RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 USP17L22D6RA61 530 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 USP17L17D6RBQ6 530 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 USP17L19D6RCP7 530 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 USP17L20D6RJB6 530 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 SPOPO43791 374 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 DKC1O60832 514 aaKnown RBP eCLIP4.45□□□□□ -1.7
UBE4A-201ENST00000252108 PAEPP09466 180 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 ITGB5P18084 799 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 KLRC1P26715 233 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 DRG2P55039 364 aaKnown RBP4.45□□□□□ -1.7
UBE4A-201ENST00000252108 USP17L24Q0WX57 530 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 DYNC1I2Q13409 638 aaKnown RBP4.45□□□□□ -1.7
UBE4A-201ENST00000252108 USP17L6PQ6QN14 398 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 ZNF365Q70YC5 407 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 CCDC105Q8IYK2 499 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 PGM2Q96G03 612 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 PACSIN1Q9BY11 444 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 MAF1Q9H063 256 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 NEUROG2Q9H2A3 272 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 KCNK9Q9NPC2 374 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 HOMER2Q9NSB8 354 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 CTNNAL1Q9UBT7 734 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 CNTN6Q9UQ52 1028 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.45□□□□□ -1.7
UBE4A-201ENST00000252108 CIB2O75838 187 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 EYA4O95677 639 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 TMEM253P0C7T8 217 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 PLA2G4BP0C869 781 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 TAL1P17542 331 aaPredicted RBP4.45□□□□□ -1.7
UBE4A-201ENST00000252108 NR2F2P24468 414 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 PHBP35232 272 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 PEX5P50542 639 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 BPIFB4P59827 614 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 DCAF17Q5H9S7 520 aaPredicted RBP4.45□□□□□ -1.7
UBE4A-201ENST00000252108 C6orf89Q6UWU4 347 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 DYMQ7RTS9 669 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 PLIN2Q99541 437 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 KANSL2Q9H9L4 492 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 KCND2Q9NZV8 630 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 ZNF233A6NK53 670 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 P4HA2O15460 535 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 TRAPPC3O43617 180 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 ECEL1O95672 775 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 FTCDO95954 541 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 GLI1P08151 1106 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 MAGOHP61326 146 aaKnown RBP4.45□□□□□ -1.7
UBE4A-201ENST00000252108 SNRPFP62306 86 aaKnown RBP4.45□□□□□ -1.7
UBE4A-201ENST00000252108 MRPS9P82933 396 aaKnown RBP4.45□□□□□ -1.7
UBE4A-201ENST00000252108 CYP1B1Q16678 543 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 MAP3K21Q5TCX8 1036 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 FBXW10Q5XX13 1052 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 SLC39A4Q6P5W5 647 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 MAGOHBQ96A72 148 aaKnown RBP4.45□□□□□ -1.7
UBE4A-201ENST00000252108 PRMT6Q96LA8 375 aaPredicted RBP4.45□□□□□ -1.7
UBE4A-201ENST00000252108 PSMB7Q99436 277 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 NTPCRQ9BSD7 190 aaKnown RBP4.45□□□□□ -1.7
UBE4A-201ENST00000252108 ADAM7Q9H2U9 754 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 TUFT1Q9NNX1 390 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 VCX3AQ9NNX9 186 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.45□□□□□ -1.7
UBE4A-201ENST00000252108 ANKIB1Q9P2G1 1089 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 ARHGAP28Q9P2N2 729 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 BCAP29Q9UHQ4 241 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 PRR12Q9ULL5 1215 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 COG5Q9UP83 839 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 STYXL1Q9Y6J8 313 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 TRPM7Q96QT4 1865 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 RSPH10B2B2RC85 870 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 RSPH10BP0C881 870 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 SKIP12755 728 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 NCKAP1LP55160 1127 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 MRPS35P82673 323 aaKnown RBP4.44□□□□□ -1.7
UBE4A-201ENST00000252108 ITGB3BPQ13352 177 aaPredicted RBP4.44□□□□□ -1.7
UBE4A-201ENST00000252108 PPP2R5AQ15172 486 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 AOC3Q16853 763 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 GRIPAP1Q4V328 841 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 CCDC62Q6P9F0 684 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 FOXR1Q6PIV2 292 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 TAS1R3Q7RTX0 852 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 NLGN1Q8N2Q7 840 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 ATXN2LQ8WWM7 1075 aaKnown RBP4.44□□□□□ -1.7
UBE4A-201ENST00000252108 SLCO2A1Q92959 643 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 SMC6Q96SB8 1091 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 FGFR1OP2Q9NVK5 253 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 PI4KBQ9UBF8 816 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 IKBKGQ9Y6K9 419 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 F5H6K3 240 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 H0YCG3 227 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 ECE2O60344 883 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 CLTAP09496 248 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 CHRNB2P17787 502 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 HSD17B3P37058 310 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 STAT3P40763 770 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 GUCY1A3Q02108 690 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 KLRC3Q07444 240 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 TRADDQ15628 312 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 ANKRD20A8PQ5CZ79 823 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 ZNF720Q7Z2F6 126 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 KRT27Q7Z3Y8 459 aa4.44□□□□□ -1.7
UBE4A-201ENST00000252108 NT5DC3Q86UY8 548 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms