RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 KCNJ2P63252 427 aa17.25■□□□□ 0.35
SREBF1-201ENST00000261646 EVX2Q03828 476 aa17.25■□□□□ 0.35
SREBF1-201ENST00000261646 PDCD2Q16342 344 aaPredicted RBP17.25■□□□□ 0.35
SREBF1-201ENST00000261646 WDR75Q8IWA0 830 aaKnown RBP17.25■□□□□ 0.35
SREBF1-201ENST00000261646 NEDD1Q8NHV4 660 aa17.25■□□□□ 0.35
SREBF1-201ENST00000261646 ANLNQ9NQW6 1124 aa17.25■□□□□ 0.35
SREBF1-201ENST00000261646 RIMBP3CA6NJZ7 1639 aa17.24■□□□□ 0.35
SREBF1-201ENST00000261646 RIMBP3BA6NNM3 1639 aa17.24■□□□□ 0.35
SREBF1-201ENST00000261646 RIMBP3Q9UFD9 1639 aa17.24■□□□□ 0.35
SREBF1-201ENST00000261646 CCDC195A0A1B0GUA6 201 aa17.24■□□□□ 0.35
SREBF1-201ENST00000261646 WNT7AO00755 349 aa17.24■□□□□ 0.35
SREBF1-201ENST00000261646 VHLP40337 213 aa17.24■□□□□ 0.35
SREBF1-201ENST00000261646 CPA2P48052 419 aa17.24■□□□□ 0.35
SREBF1-201ENST00000261646 NFIXQ14938 502 aa17.24■□□□□ 0.35
SREBF1-201ENST00000261646 CLEC4GQ6UXB4 293 aa17.24■□□□□ 0.35
SREBF1-201ENST00000261646 MORC4Q8TE76 937 aa17.24■□□□□ 0.35
SREBF1-201ENST00000261646 SERPINB12Q96P63 405 aa17.24■□□□□ 0.35
SREBF1-201ENST00000261646 MCF2LO15068 1137 aa17.24■□□□□ 0.35
SREBF1-201ENST00000261646 LPXNO60711 386 aa17.24■□□□□ 0.35
SREBF1-201ENST00000261646 ENO1P06733 434 aaKnown RBP17.24■□□□□ 0.35
SREBF1-201ENST00000261646 NT5C2P49902 561 aa17.24■□□□□ 0.35
SREBF1-201ENST00000261646 PEX3P56589 373 aa17.24■□□□□ 0.35
SREBF1-201ENST00000261646 ASPHQ12797 758 aa17.24■□□□□ 0.35
SREBF1-201ENST00000261646 KRT80Q6KB66 452 aa17.24■□□□□ 0.35
SREBF1-201ENST00000261646 NLRX1Q86UT6 975 aa17.24■□□□□ 0.35
SREBF1-201ENST00000261646 MREGQ8N565 214 aa17.24■□□□□ 0.35
SREBF1-201ENST00000261646 CHURC1Q8WUH1 139 aa17.24■□□□□ 0.35
SREBF1-201ENST00000261646 OLFM3Q96PB7 478 aa17.24■□□□□ 0.35
SREBF1-201ENST00000261646 ANKFY1Q9P2R3 1169 aa17.24■□□□□ 0.35
SREBF1-201ENST00000261646 CAPN9O14815 690 aa17.24■□□□□ 0.35
SREBF1-201ENST00000261646 KRT37O76014 449 aa17.24■□□□□ 0.35
SREBF1-201ENST00000261646 NTSR2O95665 410 aa17.24■□□□□ 0.35
SREBF1-201ENST00000261646 PON1P27169 355 aa17.24■□□□□ 0.35
SREBF1-201ENST00000261646 DEPTORQ8TB45 409 aa17.24■□□□□ 0.35
SREBF1-201ENST00000261646 ARHGEF1Q92888 912 aaKnown RBP17.24■□□□□ 0.35
SREBF1-201ENST00000261646 LRGUKQ96M69 825 aa17.24■□□□□ 0.35
SREBF1-201ENST00000261646 SENP1Q9P0U3 644 aa17.24■□□□□ 0.35
SREBF1-201ENST00000261646 MCM8Q9UJA3 840 aa17.24■□□□□ 0.35
SREBF1-201ENST00000261646 RTN2O75298 545 aa17.23■□□□□ 0.35
SREBF1-201ENST00000261646 HNRNPCP07910 306 aaKnown RBP eCLIP17.23■□□□□ 0.35
SREBF1-201ENST00000261646 ARHGAP27Q6ZUM4 889 aa17.23■□□□□ 0.35
SREBF1-201ENST00000261646 ADGRF4Q8IZF3 695 aa17.23■□□□□ 0.35
SREBF1-201ENST00000261646 MOV10L1Q9BXT6 1211 aaKnown RBP17.23■□□□□ 0.35
SREBF1-201ENST00000261646 CDC42EP4Q9H3Q1 356 aaKnown RBP17.23■□□□□ 0.35
SREBF1-201ENST00000261646 SMG5Q9UPR3 1016 aaKnown RBP17.23■□□□□ 0.35
SREBF1-201ENST00000261646 SIK3Q9Y2K2 1263 aa17.23■□□□□ 0.35
SREBF1-201ENST00000261646 MRPL11Q9Y3B7 192 aaKnown RBP17.23■□□□□ 0.35
SREBF1-201ENST00000261646 TCP10L2B9ZVM9 353 aa17.23■□□□□ 0.35
SREBF1-201ENST00000261646 SLC37A4O43826 429 aa17.23■□□□□ 0.35
SREBF1-201ENST00000261646 MX2P20592 715 aa17.23■□□□□ 0.35
SREBF1-201ENST00000261646 ARSEP51690 589 aa17.23■□□□□ 0.35
SREBF1-201ENST00000261646 OVGP1Q12889 678 aa17.23■□□□□ 0.35
SREBF1-201ENST00000261646 DARS2Q6PI48 645 aaKnown RBP17.23■□□□□ 0.35
SREBF1-201ENST00000261646 C3orf67Q6ZVT6 689 aa17.23■□□□□ 0.35
SREBF1-201ENST00000261646 PPM1NQ8N819 430 aa17.23■□□□□ 0.35
SREBF1-201ENST00000261646 TCRBV5S4A2TA0A5A2 114 aa17.23■□□□□ 0.35
SREBF1-201ENST00000261646 DKC1O60832 514 aaKnown RBP eCLIP17.23■□□□□ 0.355e-7■■■■□ 19.3
SREBF1-201ENST00000261646 ACCSLQ4AC99 568 aa17.23■□□□□ 0.35
SREBF1-201ENST00000261646 FAM81BQ96LP2 452 aa17.23■□□□□ 0.35
SREBF1-201ENST00000261646 SLC13A1Q9BZW2 595 aa17.23■□□□□ 0.35
SREBF1-201ENST00000261646 CD209Q9NNX6 404 aa17.23■□□□□ 0.35
SREBF1-201ENST00000261646 PHTF1Q9UMS5 762 aa17.23■□□□□ 0.35
SREBF1-201ENST00000261646 PI4K2BG5E9Z4 385 aa17.22■□□□□ 0.35
SREBF1-201ENST00000261646 STK10O94804 968 aaKnown RBP17.22■□□□□ 0.35
SREBF1-201ENST00000261646 P3H1Q32P28 736 aa17.22■□□□□ 0.35
SREBF1-201ENST00000261646 BTNL9Q6UXG8 535 aa17.22■□□□□ 0.35
SREBF1-201ENST00000261646 SLC13A5Q86YT5 568 aaPredicted RBP17.22■□□□□ 0.35
SREBF1-201ENST00000261646 RXFP1Q9HBX9 757 aa17.22■□□□□ 0.35
SREBF1-201ENST00000261646 B2RBV5 119 aa17.22■□□□□ 0.35
SREBF1-201ENST00000261646 ALAS1P13196 640 aa17.22■□□□□ 0.35
SREBF1-201ENST00000261646 ESRRGP62508 458 aa17.22■□□□□ 0.35
SREBF1-201ENST00000261646 MED21Q13503 144 aa17.22■□□□□ 0.35
SREBF1-201ENST00000261646 NKX1-1Q15270 411 aaPredicted RBP17.22■□□□□ 0.35
SREBF1-201ENST00000261646 ZNF662Q6ZS27 426 aa17.22■□□□□ 0.35
SREBF1-201ENST00000261646 SLC4A9Q96Q91 983 aa17.22■□□□□ 0.35
SREBF1-201ENST00000261646 THTPAQ9BU02 230 aa17.22■□□□□ 0.35
SREBF1-201ENST00000261646 ZWILCHQ9H900 591 aa17.22■□□□□ 0.35
SREBF1-201ENST00000261646 KMT5AQ9NQR1 393 aa17.22■□□□□ 0.35
SREBF1-201ENST00000261646 AP1G2O75843 785 aa17.22■□□□□ 0.35
SREBF1-201ENST00000261646 CD58P19256 250 aa17.22■□□□□ 0.35
SREBF1-201ENST00000261646 TNFRSF8P28908 595 aa17.22■□□□□ 0.35
SREBF1-201ENST00000261646 ERMARDQ5T6L9 678 aa17.22■□□□□ 0.35
SREBF1-201ENST00000261646 NKX2-3Q8TAU0 364 aa17.22■□□□□ 0.35
SREBF1-201ENST00000261646 HIC2Q96JB3 615 aa17.22■□□□□ 0.35
SREBF1-201ENST00000261646 PCDHGC5Q9Y5F6 944 aa17.22■□□□□ 0.35
SREBF1-201ENST00000261646 CLRN2A0PK11 232 aa17.21■□□□□ 0.35
SREBF1-201ENST00000261646 LRRIQ4A6NIV6 560 aa17.21■□□□□ 0.35
SREBF1-201ENST00000261646 ZNF263O14978 683 aa17.21■□□□□ 0.35
SREBF1-201ENST00000261646 DRD4P21917 467 aa17.21■□□□□ 0.35
SREBF1-201ENST00000261646 MAGEA4P43358 317 aa17.21■□□□□ 0.35
SREBF1-201ENST00000261646 FXR2P51116 673 aaKnown RBP eCLIP17.21■□□□□ 0.35
SREBF1-201ENST00000261646 DEUP1Q05D60 604 aa17.21■□□□□ 0.35
SREBF1-201ENST00000261646 GRAPQ13588 217 aa17.21■□□□□ 0.35
SREBF1-201ENST00000261646 QRICH1Q2TAL8 776 aa17.21■□□□□ 0.35
SREBF1-201ENST00000261646 ZC2HC1CQ53FD0 456 aaPredicted RBP17.21■□□□□ 0.35
SREBF1-201ENST00000261646 LVRNQ6Q4G3 990 aa17.21■□□□□ 0.35
SREBF1-201ENST00000261646 GRAPLQ8TC17 118 aaPredicted RBP17.21■□□□□ 0.35
SREBF1-201ENST00000261646 ATG4AQ8WYN0 398 aa17.21■□□□□ 0.35
SREBF1-201ENST00000261646 CDKL2Q92772 493 aa17.21■□□□□ 0.35
SREBF1-201ENST00000261646 FAM20AQ96MK3 541 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms