RNA–Protein interactions for RNA: ENST00000245441.9

NIN-201, Transcript of ninein, humanhuman

APPRIS P5 TSL 5 BASIC

Gene NIN, Length 10,293 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIN-201ENST00000245441 HNRNPCL2B2RXH8 293 aa12.14□□□□□ -0.47
NIN-201ENST00000245441 KRT17Q04695 432 aa12.14□□□□□ -0.47
NIN-201ENST00000245441 ATL2Q8NHH9 583 aa12.14□□□□□ -0.47
NIN-201ENST00000245441 ALKBH8Q96BT7 664 aaKnown RBP12.14□□□□□ -0.47
NIN-201ENST00000245441 STK33Q9BYT3 514 aa12.14□□□□□ -0.47
NIN-201ENST00000245441 E9PMD0 336 aa12.14□□□□□ -0.47
NIN-201ENST00000245441 IZUMO3Q5VZ72 239 aa12.14□□□□□ -0.47
NIN-201ENST00000245441 RASSF3Q86WH2 238 aa12.14□□□□□ -0.47
NIN-201ENST00000245441 CDKL3Q8IVW4 592 aaPredicted RBP12.14□□□□□ -0.47
NIN-201ENST00000245441 THNSL1Q8IYQ7 743 aa12.14□□□□□ -0.47
NIN-201ENST00000245441 EIF2AK1Q9BQI3 630 aaKnown RBP12.14□□□□□ -0.47
NIN-201ENST00000245441 RBAKQ9NYW8 714 aaPredicted RBP12.14□□□□□ -0.47
NIN-201ENST00000245441 AFDNP55196 1824 aaKnown RBP12.14□□□□□ -0.47
NIN-201ENST00000245441 ANKRD65E5RJM6 399 aa12.14□□□□□ -0.47
NIN-201ENST00000245441 EIF3HO15372 352 aaKnown RBP eCLIP12.14□□□□□ -0.47
NIN-201ENST00000245441 CRKP46108 304 aa12.14□□□□□ -0.47
NIN-201ENST00000245441 RAD23BP54727 409 aa12.14□□□□□ -0.47
NIN-201ENST00000245441 VSNL1P62760 191 aa12.14□□□□□ -0.47
NIN-201ENST00000245441 AP1B1Q10567 949 aa12.14□□□□□ -0.47
NIN-201ENST00000245441 KYAT1Q16773 422 aa12.14□□□□□ -0.47
NIN-201ENST00000245441 PDXDC1Q6P996 788 aa12.14□□□□□ -0.47
NIN-201ENST00000245441 RNF25Q96BH1 459 aaPredicted RBP12.14□□□□□ -0.47
NIN-201ENST00000245441 TIPINQ9BVW5 301 aa12.14□□□□□ -0.47
NIN-201ENST00000245441 ZNF212Q9UDV6 495 aa12.14□□□□□ -0.47
NIN-201ENST00000245441 CITO14578 2027 aa12.14□□□□□ -0.47
NIN-201ENST00000245441 IFT43Q96FT9 208 aa12.14□□□□□ -0.47
NIN-201ENST00000245441 KCND2Q9NZV8 630 aa12.14□□□□□ -0.47
NIN-201ENST00000245441 RASSF10A6NK89 507 aa12.14□□□□□ -0.47
NIN-201ENST00000245441 PSMC5P62195 406 aa12.14□□□□□ -0.47
NIN-201ENST00000245441 TUFT1Q9NNX1 390 aa12.14□□□□□ -0.47
NIN-201ENST00000245441 URB1O60287 2271 aaKnown RBP12.14□□□□□ -0.47
NIN-201ENST00000245441 CFAP69A5D8W1 941 aa12.13□□□□□ -0.47
NIN-201ENST00000245441 P4HBP07237 508 aaKnown RBP12.13□□□□□ -0.47
NIN-201ENST00000245441 IMPG1Q17R60 797 aa12.13□□□□□ -0.47
NIN-201ENST00000245441 FAM102AQ5T9C2 384 aaPredicted RBP12.13□□□□□ -0.47
NIN-201ENST00000245441 GLYCTKQ8IVS8 523 aa12.13□□□□□ -0.47
NIN-201ENST00000245441 GSG1L2A8MUP6 293 aa12.13□□□□□ -0.47
NIN-201ENST00000245441 E5RI56 91 aa12.13□□□□□ -0.47
NIN-201ENST00000245441 SERPINB10P48595 397 aa12.13□□□□□ -0.47
NIN-201ENST00000245441 NCAPHQ15003 741 aa12.13□□□□□ -0.47
NIN-201ENST00000245441 CCNYL1Q8N7R7 359 aa12.13□□□□□ -0.47
NIN-201ENST00000245441 OSBPL1AQ9BXW6 950 aa12.13□□□□□ -0.47
NIN-201ENST00000245441 STX18Q9P2W9 335 aaKnown RBP12.13□□□□□ -0.47
NIN-201ENST00000245441 LIMA1Q9UHB6 759 aaKnown RBP12.13□□□□□ -0.47
NIN-201ENST00000245441 ZHX2Q9Y6X8 837 aa12.13□□□□□ -0.47
NIN-201ENST00000245441 AARSP49588 968 aaKnown RBP eCLIP12.13□□□□□ -0.47
NIN-201ENST00000245441 TSPY1Q01534 308 aa12.13□□□□□ -0.47
NIN-201ENST00000245441 MAP3K10Q02779 954 aa12.13□□□□□ -0.47
NIN-201ENST00000245441 EFHC2Q5JST6 749 aa12.13□□□□□ -0.47
NIN-201ENST00000245441 INTS2Q9H0H0 1204 aaKnown RBP12.13□□□□□ -0.47
NIN-201ENST00000245441 FAM49AQ9H0Q0 323 aaPredicted RBP12.13□□□□□ -0.47
NIN-201ENST00000245441 ZNF302Q9NR11 478 aa12.13□□□□□ -0.47
NIN-201ENST00000245441 ARHGAP26Q9UNA1 814 aa12.13□□□□□ -0.47
NIN-201ENST00000245441 FGFR4P22455 802 aa12.13□□□□□ -0.47
NIN-201ENST00000245441 EXOSC10Q01780 885 aaKnown RBP12.13□□□□□ -0.47
NIN-201ENST00000245441 KIRREL3Q8IZU9 778 aa12.13□□□□□ -0.47
NIN-201ENST00000245441 GFM2Q969S9 779 aaKnown RBP12.13□□□□□ -0.47
NIN-201ENST00000245441 PRMT1Q99873 361 aaKnown RBP12.13□□□□□ -0.47
NIN-201ENST00000245441 FCER1AP12319 257 aa12.13□□□□□ -0.47
NIN-201ENST00000245441 SLC10A5Q5PT55 438 aa12.13□□□□□ -0.47
NIN-201ENST00000245441 E4F1Q66K89 784 aaPredicted RBP12.13□□□□□ -0.47
NIN-201ENST00000245441 LRIG3Q6UXM1 1119 aa12.13□□□□□ -0.47
NIN-201ENST00000245441 MASTLQ96GX5 879 aa12.13□□□□□ -0.47
NIN-201ENST00000245441 CCT8L2Q96SF2 557 aa12.13□□□□□ -0.47
NIN-201ENST00000245441 M0QYV0 167 aa12.13□□□□□ -0.47
NIN-201ENST00000245441 APOL1O14791 398 aa12.13□□□□□ -0.47
NIN-201ENST00000245441 TYK2P29597 1187 aa12.13□□□□□ -0.47
NIN-201ENST00000245441 MDH1P40925 334 aaKnown RBP12.13□□□□□ -0.47
NIN-201ENST00000245441 NR1I3Q14994 352 aa12.13□□□□□ -0.47
NIN-201ENST00000245441 ACAP3Q96P50 834 aa12.13□□□□□ -0.47
NIN-201ENST00000245441 FOXP3Q9BZS1 431 aa12.13□□□□□ -0.47
NIN-201ENST00000245441 INO80Q9ULG1 1556 aaPredicted RBP12.13□□□□□ -0.47
NIN-201ENST00000245441 AP3B1O00203 1094 aa12.13□□□□□ -0.47
NIN-201ENST00000245441 PYGLP06737 847 aa12.13□□□□□ -0.47
NIN-201ENST00000245441 HIC1Q14526 733 aa12.13□□□□□ -0.47
NIN-201ENST00000245441 TWF2Q6IBS0 349 aaKnown RBP12.13□□□□□ -0.47
NIN-201ENST00000245441 GPD1LQ8N335 351 aa12.13□□□□□ -0.47
NIN-201ENST00000245441 POLR3FQ9H1D9 316 aaPredicted RBP12.13□□□□□ -0.47
NIN-201ENST00000245441 APEX2Q9UBZ4 518 aa12.13□□□□□ -0.47
NIN-201ENST00000245441 PCYT1AP49585 367 aa12.12□□□□□ -0.47
NIN-201ENST00000245441 CDH6P55285 790 aa12.12□□□□□ -0.47
NIN-201ENST00000245441 ABCA9Q8IUA7 1624 aa12.12□□□□□ -0.47
NIN-201ENST00000245441 GPR162Q16538 588 aa12.12□□□□□ -0.47
NIN-201ENST00000245441 SNRNP48Q6IEG0 339 aaKnown RBP12.12□□□□□ -0.47
NIN-201ENST00000245441 KIF2CQ99661 725 aa12.12□□□□□ -0.47
NIN-201ENST00000245441 UVRAGQ9P2Y5 699 aa12.12□□□□□ -0.47
NIN-201ENST00000245441 ZNF609O15014 1411 aa12.12□□□□□ -0.47
NIN-201ENST00000245441 KCNA4P22459 653 aa12.12□□□□□ -0.47
NIN-201ENST00000245441 MTF1Q14872 753 aa12.12□□□□□ -0.47
NIN-201ENST00000245441 PPP1R16BQ96T49 567 aa12.12□□□□□ -0.47
NIN-201ENST00000245441 FBXO2Q9UK22 296 aaPredicted RBP12.12□□□□□ -0.47
NIN-201ENST00000245441 SUGT1Q9Y2Z0 365 aa12.12□□□□□ -0.47
NIN-201ENST00000245441 PNPLA6Q8IY17 1366 aa12.12□□□□□ -0.47
NIN-201ENST00000245441 CASZ1Q86V15 1759 aa12.12□□□□□ -0.47
NIN-201ENST00000245441 ANKRD40Q6AI12 368 aa12.12□□□□□ -0.47
NIN-201ENST00000245441 SPATA21Q7Z572 469 aa12.12□□□□□ -0.47
NIN-201ENST00000245441 SRLQ86TD4 932 aa12.12□□□□□ -0.47
NIN-201ENST00000245441 RHPN2Q8IUC4 686 aa12.12□□□□□ -0.47
NIN-201ENST00000245441 SLC44A5Q8NCS7 719 aa12.12□□□□□ -0.47
NIN-201ENST00000245441 TRABDQ9H4I3 376 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms