RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 ANKRD63C9JTQ0 380 aa10.79□□□□□ -0.68
PALB2-201ENST00000261584 ZBED4O75132 1171 aa10.79□□□□□ -0.68
PALB2-201ENST00000261584 RALAP11233 206 aa10.79□□□□□ -0.68
PALB2-201ENST00000261584 GCFC2P16383 781 aaKnown RBP10.79□□□□□ -0.68
PALB2-201ENST00000261584 LIG4P49917 911 aa10.79□□□□□ -0.68
PALB2-201ENST00000261584 MTERF2Q49AM1 385 aa10.79□□□□□ -0.68
PALB2-201ENST00000261584 SBK1Q52WX2 424 aa10.79□□□□□ -0.68
PALB2-201ENST00000261584 FIGNQ5HY92 759 aa10.79□□□□□ -0.68
PALB2-201ENST00000261584 LIN9Q5TKA1 542 aa10.79□□□□□ -0.68
PALB2-201ENST00000261584 ARMC3Q5W041 872 aa10.79□□□□□ -0.68
PALB2-201ENST00000261584 CBWD2Q8IUF1 395 aa10.79□□□□□ -0.68
PALB2-201ENST00000261584 ARHGEF19Q8IW93 802 aa10.79□□□□□ -0.68
PALB2-201ENST00000261584 SLC25A41Q8N5S1 370 aa10.79□□□□□ -0.68
PALB2-201ENST00000261584 LNX1Q8TBB1 728 aaPredicted RBP10.79□□□□□ -0.68
PALB2-201ENST00000261584 SLC35C1Q96A29 364 aa10.79□□□□□ -0.68
PALB2-201ENST00000261584 CEP170P1Q96L14 293 aa10.79□□□□□ -0.68
PALB2-201ENST00000261584 TEKT3Q9BXF9 490 aa10.79□□□□□ -0.68
PALB2-201ENST00000261584 PPARGC1AQ9UBK2 798 aaKnown RBP10.79□□□□□ -0.68
PALB2-201ENST00000261584 NWD1Q149M9 1564 aa10.78□□□□□ -0.68
PALB2-201ENST00000261584 MSH4O15457 936 aa10.78□□□□□ -0.68
PALB2-201ENST00000261584 GYG2O15488 501 aa10.78□□□□□ -0.68
PALB2-201ENST00000261584 FSBPO95073 299 aa10.78□□□□□ -0.68
PALB2-201ENST00000261584 SERPINB6P35237 376 aa10.78□□□□□ -0.68
PALB2-201ENST00000261584 SPOPLQ6IQ16 392 aa10.78□□□□□ -0.68
PALB2-201ENST00000261584 ATP8B4Q8TF62 1192 aa10.78□□□□□ -0.68
PALB2-201ENST00000261584 ATXN7L3BQ96GX2 97 aa10.78□□□□□ -0.68
PALB2-201ENST00000261584 MAK16Q9BXY0 300 aaKnown RBP10.78□□□□□ -0.68
PALB2-201ENST00000261584 EHMT1Q9H9B1 1298 aa10.78□□□□□ -0.68
PALB2-201ENST00000261584 ETS1P14921 441 aa10.78□□□□□ -0.68
PALB2-201ENST00000261584 NQO1P15559 274 aaKnown RBP10.78□□□□□ -0.68
PALB2-201ENST00000261584 FXR2P51116 673 aaKnown RBP eCLIP10.78□□□□□ -0.685e-6■■■□□ 14.9
PALB2-201ENST00000261584 MFAP3P55082 362 aa10.78□□□□□ -0.68
PALB2-201ENST00000261584 KCNT1Q5JUK3 1230 aa10.78□□□□□ -0.68
PALB2-201ENST00000261584 THEMIS2Q5TEJ8 643 aa10.78□□□□□ -0.68
PALB2-201ENST00000261584 FAXCQ5TGI0 409 aa10.78□□□□□ -0.68
PALB2-201ENST00000261584 ANKRD35Q8N283 1001 aa10.78□□□□□ -0.68
PALB2-201ENST00000261584 HSPH1Q92598 858 aa10.78□□□□□ -0.68
PALB2-201ENST00000261584 FAM161BQ96MY7 647 aa10.78□□□□□ -0.68
PALB2-201ENST00000261584 ADAM22Q9P0K1 906 aa10.78□□□□□ -0.68
PALB2-201ENST00000261584 SEPT9Q9UHD8 586 aaPredicted RBP10.78□□□□□ -0.68
PALB2-201ENST00000261584 ZFP69BQ9UJL9 534 aa10.78□□□□□ -0.68
PALB2-201ENST00000261584 MST1RQ04912 1400 aa10.78□□□□□ -0.68
PALB2-201ENST00000261584 SYNGAP1Q96PV0 1343 aa10.78□□□□□ -0.68
PALB2-201ENST00000261584 NDUFB10O96000 172 aa10.78□□□□□ -0.68
PALB2-201ENST00000261584 KRT16P08779 473 aa10.78□□□□□ -0.68
PALB2-201ENST00000261584 RARAP10276 462 aa10.78□□□□□ -0.68
PALB2-201ENST00000261584 ESRRAP11474 423 aaPredicted RBP10.78□□□□□ -0.68
PALB2-201ENST00000261584 CHKAP35790 457 aa10.78□□□□□ -0.68
PALB2-201ENST00000261584 STRN3Q13033 797 aa10.78□□□□□ -0.68
PALB2-201ENST00000261584 DRP2Q13474 957 aa10.78□□□□□ -0.68
PALB2-201ENST00000261584 ATP13A4Q4VNC1 1196 aa10.78□□□□□ -0.68
PALB2-201ENST00000261584 IL31Q6EBC2 164 aa10.78□□□□□ -0.68
PALB2-201ENST00000261584 IRF2BP2Q7Z5L9 587 aa10.78□□□□□ -0.68
PALB2-201ENST00000261584 FRMD5Q7Z6J6 570 aa10.78□□□□□ -0.68
PALB2-201ENST00000261584 DCLK2Q8N568 766 aa10.78□□□□□ -0.68
PALB2-201ENST00000261584 PIK3R5Q8WYR1 880 aa10.78□□□□□ -0.68
PALB2-201ENST00000261584 TATDN2Q93075 761 aa10.78□□□□□ -0.68
PALB2-201ENST00000261584 TRIM4Q9C037 500 aa10.78□□□□□ -0.68
PALB2-201ENST00000261584 FIS1Q9Y3D6 152 aa10.78□□□□□ -0.68
PALB2-201ENST00000261584 CCDC78A2IDD5 438 aa10.77□□□□□ -0.68
PALB2-201ENST00000261584 SHOX2O60902 331 aaPredicted RBP10.77□□□□□ -0.68
PALB2-201ENST00000261584 PHF2O75151 1096 aa10.77□□□□□ -0.68
PALB2-201ENST00000261584 TRPA1O75762 1119 aa10.77□□□□□ -0.68
PALB2-201ENST00000261584 DRD4P21917 467 aa10.77□□□□□ -0.68
PALB2-201ENST00000261584 CHRNA3P32297 505 aa10.77□□□□□ -0.68
PALB2-201ENST00000261584 GCLCP48506 637 aaPredicted RBP10.77□□□□□ -0.68
PALB2-201ENST00000261584 ARSEP51690 589 aa10.77□□□□□ -0.68
PALB2-201ENST00000261584 C16orf86Q6ZW13 317 aa10.77□□□□□ -0.68
PALB2-201ENST00000261584 RAB3IPQ96QF0 476 aaPredicted RBP10.77□□□□□ -0.68
PALB2-201ENST00000261584 NACC1Q96RE7 527 aa10.77□□□□□ -0.68
PALB2-201ENST00000261584 DDX50Q9BQ39 737 aaKnown RBP10.77□□□□□ -0.68
PALB2-201ENST00000261584 STK33Q9BYT3 514 aa10.77□□□□□ -0.68
PALB2-201ENST00000261584 KMT5AQ9NQR1 393 aa10.77□□□□□ -0.68
PALB2-201ENST00000261584 PCDHGC5Q9Y5F6 944 aa10.77□□□□□ -0.68
PALB2-201ENST00000261584 DENND3A2RUS2 1198 aa10.77□□□□□ -0.69
PALB2-201ENST00000261584 H7C0C1 242 aa10.77□□□□□ -0.69
PALB2-201ENST00000261584 IPO5O00410 1097 aaKnown RBP10.77□□□□□ -0.69
PALB2-201ENST00000261584 PDXKO00764 312 aa10.77□□□□□ -0.69
PALB2-201ENST00000261584 CLGNO14967 610 aa10.77□□□□□ -0.69
PALB2-201ENST00000261584 ENTPD5O75356 428 aa10.77□□□□□ -0.69
PALB2-201ENST00000261584 TOM1L1O75674 476 aa10.77□□□□□ -0.69
PALB2-201ENST00000261584 EPHB2P29323 1055 aa10.77□□□□□ -0.69
PALB2-201ENST00000261584 ATP5OP48047 213 aa10.77□□□□□ -0.69
PALB2-201ENST00000261584 RHOT2Q8IXI1 618 aa10.77□□□□□ -0.69
PALB2-201ENST00000261584 PYROXD1Q8WU10 500 aa10.77□□□□□ -0.69
PALB2-201ENST00000261584 TBC1D22AQ8WUA7 517 aa10.77□□□□□ -0.69
PALB2-201ENST00000261584 TRABDQ9H4I3 376 aa10.77□□□□□ -0.69
PALB2-201ENST00000261584 SUCLA2Q9P2R7 463 aaPredicted RBP10.77□□□□□ -0.69
PALB2-201ENST00000261584 C2orf71A6NGG8 1288 aa10.77□□□□□ -0.69
PALB2-201ENST00000261584 PODXLO00592 558 aa10.77□□□□□ -0.69
PALB2-201ENST00000261584 PPP1R11O60927 126 aaPredicted RBP10.77□□□□□ -0.69
PALB2-201ENST00000261584 PPFIA2O75334 1257 aa10.77□□□□□ -0.69
PALB2-201ENST00000261584 ARP10275 920 aa10.77□□□□□ -0.69
PALB2-201ENST00000261584 ATP2B4P23634 1241 aa10.77□□□□□ -0.69
PALB2-201ENST00000261584 COILP38432 576 aaPredicted RBP10.77□□□□□ -0.69
PALB2-201ENST00000261584 TFAMQ00059 246 aaKnown RBP10.77□□□□□ -0.69
PALB2-201ENST00000261584 SF3B3Q15393 1217 aaKnown RBP10.77□□□□□ -0.69
PALB2-201ENST00000261584 BRDTQ58F21 947 aaPredicted RBP10.77□□□□□ -0.69
PALB2-201ENST00000261584 TMEM154Q6P9G4 183 aa10.77□□□□□ -0.69
PALB2-201ENST00000261584 LRIG3Q6UXM1 1119 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms