RNA–Protein interactions for RNA: ENST00000246672.3

NR1D1-201, Transcript of nuclear receptor subfamily 1 group D member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NR1D1, Length 2,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1D1-201ENST00000246672 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.35□□□□□ -0.27
NR1D1-201ENST00000246672 TRIM74Q86UV6 250 aa13.35□□□□□ -0.27
NR1D1-201ENST00000246672 TRIM73Q86UV7 250 aa13.35□□□□□ -0.27
NR1D1-201ENST00000246672 MAIP1Q8WWC4 291 aa13.35□□□□□ -0.27
NR1D1-201ENST00000246672 OCEL1Q9H607 264 aa13.35□□□□□ -0.27
NR1D1-201ENST00000246672 DCLRE1BQ9H816 532 aa13.35□□□□□ -0.27
NR1D1-201ENST00000246672 NKIRAS1Q9NYS0 192 aa13.35□□□□□ -0.27
NR1D1-201ENST00000246672 CTTNBP2NLQ9P2B4 639 aa13.35□□□□□ -0.27
NR1D1-201ENST00000246672 TP73O15350 636 aa13.34□□□□□ -0.27
NR1D1-201ENST00000246672 CALUO43852 315 aaPredicted RBP13.34□□□□□ -0.27
NR1D1-201ENST00000246672 TTLL1O95922 423 aa13.34□□□□□ -0.27
NR1D1-201ENST00000246672 CETPP11597 493 aa13.34□□□□□ -0.27
NR1D1-201ENST00000246672 CHKAP35790 457 aa13.34□□□□□ -0.27
NR1D1-201ENST00000246672 CACNA2D1P54289 1103 aa13.34□□□□□ -0.27
NR1D1-201ENST00000246672 RPS8P62241 208 aaKnown RBP13.34□□□□□ -0.27
NR1D1-201ENST00000246672 DNAJC3Q13217 504 aa13.34□□□□□ -0.27
NR1D1-201ENST00000246672 PABPC4Q13310 644 aaKnown RBP eCLIP13.34□□□□□ -0.27
NR1D1-201ENST00000246672 KYNUQ16719 465 aa13.34□□□□□ -0.27
NR1D1-201ENST00000246672 ZC2HC1CQ53FD0 456 aaPredicted RBP13.34□□□□□ -0.27
NR1D1-201ENST00000246672 SNX30Q5VWJ9 437 aa13.34□□□□□ -0.27
NR1D1-201ENST00000246672 RFWD3Q6PCD5 774 aa13.34□□□□□ -0.27
NR1D1-201ENST00000246672 LRRC47Q8N1G4 583 aaKnown RBP13.34□□□□□ -0.27
NR1D1-201ENST00000246672 KLHL23Q8NBE8 558 aa13.34□□□□□ -0.27
NR1D1-201ENST00000246672 ATL2Q8NHH9 583 aa13.34□□□□□ -0.27
NR1D1-201ENST00000246672 NRG4Q8WWG1 115 aa13.34□□□□□ -0.27
NR1D1-201ENST00000246672 SLCO1B3Q9NPD5 702 aa13.34□□□□□ -0.27
NR1D1-201ENST00000246672 METTL5Q9NRN9 209 aaKnown RBP13.34□□□□□ -0.27
NR1D1-201ENST00000246672 STOML1Q9UBI4 398 aa13.34□□□□□ -0.27
NR1D1-201ENST00000246672 USH1CQ9Y6N9 552 aa13.34□□□□□ -0.27
NR1D1-201ENST00000246672 ASTN1O14525 1302 aa13.34□□□□□ -0.27
NR1D1-201ENST00000246672 MAPK13O15264 365 aa13.34□□□□□ -0.27
NR1D1-201ENST00000246672 PPP1R11O60927 126 aaPredicted RBP13.34□□□□□ -0.27
NR1D1-201ENST00000246672 KCNA3P22001 575 aa13.34□□□□□ -0.27
NR1D1-201ENST00000246672 VHLP40337 213 aa13.34□□□□□ -0.27
NR1D1-201ENST00000246672 EIF6P56537 245 aaKnown RBP13.34□□□□□ -0.27
NR1D1-201ENST00000246672 WDR4P57081 412 aaKnown RBP13.34□□□□□ -0.27
NR1D1-201ENST00000246672 STRN3Q13033 797 aa13.34□□□□□ -0.27
NR1D1-201ENST00000246672 ITPK1Q13572 414 aa13.34□□□□□ -0.27
NR1D1-201ENST00000246672 CCDC6Q16204 474 aa13.34□□□□□ -0.27
NR1D1-201ENST00000246672 SCG3Q8WXD2 468 aaKnown RBP13.34□□□□□ -0.27
NR1D1-201ENST00000246672 REEP2Q9BRK0 252 aa13.34□□□□□ -0.27
NR1D1-201ENST00000246672 DNAJC12Q9UKB3 198 aa13.34□□□□□ -0.27
NR1D1-201ENST00000246672 MAST2Q6P0Q8 1798 aa13.34□□□□□ -0.27
NR1D1-201ENST00000246672 SYNGAP1Q96PV0 1343 aa13.33□□□□□ -0.27
NR1D1-201ENST00000246672 RSPH10B2B2RC85 870 aa13.33□□□□□ -0.27
NR1D1-201ENST00000246672 GSTA2P09210 222 aa13.33□□□□□ -0.27
NR1D1-201ENST00000246672 RSPH10BP0C881 870 aa13.33□□□□□ -0.27
NR1D1-201ENST00000246672 COILP38432 576 aaPredicted RBP13.33□□□□□ -0.27
NR1D1-201ENST00000246672 SERPINB4P48594 390 aa13.33□□□□□ -0.27
NR1D1-201ENST00000246672 CALCOCO2Q13137 446 aa13.33□□□□□ -0.27
NR1D1-201ENST00000246672 LLGL1Q15334 1064 aa13.33□□□□□ -0.27
NR1D1-201ENST00000246672 C16orf86Q6ZW13 317 aa13.33□□□□□ -0.27
NR1D1-201ENST00000246672 EPM2AIP1Q7L775 607 aaPredicted RBP13.33□□□□□ -0.27
NR1D1-201ENST00000246672 ZC3H18Q86VM9 953 aaKnown RBP13.33□□□□□ -0.27
NR1D1-201ENST00000246672 ZNF287Q9HBT7 754 aa13.33□□□□□ -0.27
NR1D1-201ENST00000246672 CHORDC1Q9UHD1 332 aaPredicted RBP13.33□□□□□ -0.27
NR1D1-201ENST00000246672 hCG_1984214I3L0E3 225 aa13.33□□□□□ -0.28
NR1D1-201ENST00000246672 PDXKO00764 312 aa13.33□□□□□ -0.28
NR1D1-201ENST00000246672 HSPA6P17066 643 aa13.33□□□□□ -0.28
NR1D1-201ENST00000246672 TNFAIP3P21580 790 aa13.33□□□□□ -0.28
NR1D1-201ENST00000246672 DYNC1I2Q13409 638 aaKnown RBP13.33□□□□□ -0.28
NR1D1-201ENST00000246672 CLUL1Q15846 466 aa13.33□□□□□ -0.28
NR1D1-201ENST00000246672 DSTYKQ6XUX3 929 aa13.33□□□□□ -0.28
NR1D1-201ENST00000246672 CYFIP1Q7L576 1253 aa13.33□□□□□ -0.28
NR1D1-201ENST00000246672 SLC51AQ86UW1 340 aa13.33□□□□□ -0.28
NR1D1-201ENST00000246672 KSR1Q8IVT5 923 aa13.33□□□□□ -0.28
NR1D1-201ENST00000246672 CCDC24Q8N4L8 307 aa13.33□□□□□ -0.28
NR1D1-201ENST00000246672 ZNF713Q8N859 430 aaPredicted RBP13.33□□□□□ -0.28
NR1D1-201ENST00000246672 FBXO41Q8TF61 875 aa13.33□□□□□ -0.28
NR1D1-201ENST00000246672 SYT11Q9BT88 431 aa13.33□□□□□ -0.28
NR1D1-201ENST00000246672 METTL14Q9HCE5 456 aaKnown RBP13.33□□□□□ -0.28
NR1D1-201ENST00000246672 BTG4Q9NY30 223 aa13.33□□□□□ -0.28
NR1D1-201ENST00000246672 PHTF1Q9UMS5 762 aa13.33□□□□□ -0.28
NR1D1-201ENST00000246672 NAALADL1Q9UQQ1 740 aa13.33□□□□□ -0.28
NR1D1-201ENST00000246672 NAV1Q8NEY1 1877 aa13.33□□□□□ -0.28
NR1D1-201ENST00000246672 TJP3O95049 919 aa13.32□□□□□ -0.28
NR1D1-201ENST00000246672 SKIP12755 728 aa13.32□□□□□ -0.28
NR1D1-201ENST00000246672 GSTT1P30711 240 aa13.32□□□□□ -0.28
NR1D1-201ENST00000246672 CLK2P49760 499 aaKnown RBP13.32□□□□□ -0.28
NR1D1-201ENST00000246672 MOGSQ13724 837 aa13.32□□□□□ -0.28
NR1D1-201ENST00000246672 RCN1Q15293 331 aa13.32□□□□□ -0.28
NR1D1-201ENST00000246672 C4orf50Q6ZRC1 276 aa13.32□□□□□ -0.28
NR1D1-201ENST00000246672 CLEC10AQ8IUN9 316 aa13.32□□□□□ -0.28
NR1D1-201ENST00000246672 MARCH10Q8NA82 808 aaPredicted RBP13.32□□□□□ -0.28
NR1D1-201ENST00000246672 SH3TC2Q8TF17 1288 aa13.32□□□□□ -0.28
NR1D1-201ENST00000246672 C7orf43Q8WVR3 580 aa13.32□□□□□ -0.28
NR1D1-201ENST00000246672 GPR88Q9GZN0 384 aa13.32□□□□□ -0.28
NR1D1-201ENST00000246672 CHCHD3Q9NX63 227 aaKnown RBP13.32□□□□□ -0.28
NR1D1-201ENST00000246672 STARD13Q9Y3M8 1113 aa13.32□□□□□ -0.28
NR1D1-201ENST00000246672 STRCP1A6NGW2 1772 aa13.32□□□□□ -0.28
NR1D1-201ENST00000246672 MROH7Q68CQ1 1323 aa13.32□□□□□ -0.28
NR1D1-201ENST00000246672 PASKQ96RG2 1323 aa13.32□□□□□ -0.28
NR1D1-201ENST00000246672 ECE2O60344 883 aa13.32□□□□□ -0.28
NR1D1-201ENST00000246672 TTC4O95801 387 aa13.32□□□□□ -0.28
NR1D1-201ENST00000246672 PYGMP11217 842 aa13.32□□□□□ -0.28
NR1D1-201ENST00000246672 MARK3P27448 753 aa13.32□□□□□ -0.28
NR1D1-201ENST00000246672 IL9RQ01113 521 aa13.32□□□□□ -0.28
NR1D1-201ENST00000246672 ARHGAP44Q17R89 818 aa13.32□□□□□ -0.28
NR1D1-201ENST00000246672 PWWP2AQ96N64 755 aa13.32□□□□□ -0.28
NR1D1-201ENST00000246672 MIPEPQ99797 713 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms