RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 SLC29A2Q14542 456 aa27.48■■□□□ 1.99
RAB40C-201ENST00000248139 PGM5Q15124 567 aa27.48■■□□□ 1.99
RAB40C-201ENST00000248139 DAB2IPQ5VWQ8 1189 aa27.48■■□□□ 1.99
RAB40C-201ENST00000248139 CCDC137Q6PK04 289 aaKnown RBP27.48■■□□□ 1.99
RAB40C-201ENST00000248139 ARFGAP2Q8N6H7 521 aa27.48■■□□□ 1.99
RAB40C-201ENST00000248139 ZNF653Q96CK0 615 aa27.48■■□□□ 1.99
RAB40C-201ENST00000248139 RMDN3Q96TC7 470 aa27.48■■□□□ 1.99
RAB40C-201ENST00000248139 PHF20L1A8MW92 1017 aa27.48■■□□□ 1.99
RAB40C-201ENST00000248139 PLA2G6O60733 806 aa27.48■■□□□ 1.99
RAB40C-201ENST00000248139 PMS2P54278 862 aa27.48■■□□□ 1.99
RAB40C-201ENST00000248139 BIRC3Q13489 604 aa27.48■■□□□ 1.99
RAB40C-201ENST00000248139 PCNX4Q63HM2 1172 aa27.48■■□□□ 1.99
RAB40C-201ENST00000248139 ZNF564Q8TBZ8 553 aaPredicted RBP27.48■■□□□ 1.99
RAB40C-201ENST00000248139 NAP1L3Q99457 506 aaPredicted RBP27.48■■□□□ 1.99
RAB40C-201ENST00000248139 DENND3A2RUS2 1198 aa27.47■■□□□ 1.99
RAB40C-201ENST00000248139 PHF2O75151 1096 aa27.47■■□□□ 1.99
RAB40C-201ENST00000248139 NPTX2P47972 431 aa27.47■■□□□ 1.99
RAB40C-201ENST00000248139 MYBPC2Q14324 1141 aa27.47■■□□□ 1.99
RAB40C-201ENST00000248139 ANO5Q75V66 913 aa27.47■■□□□ 1.99
RAB40C-201ENST00000248139 TBX20Q9UMR3 447 aa27.47■■□□□ 1.99
RAB40C-201ENST00000248139 DIS3Q9Y2L1 958 aaKnown RBP27.47■■□□□ 1.99
RAB40C-201ENST00000248139 GMNCA6NCL1 334 aa27.47■■□□□ 1.99
RAB40C-201ENST00000248139 SSTR3P32745 418 aaPredicted RBP27.47■■□□□ 1.99
RAB40C-201ENST00000248139 RIPK3Q9Y572 518 aa27.47■■□□□ 1.99
RAB40C-201ENST00000248139 CYP11B1P15538 503 aa27.46■■□□□ 1.99
RAB40C-201ENST00000248139 RFX1P22670 979 aa27.46■■□□□ 1.99
RAB40C-201ENST00000248139 C11orf63Q6NUN7 778 aa27.46■■□□□ 1.99
RAB40C-201ENST00000248139 TMEM161BQ8NDZ6 487 aa27.46■■□□□ 1.99
RAB40C-201ENST00000248139 PGAP2Q9UHJ9 254 aa27.46■■□□□ 1.99
RAB40C-201ENST00000248139 IFI35P80217 286 aaPredicted RBP27.46■■□□□ 1.99
RAB40C-201ENST00000248139 CCDC25Q86WR0 208 aa27.46■■□□□ 1.99
RAB40C-201ENST00000248139 HELQQ8TDG4 1101 aa27.46■■□□□ 1.99
RAB40C-201ENST00000248139 PARD3BQ8TEW8 1205 aa27.46■■□□□ 1.99
RAB40C-201ENST00000248139 PSMD1Q99460 953 aa27.46■■□□□ 1.99
RAB40C-201ENST00000248139 FZD1Q9UP38 647 aa27.46■■□□□ 1.99
RAB40C-201ENST00000248139 PCNTO95613 3336 aa27.46■■□□□ 1.99
RAB40C-201ENST00000248139 SYNGAP1Q96PV0 1343 aa27.45■■□□□ 1.99
RAB40C-201ENST00000248139 RARAP10276 462 aa27.45■■□□□ 1.99
RAB40C-201ENST00000248139 SNX1Q13596 522 aa27.45■■□□□ 1.99
RAB40C-201ENST00000248139 SPRED3Q2MJR0 410 aa27.45■■□□□ 1.99
RAB40C-201ENST00000248139 SLC39A4Q6P5W5 647 aa27.45■■□□□ 1.99
RAB40C-201ENST00000248139 CCDC105Q8IYK2 499 aa27.45■■□□□ 1.99
RAB40C-201ENST00000248139 DDX20Q9UHI6 824 aaKnown RBP27.45■■□□□ 1.99
RAB40C-201ENST00000248139 TRAPPC3O43617 180 aa27.45■■□□□ 1.98
RAB40C-201ENST00000248139 KRT5P13647 590 aa27.45■■□□□ 1.98
RAB40C-201ENST00000248139 SF3B2Q13435 895 aaKnown RBP27.45■■□□□ 1.98
RAB40C-201ENST00000248139 AGBL2Q5U5Z8 902 aa27.45■■□□□ 1.98
RAB40C-201ENST00000248139 C1orf54Q8WWF1 131 aa27.45■■□□□ 1.98
RAB40C-201ENST00000248139 TBC1D12O60347 775 aa27.44■■□□□ 1.98
RAB40C-201ENST00000248139 NCKAP1LP55160 1127 aa27.44■■□□□ 1.98
RAB40C-201ENST00000248139 SEL1L2Q5TEA6 688 aa27.44■■□□□ 1.98
RAB40C-201ENST00000248139 C12orf56Q8IXR9 622 aa27.44■■□□□ 1.98
RAB40C-201ENST00000248139 SHC3Q92529 594 aa27.44■■□□□ 1.98
RAB40C-201ENST00000248139 ADGRA3Q8IWK6 1321 aa27.44■■□□□ 1.98
RAB40C-201ENST00000248139 CLDN3O15551 220 aa27.44■■□□□ 1.98
RAB40C-201ENST00000248139 DHX34Q14147 1143 aaKnown RBP27.44■■□□□ 1.98
RAB40C-201ENST00000248139 FMNL3Q8IVF7 1028 aa27.44■■□□□ 1.98
RAB40C-201ENST00000248139 TTLL6Q8N841 843 aa27.44■■□□□ 1.98
RAB40C-201ENST00000248139 POMGNT1Q8WZA1 660 aa27.44■■□□□ 1.98
RAB40C-201ENST00000248139 AZI2Q9H6S1 392 aa27.44■■□□□ 1.98
RAB40C-201ENST00000248139 SLC38A10Q9HBR0 1119 aa27.44■■□□□ 1.98
RAB40C-201ENST00000248139 MIF4GDA9UHW6 222 aaKnown RBP27.44■■□□□ 1.98
RAB40C-201ENST00000248139 CPP00450 1065 aa27.44■■□□□ 1.98
RAB40C-201ENST00000248139 PSMC5P62195 406 aa27.44■■□□□ 1.98
RAB40C-201ENST00000248139 MTMR2Q13614 643 aa27.44■■□□□ 1.98
RAB40C-201ENST00000248139 KRT39Q6A163 491 aa27.44■■□□□ 1.98
RAB40C-201ENST00000248139 CD101Q93033 1021 aa27.44■■□□□ 1.98
RAB40C-201ENST00000248139 SELENOSQ9BQE4 189 aa27.44■■□□□ 1.98
RAB40C-201ENST00000248139 PDCD2LQ9BRP1 358 aa27.44■■□□□ 1.98
RAB40C-201ENST00000248139 PABPC3Q9H361 631 aaKnown RBP27.44■■□□□ 1.98
RAB40C-201ENST00000248139 KMT5AQ9NQR1 393 aa27.44■■□□□ 1.98
RAB40C-201ENST00000248139 FAM187AA6NFU0 413 aa27.43■■□□□ 1.98
RAB40C-201ENST00000248139 P4HA2O15460 535 aa27.43■■□□□ 1.98
RAB40C-201ENST00000248139 ATP2C2O75185 946 aa27.43■■□□□ 1.98
RAB40C-201ENST00000248139 MFAP3P55082 362 aa27.43■■□□□ 1.98
RAB40C-201ENST00000248139 HADHBP55084 474 aaKnown RBP27.43■■□□□ 1.98
RAB40C-201ENST00000248139 ARHGEF16Q5VV41 709 aa27.43■■□□□ 1.98
RAB40C-201ENST00000248139 MCF2L2Q86YR7 1114 aa27.43■■□□□ 1.98
RAB40C-201ENST00000248139 EPS8L3Q8TE67 593 aaKnown RBP27.43■■□□□ 1.98
RAB40C-201ENST00000248139 DEFB129Q9H1M3 183 aa27.43■■□□□ 1.98
RAB40C-201ENST00000248139 DNAJC17Q9NVM6 304 aaKnown RBP27.43■■□□□ 1.98
RAB40C-201ENST00000248139 PFASO15067 1338 aa27.43■■□□□ 1.98
RAB40C-201ENST00000248139 MAPTP10636 758 aaKnown RBP27.43■■□□□ 1.98
RAB40C-201ENST00000248139 CTNNA2P26232 953 aa27.43■■□□□ 1.98
RAB40C-201ENST00000248139 DENND2CQ68D51 928 aa27.43■■□□□ 1.98
RAB40C-201ENST00000248139 SV2AQ7L0J3 742 aa27.43■■□□□ 1.98
RAB40C-201ENST00000248139 SLC13A5Q86YT5 568 aaPredicted RBP27.43■■□□□ 1.98
RAB40C-201ENST00000248139 C4orf19Q8IY42 314 aa27.43■■□□□ 1.98
RAB40C-201ENST00000248139 TBC1D22BQ9NU19 505 aa27.43■■□□□ 1.98
RAB40C-201ENST00000248139 ZNF862O60290 1169 aa27.42■■□□□ 1.98
RAB40C-201ENST00000248139 CHRNA3P32297 505 aa27.42■■□□□ 1.98
RAB40C-201ENST00000248139 CXCL9Q07325 125 aa27.42■■□□□ 1.98
RAB40C-201ENST00000248139 ALCAMQ13740 583 aa27.42■■□□□ 1.98
RAB40C-201ENST00000248139 CCDC38Q502W7 563 aa27.42■■□□□ 1.98
RAB40C-201ENST00000248139 CEP170P1Q96L14 293 aa27.42■■□□□ 1.98
RAB40C-201ENST00000248139 GABBR1Q9UBS5 961 aa27.42■■□□□ 1.98
RAB40C-201ENST00000248139 PCDHA3Q9Y5H8 950 aa27.42■■□□□ 1.98
RAB40C-201ENST00000248139 H0YHG0 523 aa27.42■■□□□ 1.98
RAB40C-201ENST00000248139 TRIP13Q15645 432 aaPredicted RBP27.42■■□□□ 1.98
RAB40C-201ENST00000248139 RNF207Q6ZRF8 634 aa27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms