RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 KLHL14Q9P2G3 628 aa17.06■□□□□ 0.32
LMNB1-201ENST00000261366 DIS3Q9Y2L1 958 aaKnown RBP17.06■□□□□ 0.32
LMNB1-201ENST00000261366 PCDHA3Q9Y5H8 950 aa17.06■□□□□ 0.32
LMNB1-201ENST00000261366 CETPP11597 493 aa17.05■□□□□ 0.32
LMNB1-201ENST00000261366 HOXA7P31268 230 aaPredicted RBP17.05■□□□□ 0.32
LMNB1-201ENST00000261366 ODR4Q5SWX8 454 aa17.05■□□□□ 0.32
LMNB1-201ENST00000261366 VSIG1Q86XK7 387 aa17.05■□□□□ 0.32
LMNB1-201ENST00000261366 SLC13A5Q86YT5 568 aaPredicted RBP17.05■□□□□ 0.32
LMNB1-201ENST00000261366 FAM178BQ8IXR5 827 aa17.05■□□□□ 0.32
LMNB1-201ENST00000261366 ZSWIM2Q8NEG5 633 aa17.05■□□□□ 0.32
LMNB1-201ENST00000261366 TBC1D16Q8TBP0 767 aa17.05■□□□□ 0.32
LMNB1-201ENST00000261366 CCHCR1Q8TD31 782 aa17.05■□□□□ 0.32
LMNB1-201ENST00000261366 ZBTB10Q96DT7 871 aa17.05■□□□□ 0.32
LMNB1-201ENST00000261366 IFT74Q96LB3 600 aa17.05■□□□□ 0.32
LMNB1-201ENST00000261366 PCDHB18PQ96TA0 734 aa17.05■□□□□ 0.32
LMNB1-201ENST00000261366 AAASQ9NRG9 546 aa17.05■□□□□ 0.32
LMNB1-201ENST00000261366 PARP2Q9UGN5 583 aa17.05■□□□□ 0.32
LMNB1-201ENST00000261366 MTUS1Q9ULD2 1270 aa17.05■□□□□ 0.32
LMNB1-201ENST00000261366 GYS1P13807 737 aa17.05■□□□□ 0.32
LMNB1-201ENST00000261366 CHRNB2P17787 502 aa17.05■□□□□ 0.32
LMNB1-201ENST00000261366 GALNTL6Q49A17 601 aa17.05■□□□□ 0.32
LMNB1-201ENST00000261366 SPDYCQ5MJ68 293 aa17.05■□□□□ 0.32
LMNB1-201ENST00000261366 CGB2Q6NT52 195 aa17.05■□□□□ 0.32
LMNB1-201ENST00000261366 CYP4F22Q6NT55 531 aa17.05■□□□□ 0.32
LMNB1-201ENST00000261366 PPP1R18Q6NYC8 613 aa17.05■□□□□ 0.32
LMNB1-201ENST00000261366 ART4Q93070 314 aa17.05■□□□□ 0.32
LMNB1-201ENST00000261366 DYDC2Q96IM9 177 aa17.05■□□□□ 0.32
LMNB1-201ENST00000261366 SYT11Q9BT88 431 aa17.05■□□□□ 0.32
LMNB1-201ENST00000261366 CHST7Q9NS84 486 aa17.05■□□□□ 0.32
LMNB1-201ENST00000261366 PKD2L1Q9P0L9 805 aa17.05■□□□□ 0.32
LMNB1-201ENST00000261366 PCYOX1Q9UHG3 505 aa17.05■□□□□ 0.32
LMNB1-201ENST00000261366 EMSYQ7Z589 1322 aa17.04■□□□□ 0.32
LMNB1-201ENST00000261366 OAS1P00973 400 aaKnown RBP17.04■□□□□ 0.32
LMNB1-201ENST00000261366 SERPINB2P05120 415 aa17.04■□□□□ 0.32
LMNB1-201ENST00000261366 CTNNA2P26232 953 aa17.04■□□□□ 0.32
LMNB1-201ENST00000261366 ANXA13P27216 316 aa17.04■□□□□ 0.32
LMNB1-201ENST00000261366 ABL2P42684 1182 aa17.04■□□□□ 0.32
LMNB1-201ENST00000261366 DRG2P55039 364 aaKnown RBP17.04■□□□□ 0.32
LMNB1-201ENST00000261366 GPC5P78333 572 aa17.04■□□□□ 0.32
LMNB1-201ENST00000261366 SGO2Q562F6 1265 aa17.04■□□□□ 0.32
LMNB1-201ENST00000261366 ECHDC2Q86YB7 292 aa17.04■□□□□ 0.32
LMNB1-201ENST00000261366 RHOT2Q8IXI1 618 aa17.04■□□□□ 0.32
LMNB1-201ENST00000261366 NUP85Q9BW27 656 aa17.04■□□□□ 0.32
LMNB1-201ENST00000261366 HEMGNQ9BXL5 484 aa17.04■□□□□ 0.32
LMNB1-201ENST00000261366 HAO1Q9UJM8 370 aa17.04■□□□□ 0.32
LMNB1-201ENST00000261366 GSTTP1A0A1W2PQM5 241 aa17.04■□□□□ 0.32
LMNB1-201ENST00000261366 GJC1P36383 396 aa17.04■□□□□ 0.32
LMNB1-201ENST00000261366 ERP27Q96DN0 273 aa17.04■□□□□ 0.32
LMNB1-201ENST00000261366 CCDC134Q9H6E4 229 aa17.04■□□□□ 0.32
LMNB1-201ENST00000261366 AGPAT3Q9NRZ7 376 aa17.04■□□□□ 0.32
LMNB1-201ENST00000261366 PEX5P50542 639 aa17.03■□□□□ 0.32
LMNB1-201ENST00000261366 ZNF131P52739 623 aa17.03■□□□□ 0.32
LMNB1-201ENST00000261366 SESN3P58005 492 aa17.03■□□□□ 0.32
LMNB1-201ENST00000261366 DNAJC3Q13217 504 aa17.03■□□□□ 0.32
LMNB1-201ENST00000261366 TMED2Q15363 201 aa17.03■□□□□ 0.32
LMNB1-201ENST00000261366 EPC2Q52LR7 807 aa17.03■□□□□ 0.32
LMNB1-201ENST00000261366 MIGA2Q7L4E1 593 aa17.03■□□□□ 0.32
LMNB1-201ENST00000261366 ANKLE1Q8NAG6 615 aa17.03■□□□□ 0.32
LMNB1-201ENST00000261366 LENG9Q96B70 501 aa17.03■□□□□ 0.32
LMNB1-201ENST00000261366 PITPNM3Q9BZ71 974 aa17.03■□□□□ 0.32
LMNB1-201ENST00000261366 ARHGEF3Q9NR81 526 aa17.03■□□□□ 0.32
LMNB1-201ENST00000261366 ZNF831Q5JPB2 1677 aa17.03■□□□□ 0.32
LMNB1-201ENST00000261366 GTPBP10A4D1E9 387 aaKnown RBP17.03■□□□□ 0.32
LMNB1-201ENST00000261366 DDX39AO00148 427 aaKnown RBP17.03■□□□□ 0.32
LMNB1-201ENST00000261366 CYP26A1O43174 497 aa17.03■□□□□ 0.32
LMNB1-201ENST00000261366 NT5C2P49902 561 aa17.03■□□□□ 0.32
LMNB1-201ENST00000261366 ITGA8P53708 1063 aa17.03■□□□□ 0.32
LMNB1-201ENST00000261366 GPATCH4Q5T3I0 446 aaKnown RBP17.03■□□□□ 0.32
LMNB1-201ENST00000261366 BTNL9Q6UXG8 535 aa17.03■□□□□ 0.32
LMNB1-201ENST00000261366 INTS8Q75QN2 995 aaKnown RBP17.03■□□□□ 0.32
LMNB1-201ENST00000261366 PPM1KQ8N3J5 372 aa17.03■□□□□ 0.32
LMNB1-201ENST00000261366 ARMC2Q8NEN0 867 aa17.03■□□□□ 0.32
LMNB1-201ENST00000261366 ZNF564Q8TBZ8 553 aaPredicted RBP17.03■□□□□ 0.32
LMNB1-201ENST00000261366 PARD3BQ8TEW8 1205 aa17.03■□□□□ 0.32
LMNB1-201ENST00000261366 ZNF622Q969S3 477 aaKnown RBP eCLIP17.03■□□□□ 0.325e-7■□□□□ 8.2
LMNB1-201ENST00000261366 ZNF653Q96CK0 615 aa17.03■□□□□ 0.32
LMNB1-201ENST00000261366 TRIM7Q9C029 511 aa17.03■□□□□ 0.32
LMNB1-201ENST00000261366 PARVGQ9HBI0 331 aa17.03■□□□□ 0.32
LMNB1-201ENST00000261366 RXFP1Q9HBX9 757 aa17.03■□□□□ 0.32
LMNB1-201ENST00000261366 SLCO1B3Q9NPD5 702 aa17.03■□□□□ 0.32
LMNB1-201ENST00000261366 MIF4GDA9UHW6 222 aaKnown RBP17.03■□□□□ 0.32
LMNB1-201ENST00000261366 SHMT1P34896 483 aa17.03■□□□□ 0.32
LMNB1-201ENST00000261366 ADCY8P40145 1251 aa17.03■□□□□ 0.32
LMNB1-201ENST00000261366 THEMIS2Q5TEJ8 643 aa17.03■□□□□ 0.32
LMNB1-201ENST00000261366 SLC47A2Q86VL8 602 aa17.03■□□□□ 0.32
LMNB1-201ENST00000261366 ZFPM1Q8IX07 1006 aa17.03■□□□□ 0.32
LMNB1-201ENST00000261366 SPIRE2Q8WWL2 714 aa17.03■□□□□ 0.32
LMNB1-201ENST00000261366 UTP4Q969X6 686 aaKnown RBP17.03■□□□□ 0.32
LMNB1-201ENST00000261366 RUNDC3BQ96NL0 473 aa17.03■□□□□ 0.32
LMNB1-201ENST00000261366 OSBPL1AQ9BXW6 950 aa17.03■□□□□ 0.32
LMNB1-201ENST00000261366 MYLK2Q9H1R3 596 aa17.03■□□□□ 0.32
LMNB1-201ENST00000261366 QTRT2Q9H974 415 aaKnown RBP17.03■□□□□ 0.32
LMNB1-201ENST00000261366 NKIRAS1Q9NYS0 192 aa17.03■□□□□ 0.32
LMNB1-201ENST00000261366 A0A1W2PRG0 241 aa17.02■□□□□ 0.32
LMNB1-201ENST00000261366 GOLGA8IPA6NC78 632 aa17.02■□□□□ 0.32
LMNB1-201ENST00000261366 GOLGA8JA6NMD2 632 aa17.02■□□□□ 0.32
LMNB1-201ENST00000261366 ALADP13716 330 aa17.02■□□□□ 0.32
LMNB1-201ENST00000261366 FOXN2P32314 431 aa17.02■□□□□ 0.32
LMNB1-201ENST00000261366 LLGL2Q6P1M3 1020 aa17.02■□□□□ 0.32
LMNB1-201ENST00000261366 TBC1D22AQ8WUA7 517 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms