RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 SEMA4DQ92854 862 aa23.63■■□□□ 1.37
RNF39-201ENST00000244360 SAAL1Q96ER3 474 aa23.63■■□□□ 1.37
RNF39-201ENST00000244360 SLITRK6Q9H5Y7 841 aa23.63■■□□□ 1.37
RNF39-201ENST00000244360 EFCC1Q9HA90 598 aa23.63■■□□□ 1.37
RNF39-201ENST00000244360 XPNPEP1Q9NQW7 623 aa23.63■■□□□ 1.37
RNF39-201ENST00000244360 SLC9A2Q9UBY0 812 aa23.63■■□□□ 1.37
RNF39-201ENST00000244360 ADGRA3Q8IWK6 1321 aa23.63■■□□□ 1.37
RNF39-201ENST00000244360 KRT14P02533 472 aa23.63■■□□□ 1.37
RNF39-201ENST00000244360 C11orf63Q6NUN7 778 aa23.63■■□□□ 1.37
RNF39-201ENST00000244360 SWSAP1Q6NVH7 229 aa23.63■■□□□ 1.37
RNF39-201ENST00000244360 ABHD15Q6UXT9 468 aa23.63■■□□□ 1.37
RNF39-201ENST00000244360 RPUSD2Q8IZ73 545 aaKnown RBP23.63■■□□□ 1.37
RNF39-201ENST00000244360 PIK3R5Q8WYR1 880 aa23.63■■□□□ 1.37
RNF39-201ENST00000244360 LRRC45Q96CN5 670 aa23.63■■□□□ 1.37
RNF39-201ENST00000244360 AP1M1Q9BXS5 423 aa23.63■■□□□ 1.37
RNF39-201ENST00000244360 CARD9Q9H257 536 aa23.63■■□□□ 1.37
RNF39-201ENST00000244360 FZD1Q9UP38 647 aa23.63■■□□□ 1.37
RNF39-201ENST00000244360 PPP2R3BQ9Y5P8 575 aa23.63■■□□□ 1.37
RNF39-201ENST00000244360 KRIT1O00522 736 aa23.62■■□□□ 1.37
RNF39-201ENST00000244360 SART1O43290 800 aaKnown RBP23.62■■□□□ 1.37
RNF39-201ENST00000244360 CHRNB2P17787 502 aa23.62■■□□□ 1.37
RNF39-201ENST00000244360 ACTR2P61160 394 aa23.62■■□□□ 1.37
RNF39-201ENST00000244360 MAP2K1Q02750 393 aaPredicted RBP23.62■■□□□ 1.37
RNF39-201ENST00000244360 B4GALNT4Q76KP1 1039 aa23.62■■□□□ 1.37
RNF39-201ENST00000244360 CCDC60Q8IWA6 550 aaPredicted RBP23.62■■□□□ 1.37
RNF39-201ENST00000244360 TRPM4Q8TD43 1214 aa23.62■■□□□ 1.37
RNF39-201ENST00000244360 TELO2Q9Y4R8 837 aa23.62■■□□□ 1.37
RNF39-201ENST00000244360 SPDYE16A6NNV3 312 aaPredicted RBP23.61■■□□□ 1.37
RNF39-201ENST00000244360 GUCY2FP51841 1108 aa23.61■■□□□ 1.37
RNF39-201ENST00000244360 MFAP3P55082 362 aa23.61■■□□□ 1.37
RNF39-201ENST00000244360 PRKCEQ02156 737 aa23.61■■□□□ 1.37
RNF39-201ENST00000244360 DCAF12L1Q5VU92 463 aa23.61■■□□□ 1.37
RNF39-201ENST00000244360 TADA2BQ86TJ2 420 aa23.61■■□□□ 1.37
RNF39-201ENST00000244360 HELQQ8TDG4 1101 aa23.61■■□□□ 1.37
RNF39-201ENST00000244360 ATP6V1G3Q96LB4 118 aa23.61■■□□□ 1.37
RNF39-201ENST00000244360 TMOD4Q9NZQ9 345 aa23.61■■□□□ 1.37
RNF39-201ENST00000244360 PPP1R1BQ9UD71 204 aaPredicted RBP23.61■■□□□ 1.37
RNF39-201ENST00000244360 LCTP09848 1927 aa23.61■■□□□ 1.37
RNF39-201ENST00000244360 SRRM3A6NNA2 597 aaPredicted RBP23.61■■□□□ 1.37
RNF39-201ENST00000244360 RTN2O75298 545 aa23.61■■□□□ 1.37
RNF39-201ENST00000244360 FTLP02792 175 aaPredicted RBP23.61■■□□□ 1.37
RNF39-201ENST00000244360 GZMAP12544 262 aa23.61■■□□□ 1.37
RNF39-201ENST00000244360 ECHS1P30084 290 aa23.61■■□□□ 1.37
RNF39-201ENST00000244360 SOX10P56693 466 aa23.61■■□□□ 1.37
RNF39-201ENST00000244360 CYP24A1Q07973 514 aa23.61■■□□□ 1.37
RNF39-201ENST00000244360 TRADDQ15628 312 aa23.61■■□□□ 1.37
RNF39-201ENST00000244360 GNPTABQ3T906 1256 aa23.61■■□□□ 1.37
RNF39-201ENST00000244360 NOP9Q86U38 636 aaKnown RBP23.61■■□□□ 1.37
RNF39-201ENST00000244360 KCNN1Q92952 543 aa23.61■■□□□ 1.37
RNF39-201ENST00000244360 CYP26B1Q9NR63 512 aa23.61■■□□□ 1.37
RNF39-201ENST00000244360 ARHGAP28Q9P2N2 729 aa23.61■■□□□ 1.37
RNF39-201ENST00000244360 AFG3L2Q9Y4W6 797 aa23.61■■□□□ 1.37
RNF39-201ENST00000244360 GOLGA6L10A6NI86 522 aa23.6■■□□□ 1.37
RNF39-201ENST00000244360 MTA2O94776 668 aa23.6■■□□□ 1.37
RNF39-201ENST00000244360 SGPL1O95470 568 aa23.6■■□□□ 1.37
RNF39-201ENST00000244360 ITGA4P13612 1032 aa23.6■■□□□ 1.37
RNF39-201ENST00000244360 GARTP22102 1010 aa23.6■■□□□ 1.37
RNF39-201ENST00000244360 BRDTQ58F21 947 aaPredicted RBP23.6■■□□□ 1.37
RNF39-201ENST00000244360 PCDHB18PQ96TA0 734 aa23.6■■□□□ 1.37
RNF39-201ENST00000244360 ATP6V0A4Q9HBG4 840 aa23.6■■□□□ 1.37
RNF39-201ENST00000244360 HOXC10Q9NYD6 342 aa23.6■■□□□ 1.37
RNF39-201ENST00000244360 NR1D1P20393 614 aa23.6■■□□□ 1.37
RNF39-201ENST00000244360 ABCD1P33897 745 aa23.6■■□□□ 1.37
RNF39-201ENST00000244360 USP37Q86T82 979 aa23.6■■□□□ 1.37
RNF39-201ENST00000244360 CCDC127Q96BQ5 260 aa23.6■■□□□ 1.37
RNF39-201ENST00000244360 DDX47Q9H0S4 455 aaKnown RBP23.6■■□□□ 1.37
RNF39-201ENST00000244360 SEPT9Q9UHD8 586 aaPredicted RBP23.6■■□□□ 1.37
RNF39-201ENST00000244360 FAM169AQ9Y6X4 670 aa23.6■■□□□ 1.37
RNF39-201ENST00000244360 SUPT20HL2P0C7V6 817 aa23.59■■□□□ 1.37
RNF39-201ENST00000244360 GPC5P78333 572 aa23.59■■□□□ 1.37
RNF39-201ENST00000244360 SUPT20HL1Q3ZLR7 823 aa23.59■■□□□ 1.37
RNF39-201ENST00000244360 SH3D19Q5HYK7 790 aa23.59■■□□□ 1.37
RNF39-201ENST00000244360 MIS18BP1Q6P0N0 1132 aa23.59■■□□□ 1.37
RNF39-201ENST00000244360 TAS1R3Q7RTX0 852 aa23.59■■□□□ 1.37
RNF39-201ENST00000244360 PPM1KQ8N3J5 372 aa23.59■■□□□ 1.37
RNF39-201ENST00000244360 ARFGAP2Q8N6H7 521 aa23.59■■□□□ 1.37
RNF39-201ENST00000244360 FBXL13Q8NEE6 735 aa23.59■■□□□ 1.37
RNF39-201ENST00000244360 SEC14L1Q92503 715 aa23.59■■□□□ 1.37
RNF39-201ENST00000244360 GGA3Q9NZ52 723 aa23.59■■□□□ 1.37
RNF39-201ENST00000244360 H0YCG3 227 aa23.59■■□□□ 1.37
RNF39-201ENST00000244360 ICAM3P32942 547 aa23.59■■□□□ 1.37
RNF39-201ENST00000244360 POU5F1Q01860 360 aaKnown RBP23.59■■□□□ 1.37
RNF39-201ENST00000244360 PDCLQ13371 301 aa23.59■■□□□ 1.37
RNF39-201ENST00000244360 HLTFQ14527 1009 aaKnown RBP eCLIP23.59■■□□□ 1.37
RNF39-201ENST00000244360 XKR3Q5GH77 459 aa23.59■■□□□ 1.37
RNF39-201ENST00000244360 GPD1LQ8N335 351 aa23.59■■□□□ 1.37
RNF39-201ENST00000244360 BBXQ8WY36 941 aaPredicted RBP23.59■■□□□ 1.37
RNF39-201ENST00000244360 POMGNT1Q8WZA1 660 aa23.59■■□□□ 1.37
RNF39-201ENST00000244360 SGIP1Q9BQI5 828 aa23.59■■□□□ 1.37
RNF39-201ENST00000244360 GPRC5DQ9NZD1 345 aa23.59■■□□□ 1.37
RNF39-201ENST00000244360 WDR90Q96KV7 1748 aa23.58■■□□□ 1.37
RNF39-201ENST00000244360 DOCK5Q9H7D0 1870 aa23.58■■□□□ 1.37
RNF39-201ENST00000244360 NDUFAB1O14561 156 aa23.58■■□□□ 1.37
RNF39-201ENST00000244360 PRPF4BQ13523 1007 aaKnown RBP23.58■■□□□ 1.37
RNF39-201ENST00000244360 MTMR3Q13615 1198 aa23.58■■□□□ 1.37
RNF39-201ENST00000244360 CLUL1Q15846 466 aa23.58■■□□□ 1.37
RNF39-201ENST00000244360 KCTD16Q68DU8 428 aa23.58■■□□□ 1.37
RNF39-201ENST00000244360 SH2D3CQ8N5H7 860 aa23.58■■□□□ 1.37
RNF39-201ENST00000244360 TAS1R2Q8TE23 839 aa23.58■■□□□ 1.37
RNF39-201ENST00000244360 NT5C1BQ96P26 610 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms