00000263666 PPP3CAQ08209 521 aa17.28■□□□□ 0.36
PDZRN3-201ENST00000263666 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.28■□□□□ 0.36
PDZRN3-201ENST00000263666 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.28■□□□□ 0.36
PDZRN3-201ENST00000263666 CARD9Q9H257 536 aa17.28■□□□□ 0.36
PDZRN3-201ENST00000263666 P4HBP07237 508 aaKnown RBP17.28■□□□□ 0.36
PDZRN3-201ENST00000263666 TFAMQ00059 246 aaKnown RBP17.28■□□□□ 0.36
PDZRN3-201ENST00000263666 SPOPLQ6IQ16 392 aa17.28■□□□□ 0.36
PDZRN3-201ENST00000263666 TAS1R2Q8TE23 839 aa17.28■□□□□ 0.36
PDZRN3-201ENST00000263666 WDR18Q9BV38 432 aa17.28■□□□□ 0.36
PDZRN3-201ENST00000263666 N4BP2Q86UW6 1770 aaPredicted RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms