RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 PCDHA3Q9Y5H8 950 aa16.73■□□□□ 0.27
CTSD-201ENST00000236671 PHF20L1A8MW92 1017 aa16.72■□□□□ 0.27
CTSD-201ENST00000236671 TISP43B9A030 160 aa16.72■□□□□ 0.27
CTSD-201ENST00000236671 MNAT1P51948 309 aa16.72■□□□□ 0.27
CTSD-201ENST00000236671 SETQ01105 290 aaPredicted RBP16.72■□□□□ 0.27
CTSD-201ENST00000236671 C1orf220Q5T0J3 134 aa16.72■□□□□ 0.27
CTSD-201ENST00000236671 DENND2CQ68D51 928 aa16.72■□□□□ 0.27
CTSD-201ENST00000236671 RPUSD2Q8IZ73 545 aaKnown RBP16.72■□□□□ 0.27
CTSD-201ENST00000236671 ACER1Q8TDN7 264 aa16.72■□□□□ 0.27
CTSD-201ENST00000236671 CSRNP1Q96S65 589 aa16.72■□□□□ 0.27
CTSD-201ENST00000236671 TEKT3Q9BXF9 490 aa16.72■□□□□ 0.27
CTSD-201ENST00000236671 GLIS2Q9BZE0 524 aaPredicted RBP16.72■□□□□ 0.27
CTSD-201ENST00000236671 RANBP17Q9H2T7 1088 aaKnown RBP16.72■□□□□ 0.27
CTSD-201ENST00000236671 ZNF70Q9UC06 446 aaPredicted RBP16.72■□□□□ 0.27
CTSD-201ENST00000236671 TMEM110-MUSTN1A8MSY1 372 aa16.72■□□□□ 0.27
CTSD-201ENST00000236671 RPL21P46778 160 aaKnown RBP16.72■□□□□ 0.27
CTSD-201ENST00000236671 PEX5P50542 639 aa16.72■□□□□ 0.27
CTSD-201ENST00000236671 VAMP7P51809 220 aa16.72■□□□□ 0.27
CTSD-201ENST00000236671 GPC5P78333 572 aa16.72■□□□□ 0.27
CTSD-201ENST00000236671 ANKRD20A8PQ5CZ79 823 aa16.72■□□□□ 0.27
CTSD-201ENST00000236671 ZNF746Q6NUN9 644 aaPredicted RBP16.72■□□□□ 0.27
CTSD-201ENST00000236671 TMEM174Q8WUU8 243 aa16.72■□□□□ 0.27
CTSD-201ENST00000236671 RPS6KC1Q96S38 1066 aa16.72■□□□□ 0.27
CTSD-201ENST00000236671 PCDHB18PQ96TA0 734 aa16.72■□□□□ 0.27
CTSD-201ENST00000236671 PCIF1Q9H4Z3 704 aa16.72■□□□□ 0.27
CTSD-201ENST00000236671 LOXHD1Q8IVV2 1947 aa16.71■□□□□ 0.27
CTSD-201ENST00000236671 DNM1LO00429 736 aa16.71■□□□□ 0.27
CTSD-201ENST00000236671 P4HA2O15460 535 aa16.71■□□□□ 0.27
CTSD-201ENST00000236671 MTA2O94776 668 aa16.71■□□□□ 0.27
CTSD-201ENST00000236671 ALAS1P13196 640 aa16.71■□□□□ 0.27
CTSD-201ENST00000236671 MMP13P45452 471 aa16.71■□□□□ 0.27
CTSD-201ENST00000236671 GCLMP48507 274 aa16.71■□□□□ 0.27
CTSD-201ENST00000236671 CDR1P51861 262 aa16.71■□□□□ 0.27
CTSD-201ENST00000236671 UBAP2Q5T6F2 1119 aaKnown RBP16.71■□□□□ 0.27
CTSD-201ENST00000236671 GKAP1Q5VSY0 366 aaPredicted RBP16.71■□□□□ 0.27
CTSD-201ENST00000236671 PADI6Q6TGC4 694 aa16.71■□□□□ 0.27
CTSD-201ENST00000236671 CD101Q93033 1021 aa16.71■□□□□ 0.27
CTSD-201ENST00000236671 VTI1AQ96AJ9 217 aa16.71■□□□□ 0.27
CTSD-201ENST00000236671 CHMP6Q96FZ7 201 aa16.71■□□□□ 0.27
CTSD-201ENST00000236671 TMEM39BQ9GZU3 492 aa16.71■□□□□ 0.27
CTSD-201ENST00000236671 ADAM7Q9H2U9 754 aa16.71■□□□□ 0.27
CTSD-201ENST00000236671 EHMT1Q9H9B1 1298 aa16.71■□□□□ 0.27
CTSD-201ENST00000236671 ARHGEF10LQ9HCE6 1279 aa16.71■□□□□ 0.27
CTSD-201ENST00000236671 TMX2Q9Y320 296 aa16.71■□□□□ 0.27
CTSD-201ENST00000236671 CCDC169A6NNP5 214 aa16.7■□□□□ 0.26
CTSD-201ENST00000236671 IPO5O00410 1097 aaKnown RBP16.7■□□□□ 0.26
CTSD-201ENST00000236671 CHRNB2P17787 502 aa16.7■□□□□ 0.26
CTSD-201ENST00000236671 COMTP21964 271 aa16.7■□□□□ 0.26
CTSD-201ENST00000236671 GBP1P32455 592 aa16.7■□□□□ 0.26
CTSD-201ENST00000236671 SLC29A2Q14542 456 aa16.7■□□□□ 0.26
CTSD-201ENST00000236671 C12orf56Q8IXR9 622 aa16.7■□□□□ 0.26
CTSD-201ENST00000236671 KAT5Q92993 513 aa16.7■□□□□ 0.26
CTSD-201ENST00000236671 CBWD1Q9BRT8 395 aa16.7■□□□□ 0.26
CTSD-201ENST00000236671 SLC40A1Q9NP59 571 aa16.7■□□□□ 0.26
CTSD-201ENST00000236671 CHORDC1Q9UHD1 332 aaPredicted RBP16.7■□□□□ 0.26
CTSD-201ENST00000236671 NOCTQ9UK39 431 aaKnown RBP16.7■□□□□ 0.26
CTSD-201ENST00000236671 GOLGA6L7A0A1B0GV03 622 aa16.7■□□□□ 0.26
CTSD-201ENST00000236671 PODXLO00592 558 aa16.7■□□□□ 0.26
CTSD-201ENST00000236671 CTNND1O60716 968 aaKnown RBP16.7■□□□□ 0.26
CTSD-201ENST00000236671 RTN2O75298 545 aa16.7■□□□□ 0.26
CTSD-201ENST00000236671 GGPS1O95749 300 aa16.7■□□□□ 0.26
CTSD-201ENST00000236671 CHN1P15882 459 aa16.7■□□□□ 0.26
CTSD-201ENST00000236671 CETN1Q12798 172 aa16.7■□□□□ 0.26
CTSD-201ENST00000236671 SPDYE2Q495Y8 402 aa16.7■□□□□ 0.26
CTSD-201ENST00000236671 LACTB2Q53H82 288 aaPredicted RBP16.7■□□□□ 0.26
CTSD-201ENST00000236671 USP50Q70EL3 339 aaPredicted RBP16.7■□□□□ 0.26
CTSD-201ENST00000236671 CPLX4Q7Z7G2 160 aa16.7■□□□□ 0.26
CTSD-201ENST00000236671 ZSWIM2Q8NEG5 633 aa16.7■□□□□ 0.26
CTSD-201ENST00000236671 PLEKHO2Q8TD55 490 aa16.7■□□□□ 0.26
CTSD-201ENST00000236671 EPS8L1Q8TE68 723 aa16.7■□□□□ 0.26
CTSD-201ENST00000236671 ATXN2LQ8WWM7 1075 aaKnown RBP16.7■□□□□ 0.26
CTSD-201ENST00000236671 ZNF317Q96PQ6 595 aaPredicted RBP16.7■□□□□ 0.26
CTSD-201ENST00000236671 RIT2Q99578 217 aa16.7■□□□□ 0.26
CTSD-201ENST00000236671 SEMA4AQ9H3S1 761 aa16.7■□□□□ 0.26
CTSD-201ENST00000236671 AZI2Q9H6S1 392 aa16.7■□□□□ 0.26
CTSD-201ENST00000236671 TMEM206Q9H813 350 aa16.7■□□□□ 0.26
CTSD-201ENST00000236671 YY1AP1Q9H869 796 aa16.7■□□□□ 0.26
CTSD-201ENST00000236671 KLC4Q9NSK0 619 aa16.7■□□□□ 0.26
CTSD-201ENST00000236671 MRPL11Q9Y3B7 192 aaKnown RBP16.7■□□□□ 0.26
CTSD-201ENST00000236671 DDX39AO00148 427 aaKnown RBP16.69■□□□□ 0.26
CTSD-201ENST00000236671 SGPL1O95470 568 aa16.69■□□□□ 0.26
CTSD-201ENST00000236671 MAPTP10636 758 aaKnown RBP16.69■□□□□ 0.26
CTSD-201ENST00000236671 PYGMP11217 842 aa16.69■□□□□ 0.26
CTSD-201ENST00000236671 CYP1B1Q16678 543 aa16.69■□□□□ 0.26
CTSD-201ENST00000236671 CCDC137Q6PK04 289 aaKnown RBP16.69■□□□□ 0.26
CTSD-201ENST00000236671 MAEAQ7L5Y9 396 aa16.69■□□□□ 0.26
CTSD-201ENST00000236671 NOP9Q86U38 636 aaKnown RBP16.69■□□□□ 0.26
CTSD-201ENST00000236671 MTMR14Q8NCE2 650 aa16.69■□□□□ 0.26
CTSD-201ENST00000236671 CCDC114Q96M63 670 aa16.69■□□□□ 0.26
CTSD-201ENST00000236671 PARP2Q9UGN5 583 aa16.69■□□□□ 0.26
CTSD-201ENST00000236671 CNTNAP1P78357 1384 aa16.69■□□□□ 0.26
CTSD-201ENST00000236671 TCRBV7S2A1N4TA0A589 114 aa16.69■□□□□ 0.26
CTSD-201ENST00000236671 ATMINO43313 823 aaPredicted RBP16.69■□□□□ 0.26
CTSD-201ENST00000236671 MMEP08473 750 aa16.69■□□□□ 0.26
CTSD-201ENST00000236671 ALCAMQ13740 583 aa16.69■□□□□ 0.26
CTSD-201ENST00000236671 MESDQ14696 234 aa16.69■□□□□ 0.26
CTSD-201ENST00000236671 SEL1L2Q5TEA6 688 aa16.69■□□□□ 0.26
CTSD-201ENST00000236671 CPNE8Q86YQ8 564 aa16.69■□□□□ 0.26
CTSD-201ENST00000236671 FAM71AQ8IYT1 594 aa16.69■□□□□ 0.26
CTSD-201ENST00000236671 MORC4Q8TE76 937 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms