RNA–Protein interactions for RNA: ENST00000262675.11

TTC39A-201, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39A, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-201ENST00000262675 SMAD2Q15796 467 aaKnown RBP10.53□□□□□ -0.72
TTC39A-201ENST00000262675 GRIK4Q16099 956 aa10.53□□□□□ -0.72
TTC39A-201ENST00000262675 CTC1Q2NKJ3 1217 aa10.53□□□□□ -0.72
TTC39A-201ENST00000262675 PPP4R3AQ6IN85 833 aa10.53□□□□□ -0.72
TTC39A-201ENST00000262675 CENPPQ6IPU0 288 aa10.53□□□□□ -0.72
TTC39A-201ENST00000262675 NPAS4Q8IUM7 802 aa10.53□□□□□ -0.72
TTC39A-201ENST00000262675 NME8Q8N427 588 aa10.53□□□□□ -0.72
TTC39A-201ENST00000262675 ACRBPQ8NEB7 543 aa10.53□□□□□ -0.72
TTC39A-201ENST00000262675 TBCKQ8TEA7 893 aa10.53□□□□□ -0.72
TTC39A-201ENST00000262675 KHSRPQ92945 711 aaKnown RBP eCLIP10.53□□□□□ -0.72
TTC39A-201ENST00000262675 MFSD14AQ96MC6 490 aa10.53□□□□□ -0.72
TTC39A-201ENST00000262675 MTMR9Q96QG7 549 aa10.53□□□□□ -0.72
TTC39A-201ENST00000262675 EIF3CQ99613 913 aaKnown RBP10.53□□□□□ -0.72
TTC39A-201ENST00000262675 TTYH3Q9C0H2 523 aa10.53□□□□□ -0.72
TTC39A-201ENST00000262675 PSTPIP2Q9H939 334 aa10.53□□□□□ -0.72
TTC39A-201ENST00000262675 MYO6Q9UM54 1294 aa10.53□□□□□ -0.72
TTC39A-201ENST00000262675 FAM86C2PA6NEL3 165 aa10.53□□□□□ -0.72
TTC39A-201ENST00000262675 SPDYE3A6NKU9 549 aa10.53□□□□□ -0.72
TTC39A-201ENST00000262675 ENPP3O14638 875 aa10.53□□□□□ -0.72
TTC39A-201ENST00000262675 MAP2K7O14733 419 aa10.53□□□□□ -0.72
TTC39A-201ENST00000262675 MEIS2O14770 477 aa10.53□□□□□ -0.72
TTC39A-201ENST00000262675 GCFC2P16383 781 aaKnown RBP10.53□□□□□ -0.72
TTC39A-201ENST00000262675 KCNA2P16389 499 aa10.53□□□□□ -0.72
TTC39A-201ENST00000262675 TRIM21P19474 475 aaKnown RBP10.53□□□□□ -0.72
TTC39A-201ENST00000262675 HNRNPH3P31942 346 aaKnown RBP10.53□□□□□ -0.72
TTC39A-201ENST00000262675 SLC26A2P50443 739 aa10.53□□□□□ -0.72
TTC39A-201ENST00000262675 ADCY7P51828 1080 aa10.53□□□□□ -0.72
TTC39A-201ENST00000262675 MRPS6P82932 125 aaKnown RBP10.53□□□□□ -0.72
TTC39A-201ENST00000262675 MTMR1Q13613 665 aa10.53□□□□□ -0.72
TTC39A-201ENST00000262675 LPIN1Q14693 890 aa10.53□□□□□ -0.72
TTC39A-201ENST00000262675 FBXO47Q5MNV8 452 aa10.53□□□□□ -0.72
TTC39A-201ENST00000262675 MCTP2Q6DN12 878 aa10.53□□□□□ -0.72
TTC39A-201ENST00000262675 HDXQ7Z353 690 aa10.53□□□□□ -0.72
TTC39A-201ENST00000262675 GUF1Q8N442 669 aaKnown RBP10.53□□□□□ -0.72
TTC39A-201ENST00000262675 GLG1Q92896 1179 aa10.53□□□□□ -0.72
TTC39A-201ENST00000262675 ZNF689Q96CS4 500 aaPredicted RBP10.53□□□□□ -0.72
TTC39A-201ENST00000262675 CDK5RAP3Q96JB5 506 aa10.53□□□□□ -0.72
TTC39A-201ENST00000262675 PRRX2Q99811 253 aa10.53□□□□□ -0.72
TTC39A-201ENST00000262675 DUSP9Q99956 384 aaKnown RBP10.53□□□□□ -0.72
TTC39A-201ENST00000262675 ACBD3Q9H3P7 528 aa10.53□□□□□ -0.72
TTC39A-201ENST00000262675 AZI2Q9H6S1 392 aa10.53□□□□□ -0.72
TTC39A-201ENST00000262675 RC3H2Q9HBD1 1191 aaKnown RBP10.53□□□□□ -0.72
TTC39A-201ENST00000262675 RIC8AQ9NPQ8 531 aa10.53□□□□□ -0.72
TTC39A-201ENST00000262675 TTC3P53804 2025 aa10.53□□□□□ -0.72
TTC39A-201ENST00000262675 TRIM49BA6NDI0 452 aa10.52□□□□□ -0.72
TTC39A-201ENST00000262675 H3BQ06 376 aaPredicted RBP10.52□□□□□ -0.72
TTC39A-201ENST00000262675 DGKIO75912 1065 aa10.52□□□□□ -0.72
TTC39A-201ENST00000262675 GHRP10912 638 aa10.52□□□□□ -0.72
TTC39A-201ENST00000262675 AMPD2Q01433 879 aa10.52□□□□□ -0.72
TTC39A-201ENST00000262675 CALCRLQ16602 461 aa10.52□□□□□ -0.72
TTC39A-201ENST00000262675 LONRF2Q1L5Z9 754 aa10.52□□□□□ -0.72
TTC39A-201ENST00000262675 IQCEQ6IPM2 695 aa10.52□□□□□ -0.72
TTC39A-201ENST00000262675 WDR93Q6P2C0 686 aa10.52□□□□□ -0.72
TTC39A-201ENST00000262675 EP400NLQ6ZTU2 488 aa10.52□□□□□ -0.72
TTC39A-201ENST00000262675 TRIM50Q86XT4 487 aa10.52□□□□□ -0.72
TTC39A-201ENST00000262675 CNOT6LQ96LI5 555 aaKnown RBP10.52□□□□□ -0.72
TTC39A-201ENST00000262675 FUT8Q9BYC5 575 aa10.52□□□□□ -0.72
TTC39A-201ENST00000262675 IRX2Q9BZI1 471 aaPredicted RBP10.52□□□□□ -0.72
TTC39A-201ENST00000262675 LRWD1Q9UFC0 647 aa10.52□□□□□ -0.72
TTC39A-201ENST00000262675 MAPK8IP1Q9UQF2 711 aa10.52□□□□□ -0.72
TTC39A-201ENST00000262675 UBIAD1Q9Y5Z9 338 aa10.52□□□□□ -0.72
TTC39A-201ENST00000262675 NFASCO94856 1347 aa10.52□□□□□ -0.73
TTC39A-201ENST00000262675 PP2D1A8MPX8 630 aa10.52□□□□□ -0.73
TTC39A-201ENST00000262675 MTIF2P46199 727 aaKnown RBP10.52□□□□□ -0.73
TTC39A-201ENST00000262675 PMS1P54277 932 aaKnown RBP10.52□□□□□ -0.73
TTC39A-201ENST00000262675 SMC1AQ14683 1233 aaKnown RBP10.52□□□□□ -0.73
TTC39A-201ENST00000262675 PAPD7Q5XG87 772 aaKnown RBP10.52□□□□□ -0.73
TTC39A-201ENST00000262675 KRT79Q5XKE5 535 aa10.52□□□□□ -0.73
TTC39A-201ENST00000262675 USP17L6PQ6QN14 398 aa10.52□□□□□ -0.73
TTC39A-201ENST00000262675 PLPPR4Q7Z2D5 763 aa10.52□□□□□ -0.73
TTC39A-201ENST00000262675 TRAPPC11Q7Z392 1133 aa10.52□□□□□ -0.73
TTC39A-201ENST00000262675 LARP4BQ92615 738 aaKnown RBP10.52□□□□□ -0.73
TTC39A-201ENST00000262675 RUBCNQ92622 972 aa10.52□□□□□ -0.73
TTC39A-201ENST00000262675 JADE2Q9NQC1 790 aa10.52□□□□□ -0.73
TTC39A-201ENST00000262675 CD207Q9UJ71 328 aa10.52□□□□□ -0.73
TTC39A-201ENST00000262675 TRPV2Q9Y5S1 764 aa10.52□□□□□ -0.73
TTC39A-201ENST00000262675 CDY2AQ9Y6F7 541 aa10.52□□□□□ -0.73
TTC39A-201ENST00000262675 MUC3AQ02505 3323 aa10.52□□□□□ -0.73
TTC39A-201ENST00000262675 KDM3AQ9Y4C1 1321 aa10.51□□□□□ -0.73
TTC39A-201ENST00000262675 GSTTP1A0A1W2PQM5 241 aa10.51□□□□□ -0.73
TTC39A-201ENST00000262675 PES1O00541 588 aaKnown RBP10.51□□□□□ -0.73
TTC39A-201ENST00000262675 USO1O60763 962 aaKnown RBP10.51□□□□□ -0.73
TTC39A-201ENST00000262675 FOSP01100 380 aaPredicted RBP10.51□□□□□ -0.73
TTC39A-201ENST00000262675 TECP42680 631 aa10.51□□□□□ -0.73
TTC39A-201ENST00000262675 SP4Q02446 784 aa10.51□□□□□ -0.73
TTC39A-201ENST00000262675 UBE3AQ05086 875 aa10.51□□□□□ -0.73
TTC39A-201ENST00000262675 MAP9Q49MG5 647 aa10.51□□□□□ -0.73
TTC39A-201ENST00000262675 HERC4Q5GLZ8 1057 aaPredicted RBP10.51□□□□□ -0.73
TTC39A-201ENST00000262675 ANKRD40Q6AI12 368 aa10.51□□□□□ -0.73
TTC39A-201ENST00000262675 PDE12Q6L8Q7 609 aaKnown RBP10.51□□□□□ -0.73
TTC39A-201ENST00000262675 KIAA1328Q86T90 577 aa10.51□□□□□ -0.73
TTC39A-201ENST00000262675 ZFP91Q96JP5 570 aaPredicted RBP10.51□□□□□ -0.73
TTC39A-201ENST00000262675 UIMC1Q96RL1 719 aa10.51□□□□□ -0.73
TTC39A-201ENST00000262675 TSG101Q99816 390 aa10.51□□□□□ -0.73
TTC39A-201ENST00000262675 MMTAG2Q9BU76 263 aaKnown RBP10.51□□□□□ -0.73
TTC39A-201ENST00000262675 NT5C3AQ9H0P0 336 aa10.51□□□□□ -0.73
TTC39A-201ENST00000262675 NUCKS1Q9H1E3 243 aaKnown RBP10.51□□□□□ -0.73
TTC39A-201ENST00000262675 BCAS3Q9H6U6 928 aa10.51□□□□□ -0.73
TTC39A-201ENST00000262675 ANKZF1Q9H8Y5 726 aa10.51□□□□□ -0.73
TTC39A-201ENST00000262675 JPH1Q9HDC5 661 aaPredicted RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms