RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 TMPRSS15P98073 1019 aa12.91□□□□□ -0.34
SPG11-201ENST00000261866 ZNF235Q14590 738 aa12.91□□□□□ -0.34
SPG11-201ENST00000261866 PHLDB3Q6NSJ2 640 aa12.91□□□□□ -0.34
SPG11-201ENST00000261866 GPRC5AQ8NFJ5 357 aa12.91□□□□□ -0.34
SPG11-201ENST00000261866 TAAR1Q96RJ0 339 aa12.91□□□□□ -0.34
SPG11-201ENST00000261866 SMAD5Q99717 465 aaKnown RBP12.91□□□□□ -0.34
SPG11-201ENST00000261866 PI4K2AQ9BTU6 479 aa12.91□□□□□ -0.34
SPG11-201ENST00000261866 PRG3Q9Y2Y8 225 aaPredicted RBP12.91□□□□□ -0.34
SPG11-201ENST00000261866 PCDHB7Q9Y5E2 793 aa12.91□□□□□ -0.34
SPG11-201ENST00000261866 NPTXRO95502 500 aa12.91□□□□□ -0.34
SPG11-201ENST00000261866 PPARGP37231 505 aaPredicted RBP12.91□□□□□ -0.34
SPG11-201ENST00000261866 DUOXA2Q1HG44 320 aa12.91□□□□□ -0.34
SPG11-201ENST00000261866 MUC3BQ9H195 1237 aa12.91□□□□□ -0.34
SPG11-201ENST00000261866 KIAA1586Q9HCI6 787 aa12.91□□□□□ -0.34
SPG11-201ENST00000261866 HSPBP1Q9NZL4 362 aa12.91□□□□□ -0.34
SPG11-201ENST00000261866 TET3O43151 1660 aa12.91□□□□□ -0.34
SPG11-201ENST00000261866 IQANK1A0A1B0GTG1 560 aa12.91□□□□□ -0.34
SPG11-201ENST00000261866 CALB1P05937 261 aa12.91□□□□□ -0.34
SPG11-201ENST00000261866 E2F5Q15329 346 aa12.91□□□□□ -0.34
SPG11-201ENST00000261866 SLC15A2Q16348 729 aa12.91□□□□□ -0.34
SPG11-201ENST00000261866 CCDC138Q96M89 665 aa12.91□□□□□ -0.34
SPG11-201ENST00000261866 ZNF512Q96ME7 567 aaPredicted RBP12.91□□□□□ -0.34
SPG11-201ENST00000261866 SMYD3Q9H7B4 428 aa12.91□□□□□ -0.34
SPG11-201ENST00000261866 ABCB6Q9NP58 842 aa12.91□□□□□ -0.34
SPG11-201ENST00000261866 FBXO28Q9NVF7 368 aa12.91□□□□□ -0.34
SPG11-201ENST00000261866 FAF1Q9UNN5 650 aaPredicted RBP12.91□□□□□ -0.34
SPG11-201ENST00000261866 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.91□□□□□ -0.34
SPG11-201ENST00000261866 A0A1B0GUA9 196 aa12.91□□□□□ -0.34
SPG11-201ENST00000261866 THPOP40225 353 aa12.91□□□□□ -0.34
SPG11-201ENST00000261866 COBLL1Q53SF7 1204 aa12.91□□□□□ -0.34
SPG11-201ENST00000261866 COL23A1Q86Y22 540 aaPredicted RBP12.91□□□□□ -0.34
SPG11-201ENST00000261866 DPF3Q92784 378 aa12.91□□□□□ -0.34
SPG11-201ENST00000261866 EIF4E1BA6NMX2 242 aaKnown RBP12.91□□□□□ -0.34
SPG11-201ENST00000261866 SOX11P35716 441 aa12.91□□□□□ -0.34
SPG11-201ENST00000261866 PRKCEQ02156 737 aa12.91□□□□□ -0.34
SPG11-201ENST00000261866 SHC4Q6S5L8 630 aa12.91□□□□□ -0.34
SPG11-201ENST00000261866 PLEKHA5Q9HAU0 1116 aa12.91□□□□□ -0.34
SPG11-201ENST00000261866 ROR1Q01973 937 aa12.91□□□□□ -0.34
SPG11-201ENST00000261866 ZNF543Q08ER8 600 aa12.91□□□□□ -0.34
SPG11-201ENST00000261866 EPC2Q52LR7 807 aa12.91□□□□□ -0.34
SPG11-201ENST00000261866 NEK9Q8TD19 979 aa12.91□□□□□ -0.34
SPG11-201ENST00000261866 REEP2Q9BRK0 252 aa12.91□□□□□ -0.34
SPG11-201ENST00000261866 EPC1Q9H2F5 836 aa12.91□□□□□ -0.34
SPG11-201ENST00000261866 STAP1Q9ULZ2 295 aa12.91□□□□□ -0.34
SPG11-201ENST00000261866 A6NNZ2 444 aa12.9□□□□□ -0.34
SPG11-201ENST00000261866 TUBB8Q3ZCM7 444 aa12.9□□□□□ -0.34
SPG11-201ENST00000261866 BZW1Q7L1Q6 419 aaKnown RBP12.9□□□□□ -0.34
SPG11-201ENST00000261866 RHOT2Q8IXI1 618 aa12.9□□□□□ -0.34
SPG11-201ENST00000261866 CCDC33Q8N5R6 958 aa12.9□□□□□ -0.34
SPG11-201ENST00000261866 ULK4Q96C45 1275 aa12.9□□□□□ -0.34
SPG11-201ENST00000261866 CPA4Q9UI42 421 aa12.9□□□□□ -0.34
SPG11-201ENST00000261866 ADCY10Q96PN6 1610 aa12.9□□□□□ -0.34
SPG11-201ENST00000261866 COPEO14579 308 aa12.9□□□□□ -0.34
SPG11-201ENST00000261866 TAC1P20366 129 aa12.9□□□□□ -0.34
SPG11-201ENST00000261866 PRAMEP78395 509 aa12.9□□□□□ -0.34
SPG11-201ENST00000261866 EMC2Q15006 297 aa12.9□□□□□ -0.34
SPG11-201ENST00000261866 HAUS8Q9BT25 410 aa12.9□□□□□ -0.34
SPG11-201ENST00000261866 ORC6Q9Y5N6 252 aa12.9□□□□□ -0.34
SPG11-201ENST00000261866 NR3C2P08235 984 aa12.9□□□□□ -0.34
SPG11-201ENST00000261866 WEE2P0C1S8 567 aa12.9□□□□□ -0.34
SPG11-201ENST00000261866 YY1P25490 414 aa12.9□□□□□ -0.34
SPG11-201ENST00000261866 PAPOLAP51003 745 aaKnown RBP12.9□□□□□ -0.34
SPG11-201ENST00000261866 IL31Q6EBC2 164 aa12.9□□□□□ -0.34
SPG11-201ENST00000261866 ZBED8Q8IZ13 594 aa12.9□□□□□ -0.34
SPG11-201ENST00000261866 C1orf167Q5SNV9 1468 aa12.9□□□□□ -0.34
SPG11-201ENST00000261866 LGALS16A8MUM7 142 aa12.9□□□□□ -0.34
SPG11-201ENST00000261866 ITGA4P13612 1032 aa12.9□□□□□ -0.34
SPG11-201ENST00000261866 KPNA2P52292 529 aaKnown RBP12.9□□□□□ -0.34
SPG11-201ENST00000261866 TMEM132DQ14C87 1099 aa12.9□□□□□ -0.34
SPG11-201ENST00000261866 PID1Q7Z2X4 250 aa12.9□□□□□ -0.34
SPG11-201ENST00000261866 CASS4Q9NQ75 786 aa12.9□□□□□ -0.34
SPG11-201ENST00000261866 ZNF34Q8IZ26 560 aa12.9□□□□□ -0.34
SPG11-201ENST00000261866 NTSR2O95665 410 aa12.9□□□□□ -0.35
SPG11-201ENST00000261866 HLA-DPA1P20036 260 aa12.9□□□□□ -0.35
SPG11-201ENST00000261866 DAB2P98082 770 aa12.9□□□□□ -0.35
SPG11-201ENST00000261866 SLC25A41Q8N5S1 370 aa12.9□□□□□ -0.35
SPG11-201ENST00000261866 VPS39Q96JC1 886 aa12.9□□□□□ -0.35
SPG11-201ENST00000261866 PANX2Q96RD6 677 aa12.9□□□□□ -0.35
SPG11-201ENST00000261866 ARL4CP56559 192 aa12.89□□□□□ -0.35
SPG11-201ENST00000261866 RFX8Q6ZV50 586 aa12.89□□□□□ -0.35
SPG11-201ENST00000261866 ADCK2Q7Z695 626 aa12.89□□□□□ -0.35
SPG11-201ENST00000261866 TBXAS1P24557 533 aaPredicted RBP12.89□□□□□ -0.35
SPG11-201ENST00000261866 ERFP50548 548 aa12.89□□□□□ -0.35
SPG11-201ENST00000261866 PDIA2Q13087 525 aaKnown RBP12.89□□□□□ -0.35
SPG11-201ENST00000261866 ATP11CQ8NB49 1132 aa12.89□□□□□ -0.35
SPG11-201ENST00000261866 ACSF2Q96CM8 615 aaPredicted RBP12.89□□□□□ -0.35
SPG11-201ENST00000261866 DDX47Q9H0S4 455 aaKnown RBP12.89□□□□□ -0.35
SPG11-201ENST00000261866 STK36Q9NRP7 1315 aa12.89□□□□□ -0.35
SPG11-201ENST00000261866 ATMINO43313 823 aaPredicted RBP12.89□□□□□ -0.35
SPG11-201ENST00000261866 CYP2C9P11712 490 aa12.89□□□□□ -0.35
SPG11-201ENST00000261866 EPHA7Q15375 998 aa12.89□□□□□ -0.35
SPG11-201ENST00000261866 DEFB128Q7Z7B8 93 aa12.89□□□□□ -0.35
SPG11-201ENST00000261866 RBM41Q96IZ5 413 aaKnown RBP12.89□□□□□ -0.35
SPG11-201ENST00000261866 EPS15L1Q9UBC2 864 aa12.89□□□□□ -0.35
SPG11-201ENST00000261866 CSE1LP55060 971 aaKnown RBP12.89□□□□□ -0.35
SPG11-201ENST00000261866 BCAR1P56945 870 aa12.89□□□□□ -0.35
SPG11-201ENST00000261866 TPI1P60174 286 aa12.89□□□□□ -0.35
SPG11-201ENST00000261866 PPP1R2P3Q6NXS1 205 aa12.89□□□□□ -0.35
SPG11-201ENST00000261866 RABGGTAQ92696 567 aa12.89□□□□□ -0.35
SPG11-201ENST00000261866 SMARCAD1Q9H4L7 1026 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms