RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 H0YGN5 161 aa13.15□□□□□ -0.3
USP30-201ENST00000257548 ZBED4O75132 1171 aa13.15□□□□□ -0.3
USP30-201ENST00000257548 UFL1O94874 794 aa13.15□□□□□ -0.3
USP30-201ENST00000257548 CYP11B2P19099 503 aa13.15□□□□□ -0.3
USP30-201ENST00000257548 COILP38432 576 aaPredicted RBP13.15□□□□□ -0.3
USP30-201ENST00000257548 C1orf146Q5VVC0 180 aa13.15□□□□□ -0.3
USP30-201ENST00000257548 IZUMO3Q5VZ72 239 aa13.15□□□□□ -0.3
USP30-201ENST00000257548 RBM46Q8TBY0 533 aaKnown RBP13.15□□□□□ -0.3
USP30-201ENST00000257548 SPZ1Q9BXG8 430 aa13.15□□□□□ -0.3
USP30-201ENST00000257548 CORO1CQ9ULV4 474 aaPredicted RBP13.15□□□□□ -0.3
USP30-201ENST00000257548 NFS1Q9Y697 457 aa13.15□□□□□ -0.3
USP30-201ENST00000257548 RFC4P35249 363 aa13.14□□□□□ -0.31
USP30-201ENST00000257548 CACNA2D1P54289 1103 aa13.14□□□□□ -0.31
USP30-201ENST00000257548 BTKQ06187 659 aa13.14□□□□□ -0.31
USP30-201ENST00000257548 ECM1Q16610 540 aa13.14□□□□□ -0.31
USP30-201ENST00000257548 DAB2IPQ5VWQ8 1189 aa13.14□□□□□ -0.31
USP30-201ENST00000257548 IRF2BP2Q7Z5L9 587 aa13.14□□□□□ -0.31
USP30-201ENST00000257548 INTS2Q9H0H0 1204 aaKnown RBP13.14□□□□□ -0.31
USP30-201ENST00000257548 ANAPC4Q9UJX5 808 aa13.14□□□□□ -0.31
USP30-201ENST00000257548 MIF4GDA9UHW6 222 aaKnown RBP13.14□□□□□ -0.31
USP30-201ENST00000257548 ENO1P06733 434 aaKnown RBP13.14□□□□□ -0.31
USP30-201ENST00000257548 CD58P19256 250 aa13.14□□□□□ -0.31
USP30-201ENST00000257548 PGM1P36871 562 aa13.14□□□□□ -0.31
USP30-201ENST00000257548 COG2Q14746 738 aa13.14□□□□□ -0.31
USP30-201ENST00000257548 DCUN1D2Q6PH85 259 aa13.14□□□□□ -0.31
USP30-201ENST00000257548 C3orf67Q6ZVT6 689 aa13.14□□□□□ -0.31
USP30-201ENST00000257548 SDCCAG8Q86SQ7 713 aaPredicted RBP13.14□□□□□ -0.31
USP30-201ENST00000257548 TXNRD3Q86VQ6 643 aa13.14□□□□□ -0.31
USP30-201ENST00000257548 PALB2Q86YC2 1186 aa13.14□□□□□ -0.31
USP30-201ENST00000257548 AGGF1Q8N302 714 aaeCLIP13.14□□□□□ -0.311e-9■□□□□ 8
USP30-201ENST00000257548 WDR66Q8TBY9 1149 aa13.14□□□□□ -0.31
USP30-201ENST00000257548 STK32AQ8WU08 396 aa13.14□□□□□ -0.31
USP30-201ENST00000257548 PFASO15067 1338 aa13.14□□□□□ -0.31
USP30-201ENST00000257548 MYH13Q9UKX3 1938 aa13.14□□□□□ -0.31
USP30-201ENST00000257548 HSPA6P17066 643 aa13.14□□□□□ -0.31
USP30-201ENST00000257548 TAL1P17542 331 aaPredicted RBP13.14□□□□□ -0.31
USP30-201ENST00000257548 GINM1Q9NU53 330 aa13.14□□□□□ -0.31
USP30-201ENST00000257548 ARMCX1Q9P291 453 aa13.14□□□□□ -0.31
USP30-201ENST00000257548 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.13□□□□□ -0.31
USP30-201ENST00000257548 PYGLP06737 847 aa13.13□□□□□ -0.31
USP30-201ENST00000257548 IL6STP40189 918 aaPredicted RBP13.13□□□□□ -0.31
USP30-201ENST00000257548 ZNF268Q14587 947 aaPredicted RBP13.13□□□□□ -0.31
USP30-201ENST00000257548 ASTE1Q2TB18 679 aaPredicted RBP13.13□□□□□ -0.31
USP30-201ENST00000257548 LVRNQ6Q4G3 990 aa13.13□□□□□ -0.31
USP30-201ENST00000257548 CCNJLQ8IV13 435 aa13.13□□□□□ -0.31
USP30-201ENST00000257548 UCMAQ8WVF2 138 aa13.13□□□□□ -0.31
USP30-201ENST00000257548 ZNF317Q96PQ6 595 aaPredicted RBP13.13□□□□□ -0.31
USP30-201ENST00000257548 AGPAT1Q99943 283 aa13.13□□□□□ -0.31
USP30-201ENST00000257548 THTPAQ9BU02 230 aa13.13□□□□□ -0.31
USP30-201ENST00000257548 TRIM55Q9BYV6 548 aa13.13□□□□□ -0.31
USP30-201ENST00000257548 BCAS3Q9H6U6 928 aa13.13□□□□□ -0.31
USP30-201ENST00000257548 I3L4J1 428 aa13.13□□□□□ -0.31
USP30-201ENST00000257548 SORBS3O60504 671 aa13.13□□□□□ -0.31
USP30-201ENST00000257548 GAS7O60861 476 aa13.13□□□□□ -0.31
USP30-201ENST00000257548 UNC5CO95185 931 aa13.13□□□□□ -0.31
USP30-201ENST00000257548 HLA-DOAP06340 250 aa13.13□□□□□ -0.31
USP30-201ENST00000257548 ARFIP2P53365 341 aa13.13□□□□□ -0.31
USP30-201ENST00000257548 YWHAGP61981 247 aaKnown RBP eCLIP13.13□□□□□ -0.31
USP30-201ENST00000257548 NOP14P78316 857 aaKnown RBP13.13□□□□□ -0.31
USP30-201ENST00000257548 BLMHQ13867 455 aa13.13□□□□□ -0.31
USP30-201ENST00000257548 TMCO4Q5TGY1 634 aa13.13□□□□□ -0.31
USP30-201ENST00000257548 NLRP9Q7RTR0 991 aa13.13□□□□□ -0.31
USP30-201ENST00000257548 ZNF804AQ7Z570 1209 aa13.13□□□□□ -0.31
USP30-201ENST00000257548 CCDC125Q86Z20 511 aa13.13□□□□□ -0.31
USP30-201ENST00000257548 CCDC89Q8N998 374 aa13.13□□□□□ -0.31
USP30-201ENST00000257548 SCG3Q8WXD2 468 aaKnown RBP13.13□□□□□ -0.31
USP30-201ENST00000257548 SLC5A5Q92911 643 aa13.13□□□□□ -0.31
USP30-201ENST00000257548 NMD3Q96D46 503 aaKnown RBP13.13□□□□□ -0.31
USP30-201ENST00000257548 AFF2P51816 1311 aa13.13□□□□□ -0.31
USP30-201ENST00000257548 EMSYQ7Z589 1322 aa13.13□□□□□ -0.31
USP30-201ENST00000257548 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.13□□□□□ -0.31
USP30-201ENST00000257548 H3BRJ5 948 aa13.13□□□□□ -0.31
USP30-201ENST00000257548 MED24O75448 989 aa13.13□□□□□ -0.31
USP30-201ENST00000257548 SMNDC1O75940 238 aaKnown RBP eCLIP13.13□□□□□ -0.31
USP30-201ENST00000257548 CALCAP01258 141 aa13.13□□□□□ -0.31
USP30-201ENST00000257548 PEX5P50542 639 aa13.13□□□□□ -0.31
USP30-201ENST00000257548 GPS1Q13098 491 aa13.13□□□□□ -0.31
USP30-201ENST00000257548 KIF22Q14807 665 aa13.13□□□□□ -0.31
USP30-201ENST00000257548 CLUL1Q15846 466 aa13.13□□□□□ -0.31
USP30-201ENST00000257548 FRMD5Q7Z6J6 570 aa13.13□□□□□ -0.31
USP30-201ENST00000257548 PRELID2Q8N945 189 aa13.13□□□□□ -0.31
USP30-201ENST00000257548 RUSC1Q9BVN2 902 aa13.13□□□□□ -0.31
USP30-201ENST00000257548 HEY2Q9UBP5 337 aa13.13□□□□□ -0.31
USP30-201ENST00000257548 ZNF711Q9Y462 761 aa13.13□□□□□ -0.31
USP30-201ENST00000257548 FLT1P17948 1338 aa13.13□□□□□ -0.31
USP30-201ENST00000257548 ANKRD63C9JTQ0 380 aa13.12□□□□□ -0.31
USP30-201ENST00000257548 KRT36O76013 467 aa13.12□□□□□ -0.31
USP30-201ENST00000257548 TTLL1O95922 423 aa13.12□□□□□ -0.31
USP30-201ENST00000257548 CHKAP35790 457 aa13.12□□□□□ -0.31
USP30-201ENST00000257548 FMO5P49326 533 aa13.12□□□□□ -0.31
USP30-201ENST00000257548 ATXN3P54252 364 aaPredicted RBP13.12□□□□□ -0.31
USP30-201ENST00000257548 GTF2IP78347 998 aa13.12□□□□□ -0.31
USP30-201ENST00000257548 BFSP1Q12934 665 aa13.12□□□□□ -0.31
USP30-201ENST00000257548 DBN1Q16643 649 aa13.12□□□□□ -0.31
USP30-201ENST00000257548 DUPD1Q68J44 220 aa13.12□□□□□ -0.31
USP30-201ENST00000257548 TPTE2Q6XPS3 522 aa13.12□□□□□ -0.31
USP30-201ENST00000257548 CPNE8Q86YQ8 564 aa13.12□□□□□ -0.31
USP30-201ENST00000257548 SLC13A5Q86YT5 568 aaPredicted RBP13.12□□□□□ -0.31
USP30-201ENST00000257548 SLC26A7Q8TE54 656 aa13.12□□□□□ -0.31
USP30-201ENST00000257548 GRK7Q8WTQ7 553 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms