RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 NOLC1Q14978 699 aaKnown RBP eCLIP17.26■□□□□ 0.35
CCDC90B-201ENST00000260054 SPATA1Q5VX52 437 aa17.26■□□□□ 0.35
CCDC90B-201ENST00000260054 LUZP1Q86V48 1076 aa17.26■□□□□ 0.35
CCDC90B-201ENST00000260054 SLC9A9Q8IVB4 645 aa17.26■□□□□ 0.35
CCDC90B-201ENST00000260054 DPF3Q92784 378 aa17.26■□□□□ 0.35
CCDC90B-201ENST00000260054 SAAL1Q96ER3 474 aa17.26■□□□□ 0.35
CCDC90B-201ENST00000260054 MSTO1Q9BUK6 570 aa17.26■□□□□ 0.35
CCDC90B-201ENST00000260054 NFE2L3Q9Y4A8 694 aa17.26■□□□□ 0.35
CCDC90B-201ENST00000260054 IKBKBO14920 756 aa17.26■□□□□ 0.35
CCDC90B-201ENST00000260054 FAM189A1O60320 539 aa17.26■□□□□ 0.35
CCDC90B-201ENST00000260054 NPTXRO95502 500 aa17.26■□□□□ 0.35
CCDC90B-201ENST00000260054 SYN1P17600 705 aa17.26■□□□□ 0.35
CCDC90B-201ENST00000260054 SEZ6Q53EL9 994 aa17.26■□□□□ 0.35
CCDC90B-201ENST00000260054 TWF2Q6IBS0 349 aaKnown RBP17.26■□□□□ 0.35
CCDC90B-201ENST00000260054 TMEM199Q8N511 208 aa17.26■□□□□ 0.35
CCDC90B-201ENST00000260054 CEP120Q8N960 986 aa17.26■□□□□ 0.35
CCDC90B-201ENST00000260054 LINC01599Q8WXQ3 324 aa17.26■□□□□ 0.35
CCDC90B-201ENST00000260054 SEPT8Q92599 483 aa17.26■□□□□ 0.35
CCDC90B-201ENST00000260054 CCDC51Q96ER9 411 aa17.26■□□□□ 0.35
CCDC90B-201ENST00000260054 ADPGKQ9BRR6 497 aa17.26■□□□□ 0.35
CCDC90B-201ENST00000260054 SRRTQ9BXP5 876 aaKnown RBP17.26■□□□□ 0.35
CCDC90B-201ENST00000260054 AGO2Q9UKV8 859 aaKnown RBP17.26■□□□□ 0.35
CCDC90B-201ENST00000260054 ZMYND8Q9ULU4 1186 aaPredicted RBP17.26■□□□□ 0.35
CCDC90B-201ENST00000260054 GOLGA8IPA6NC78 632 aa17.25■□□□□ 0.35
CCDC90B-201ENST00000260054 GOLGA8JA6NMD2 632 aa17.25■□□□□ 0.35
CCDC90B-201ENST00000260054 MCF2P10911 925 aa17.25■□□□□ 0.35
CCDC90B-201ENST00000260054 ZSCAN20P17040 1043 aaPredicted RBP17.25■□□□□ 0.35
CCDC90B-201ENST00000260054 RPL13P26373 211 aaKnown RBP17.25■□□□□ 0.35
CCDC90B-201ENST00000260054 CASP4P49662 377 aa17.25■□□□□ 0.35
CCDC90B-201ENST00000260054 MYBPC2Q14324 1141 aa17.25■□□□□ 0.35
CCDC90B-201ENST00000260054 ZBTB41Q5SVQ8 909 aa17.25■□□□□ 0.35
CCDC90B-201ENST00000260054 RTN4RL1Q86UN2 441 aaPredicted RBP17.25■□□□□ 0.35
CCDC90B-201ENST00000260054 XXYLT1Q8NBI6 393 aa17.25■□□□□ 0.35
CCDC90B-201ENST00000260054 RNF214Q8ND24 703 aa17.25■□□□□ 0.35
CCDC90B-201ENST00000260054 BADQ92934 168 aa17.25■□□□□ 0.35
CCDC90B-201ENST00000260054 ADAM2Q99965 735 aa17.25■□□□□ 0.35
CCDC90B-201ENST00000260054 SAMSN1Q9NSI8 373 aaKnown RBP17.25■□□□□ 0.35
CCDC90B-201ENST00000260054 CETN3O15182 167 aa17.24■□□□□ 0.35
CCDC90B-201ENST00000260054 OGTO15294 1046 aa17.24■□□□□ 0.35
CCDC90B-201ENST00000260054 EXOC3O60645 756 aa17.24■□□□□ 0.35
CCDC90B-201ENST00000260054 AKAP3O75969 853 aa17.24■□□□□ 0.35
CCDC90B-201ENST00000260054 TPD52L1Q16890 204 aaPredicted RBP17.24■□□□□ 0.35
CCDC90B-201ENST00000260054 DCAF4L1Q3SXM0 396 aa17.24■□□□□ 0.35
CCDC90B-201ENST00000260054 CEP135Q66GS9 1140 aa17.24■□□□□ 0.35
CCDC90B-201ENST00000260054 IRF2BP1Q8IU81 584 aa17.24■□□□□ 0.35
CCDC90B-201ENST00000260054 THNSL1Q8IYQ7 743 aa17.24■□□□□ 0.35
CCDC90B-201ENST00000260054 NOC3LQ8WTT2 800 aaKnown RBP17.24■□□□□ 0.35
CCDC90B-201ENST00000260054 APBB2Q92870 758 aa17.24■□□□□ 0.35
CCDC90B-201ENST00000260054 FBXL18Q96ME1 805 aa17.24■□□□□ 0.35
CCDC90B-201ENST00000260054 FAM213AQ9BRX8 229 aa17.24■□□□□ 0.35
CCDC90B-201ENST00000260054 FTHL17Q9BXU8 183 aa17.24■□□□□ 0.35
CCDC90B-201ENST00000260054 RBSNQ9H1K0 784 aa17.24■□□□□ 0.35
CCDC90B-201ENST00000260054 HSD3B7Q9H2F3 369 aa17.24■□□□□ 0.35
CCDC90B-201ENST00000260054 FANCLQ9NW38 375 aa17.24■□□□□ 0.35
CCDC90B-201ENST00000260054 BECN2A8MW95 431 aa17.23■□□□□ 0.35
CCDC90B-201ENST00000260054 KIAA0391O15091 583 aaKnown RBP17.23■□□□□ 0.35
CCDC90B-201ENST00000260054 EXTL3O43909 919 aa17.23■□□□□ 0.35
CCDC90B-201ENST00000260054 TNFSF9P41273 254 aa17.23■□□□□ 0.35
CCDC90B-201ENST00000260054 ACOT2P49753 483 aa17.23■□□□□ 0.35
CCDC90B-201ENST00000260054 OSTNP61366 133 aa17.23■□□□□ 0.35
CCDC90B-201ENST00000260054 HSP90AA4PQ58FG1 418 aa17.23■□□□□ 0.35
CCDC90B-201ENST00000260054 CRELD2Q6UXH1 353 aaPredicted RBP17.23■□□□□ 0.35
CCDC90B-201ENST00000260054 CBWD2Q8IUF1 395 aa17.23■□□□□ 0.35
CCDC90B-201ENST00000260054 TMEM192Q8IY95 271 aa17.23■□□□□ 0.35
CCDC90B-201ENST00000260054 GPD1LQ8N335 351 aa17.23■□□□□ 0.35
CCDC90B-201ENST00000260054 RDH13Q8NBN7 331 aa17.23■□□□□ 0.35
CCDC90B-201ENST00000260054 CEP63Q96MT8 703 aa17.23■□□□□ 0.35
CCDC90B-201ENST00000260054 TRAIPQ9BWF2 469 aa17.23■□□□□ 0.35
CCDC90B-201ENST00000260054 TRIM6Q9C030 488 aaPredicted RBP17.23■□□□□ 0.35
CCDC90B-201ENST00000260054 NXF3Q9H4D5 531 aaKnown RBP17.23■□□□□ 0.35
CCDC90B-201ENST00000260054 RGS18Q9NS28 235 aa17.23■□□□□ 0.35
CCDC90B-201ENST00000260054 FAM105AQ9NUU6 356 aa17.23■□□□□ 0.35
CCDC90B-201ENST00000260054 HES2Q9Y543 173 aa17.23■□□□□ 0.35
CCDC90B-201ENST00000260054 LTBP2Q14767 1821 aa17.23■□□□□ 0.35
CCDC90B-201ENST00000260054 SMTNL1A8MU46 457 aa17.23■□□□□ 0.35
CCDC90B-201ENST00000260054 CNKSR3Q6P9H4 555 aa17.23■□□□□ 0.35
CCDC90B-201ENST00000260054 FILIP1Q7Z7B0 1213 aa17.23■□□□□ 0.35
CCDC90B-201ENST00000260054 SMG8Q8ND04 991 aaKnown RBP17.23■□□□□ 0.35
CCDC90B-201ENST00000260054 TSPYL2Q9H2G4 693 aaPredicted RBP17.23■□□□□ 0.35
CCDC90B-201ENST00000260054 THAP9Q9H5L6 903 aa17.23■□□□□ 0.35
CCDC90B-201ENST00000260054 CPSF3Q9UKF6 684 aaKnown RBP17.23■□□□□ 0.35
CCDC90B-201ENST00000260054 IPPQ9Y573 584 aa17.23■□□□□ 0.35
CCDC90B-201ENST00000260054 PCDHB2Q9Y5E7 798 aa17.23■□□□□ 0.35
CCDC90B-201ENST00000260054 LDHAP00338 332 aaKnown RBP17.22■□□□□ 0.35
CCDC90B-201ENST00000260054 ADRB2P07550 413 aa17.22■□□□□ 0.35
CCDC90B-201ENST00000260054 ACRP10323 421 aa17.22■□□□□ 0.35
CCDC90B-201ENST00000260054 GRM5P41594 1212 aa17.22■□□□□ 0.35
CCDC90B-201ENST00000260054 SNRNP35Q16560 246 aaKnown RBP17.22■□□□□ 0.35
CCDC90B-201ENST00000260054 CDKAL1Q5VV42 579 aa17.22■□□□□ 0.35
CCDC90B-201ENST00000260054 APBB1IPQ7Z5R6 666 aaPredicted RBP17.22■□□□□ 0.35
CCDC90B-201ENST00000260054 IL23AQ9NPF7 189 aa17.22■□□□□ 0.35
CCDC90B-201ENST00000260054 FRMD4BQ9Y2L6 1034 aa17.22■□□□□ 0.35
CCDC90B-201ENST00000260054 A0A0U1RQF3 1178 aa17.21■□□□□ 0.35
CCDC90B-201ENST00000260054 C9IYK1 514 aa17.21■□□□□ 0.35
CCDC90B-201ENST00000260054 ENPP3O14638 875 aa17.21■□□□□ 0.35
CCDC90B-201ENST00000260054 SLC16A3O15427 465 aaKnown RBP17.21■□□□□ 0.35
CCDC90B-201ENST00000260054 MEFVO15553 781 aaPredicted RBP17.21■□□□□ 0.35
CCDC90B-201ENST00000260054 FGFR1OPO95684 399 aaKnown RBP17.21■□□□□ 0.35
CCDC90B-201ENST00000260054 STAG3L1P0CL83 205 aa17.21■□□□□ 0.35
CCDC90B-201ENST00000260054 ZNF18P17022 549 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms