RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 SPATC1LQ9H0A9 340 aa18.31■□□□□ 0.52
FOXA1-201ENST00000250448 METTL14Q9HCE5 456 aaKnown RBP18.31■□□□□ 0.52
FOXA1-201ENST00000250448 AGTPBP1Q9UPW5 1226 aa18.31■□□□□ 0.52
FOXA1-201ENST00000250448 FRMPD4Q14CM0 1322 aa18.3■□□□□ 0.52
FOXA1-201ENST00000250448 MYPNQ86TC9 1320 aa18.3■□□□□ 0.52
FOXA1-201ENST00000250448 BACH1O14867 736 aa18.3■□□□□ 0.52
FOXA1-201ENST00000250448 BYSLQ13895 437 aaKnown RBP18.3■□□□□ 0.52
FOXA1-201ENST00000250448 SPRED3Q2MJR0 410 aa18.3■□□□□ 0.52
FOXA1-201ENST00000250448 ANKRD20A8PQ5CZ79 823 aa18.3■□□□□ 0.52
FOXA1-201ENST00000250448 WDR78Q5VTH9 848 aa18.3■□□□□ 0.52
FOXA1-201ENST00000250448 GJB7Q6PEY0 223 aa18.3■□□□□ 0.52
FOXA1-201ENST00000250448 TATDN2Q93075 761 aa18.3■□□□□ 0.52
FOXA1-201ENST00000250448 TRIM51Q9BSJ1 452 aa18.3■□□□□ 0.52
FOXA1-201ENST00000250448 AMFRQ9UKV5 643 aa18.3■□□□□ 0.52
FOXA1-201ENST00000250448 SFI1A8K8P3 1242 aa18.3■□□□□ 0.52
FOXA1-201ENST00000250448 SLC16A3O15427 465 aaKnown RBP18.3■□□□□ 0.52
FOXA1-201ENST00000250448 CNMDO75829 334 aa18.3■□□□□ 0.52
FOXA1-201ENST00000250448 RGS20O76081 388 aa18.3■□□□□ 0.52
FOXA1-201ENST00000250448 NR3C1P04150 777 aa18.3■□□□□ 0.52
FOXA1-201ENST00000250448 FERP16591 822 aa18.3■□□□□ 0.52
FOXA1-201ENST00000250448 POU5F1Q01860 360 aaKnown RBP18.3■□□□□ 0.52
FOXA1-201ENST00000250448 GPAT2Q6NUI2 795 aa18.3■□□□□ 0.52
FOXA1-201ENST00000250448 MIER3Q7Z3K6 550 aa18.3■□□□□ 0.52
FOXA1-201ENST00000250448 VSIG10LQ86VR7 867 aa18.3■□□□□ 0.52
FOXA1-201ENST00000250448 SLC35C1Q96A29 364 aa18.3■□□□□ 0.52
FOXA1-201ENST00000250448 POLR3CQ9BUI4 534 aaPredicted RBP18.3■□□□□ 0.52
FOXA1-201ENST00000250448 MOV10L1Q9BXT6 1211 aaKnown RBP18.3■□□□□ 0.52
FOXA1-201ENST00000250448 TYW1Q9NV66 732 aaKnown RBP18.3■□□□□ 0.52
FOXA1-201ENST00000250448 MAP3K20Q9NYL2 800 aaKnown RBP18.3■□□□□ 0.52
FOXA1-201ENST00000250448 PNMA2Q9UL42 364 aa18.3■□□□□ 0.52
FOXA1-201ENST00000250448 RABGAP1Q9Y3P9 1069 aa18.3■□□□□ 0.52
FOXA1-201ENST00000250448 NCANO14594 1321 aa18.29■□□□□ 0.52
FOXA1-201ENST00000250448 TMEM150BA6NC51 233 aa18.29■□□□□ 0.52
FOXA1-201ENST00000250448 CELF2O95319 508 aaKnown RBP18.29■□□□□ 0.52
FOXA1-201ENST00000250448 GALCP54803 685 aa18.29■□□□□ 0.52
FOXA1-201ENST00000250448 NSUN6Q8TEA1 469 aaKnown RBP18.29■□□□□ 0.52
FOXA1-201ENST00000250448 ATP8B4Q8TF62 1192 aa18.29■□□□□ 0.52
FOXA1-201ENST00000250448 LXNQ9BS40 222 aa18.29■□□□□ 0.52
FOXA1-201ENST00000250448 TTC7AQ9ULT0 858 aaPredicted RBP18.29■□□□□ 0.52
FOXA1-201ENST00000250448 PPFIA2O75334 1257 aa18.29■□□□□ 0.52
FOXA1-201ENST00000250448 GFPT2O94808 682 aa18.29■□□□□ 0.52
FOXA1-201ENST00000250448 FGGP02679 453 aa18.29■□□□□ 0.52
FOXA1-201ENST00000250448 CDR1P51861 262 aa18.29■□□□□ 0.52
FOXA1-201ENST00000250448 IFFO1Q0D2I5 559 aa18.29■□□□□ 0.52
FOXA1-201ENST00000250448 B3GNT9Q6UX72 402 aa18.29■□□□□ 0.52
FOXA1-201ENST00000250448 LNX1Q8TBB1 728 aaPredicted RBP18.29■□□□□ 0.52
FOXA1-201ENST00000250448 TLCD1Q96CP7 247 aa18.29■□□□□ 0.52
FOXA1-201ENST00000250448 CNOT10Q9H9A5 744 aaKnown RBP18.29■□□□□ 0.52
FOXA1-201ENST00000250448 LRRC4CQ9HCJ2 640 aa18.29■□□□□ 0.52
FOXA1-201ENST00000250448 LOC285556D6RIA3 1793 aa18.29■□□□□ 0.52
FOXA1-201ENST00000250448 BCRP11274 1271 aa18.28■□□□□ 0.52
FOXA1-201ENST00000250448 CCND2P30279 289 aa18.28■□□□□ 0.52
FOXA1-201ENST00000250448 RDXP35241 583 aaKnown RBP18.28■□□□□ 0.52
FOXA1-201ENST00000250448 CASP4P49662 377 aa18.28■□□□□ 0.52
FOXA1-201ENST00000250448 BMT2Q1RMZ1 405 aa18.28■□□□□ 0.52
FOXA1-201ENST00000250448 SPDYCQ5MJ68 293 aa18.28■□□□□ 0.52
FOXA1-201ENST00000250448 SYT2Q8N9I0 419 aaPredicted RBP18.28■□□□□ 0.52
FOXA1-201ENST00000250448 FMO2Q99518 471 aa18.28■□□□□ 0.52
FOXA1-201ENST00000250448 RIT2Q99578 217 aa18.28■□□□□ 0.52
FOXA1-201ENST00000250448 RAB17Q9H0T7 212 aa18.28■□□□□ 0.52
FOXA1-201ENST00000250448 RBPJLQ9UBG7 517 aa18.28■□□□□ 0.52
FOXA1-201ENST00000250448 DOCK5Q9H7D0 1870 aa18.28■□□□□ 0.52
FOXA1-201ENST00000250448 DNM1LO00429 736 aa18.28■□□□□ 0.52
FOXA1-201ENST00000250448 BUB1BO60566 1050 aaPredicted RBP18.28■□□□□ 0.52
FOXA1-201ENST00000250448 PGK2P07205 417 aa18.28■□□□□ 0.52
FOXA1-201ENST00000250448 RPL13P26373 211 aaKnown RBP18.28■□□□□ 0.52
FOXA1-201ENST00000250448 EIF3BP55884 814 aaKnown RBP18.28■□□□□ 0.52
FOXA1-201ENST00000250448 GKAP1Q5VSY0 366 aaPredicted RBP18.28■□□□□ 0.52
FOXA1-201ENST00000250448 OLIG1Q8TAK6 271 aa18.28■□□□□ 0.52
FOXA1-201ENST00000250448 TXLNGYQ9BZA5 131 aa18.28■□□□□ 0.52
FOXA1-201ENST00000250448 TRIM31Q9BZY9 425 aa18.28■□□□□ 0.52
FOXA1-201ENST00000250448 LCTP09848 1927 aa18.28■□□□□ 0.52
FOXA1-201ENST00000250448 KIAA1217Q5T5P2 1943 aa18.28■□□□□ 0.52
FOXA1-201ENST00000250448 GTPBP10A4D1E9 387 aaKnown RBP18.28■□□□□ 0.52
FOXA1-201ENST00000250448 ECM2O94769 699 aaPredicted RBP18.28■□□□□ 0.52
FOXA1-201ENST00000250448 CCNE2O96020 404 aa18.28■□□□□ 0.52
FOXA1-201ENST00000250448 DRD4P21917 467 aa18.28■□□□□ 0.52
FOXA1-201ENST00000250448 STAT1P42224 750 aa18.28■□□□□ 0.52
FOXA1-201ENST00000250448 ATP8A1Q9Y2Q0 1164 aa18.28■□□□□ 0.52
FOXA1-201ENST00000250448 PTENP60484 403 aa18.27■□□□□ 0.52
FOXA1-201ENST00000250448 UGCGQ16739 394 aa18.27■□□□□ 0.52
FOXA1-201ENST00000250448 MAEAQ7L5Y9 396 aa18.27■□□□□ 0.52
FOXA1-201ENST00000250448 EEPD1Q7L9B9 569 aa18.27■□□□□ 0.52
FOXA1-201ENST00000250448 RIOX2Q8IUF8 465 aa18.27■□□□□ 0.52
FOXA1-201ENST00000250448 RFFLQ8WZ73 363 aa18.27■□□□□ 0.52
FOXA1-201ENST00000250448 GBA2Q9HCG7 927 aaPredicted RBP18.27■□□□□ 0.52
FOXA1-201ENST00000250448 OSGEPQ9NPF4 335 aa18.27■□□□□ 0.52
FOXA1-201ENST00000250448 DDX3YO15523 660 aaKnown RBP18.27■□□□□ 0.51
FOXA1-201ENST00000250448 EVI5O60447 810 aa18.27■□□□□ 0.51
FOXA1-201ENST00000250448 SNAPC2Q13487 334 aa18.27■□□□□ 0.51
FOXA1-201ENST00000250448 LACTB2Q53H82 288 aaPredicted RBP18.27■□□□□ 0.51
FOXA1-201ENST00000250448 DCAF12L1Q5VU92 463 aa18.27■□□□□ 0.51
FOXA1-201ENST00000250448 CPLX4Q7Z7G2 160 aa18.27■□□□□ 0.51
FOXA1-201ENST00000250448 HOOK3Q86VS8 718 aa18.27■□□□□ 0.51
FOXA1-201ENST00000250448 SLC30A5Q8TAD4 765 aa18.27■□□□□ 0.51
FOXA1-201ENST00000250448 CXorf56Q9H5V9 222 aa18.27■□□□□ 0.51
FOXA1-201ENST00000250448 NR2E1Q9Y466 385 aa18.27■□□□□ 0.51
FOXA1-201ENST00000250448 EYA4O95677 639 aa18.26■□□□□ 0.51
FOXA1-201ENST00000250448 SCTRP47872 440 aa18.26■□□□□ 0.51
FOXA1-201ENST00000250448 CYB5D1Q6P9G0 228 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms