RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 POLR2EP19388 210 aaKnown RBP13.65□□□□□ -0.22
VAMP4-201ENST00000236192 PTPAQ15257 358 aa13.65□□□□□ -0.22
VAMP4-201ENST00000236192 FIGNQ5HY92 759 aa13.65□□□□□ -0.22
VAMP4-201ENST00000236192 PRPF39Q86UA1 669 aaKnown RBP13.65□□□□□ -0.22
VAMP4-201ENST00000236192 CAPSLQ8WWF8 208 aa13.65□□□□□ -0.22
VAMP4-201ENST00000236192 ALKBH8Q96BT7 664 aaKnown RBP13.65□□□□□ -0.22
VAMP4-201ENST00000236192 DACH2Q96NX9 599 aa13.65□□□□□ -0.22
VAMP4-201ENST00000236192 TBCCD1Q9NVR7 557 aa13.65□□□□□ -0.22
VAMP4-201ENST00000236192 SYBUQ9NX95 663 aa13.65□□□□□ -0.22
VAMP4-201ENST00000236192 KDM3AQ9Y4C1 1321 aa13.65□□□□□ -0.22
VAMP4-201ENST00000236192 ZSCAN9O15535 394 aaPredicted RBP13.64□□□□□ -0.23
VAMP4-201ENST00000236192 NR1H2P55055 460 aa13.64□□□□□ -0.23
VAMP4-201ENST00000236192 EFHC1Q5JVL4 640 aa13.64□□□□□ -0.23
VAMP4-201ENST00000236192 LVRNQ6Q4G3 990 aa13.64□□□□□ -0.23
VAMP4-201ENST00000236192 CEP19Q96LK0 163 aa13.64□□□□□ -0.23
VAMP4-201ENST00000236192 OSBPL10Q9BXB5 764 aa13.64□□□□□ -0.23
VAMP4-201ENST00000236192 PKD2L2Q9NZM6 624 aa13.64□□□□□ -0.23
VAMP4-201ENST00000236192 UMODL1Q5DID0 1318 aa13.64□□□□□ -0.23
VAMP4-201ENST00000236192 KLHL2O95198 593 aa13.64□□□□□ -0.23
VAMP4-201ENST00000236192 PGM3O95394 542 aa13.64□□□□□ -0.23
VAMP4-201ENST00000236192 ANXA13P27216 316 aa13.64□□□□□ -0.23
VAMP4-201ENST00000236192 CCNFP41002 786 aa13.64□□□□□ -0.23
VAMP4-201ENST00000236192 KLK7P49862 253 aa13.64□□□□□ -0.23
VAMP4-201ENST00000236192 MB21D2Q8IYB1 491 aaPredicted RBP13.64□□□□□ -0.23
VAMP4-201ENST00000236192 CKAP2Q8WWK9 683 aa13.64□□□□□ -0.23
VAMP4-201ENST00000236192 RFFLQ8WZ73 363 aa13.64□□□□□ -0.23
VAMP4-201ENST00000236192 SYN2Q92777 582 aaPredicted RBP13.64□□□□□ -0.23
VAMP4-201ENST00000236192 ING2Q9H160 280 aa13.64□□□□□ -0.23
VAMP4-201ENST00000236192 TRIM17Q9Y577 477 aa13.64□□□□□ -0.23
VAMP4-201ENST00000236192 PLEKP08567 350 aaPredicted RBP13.64□□□□□ -0.23
VAMP4-201ENST00000236192 CIITAP33076 1130 aa13.64□□□□□ -0.23
VAMP4-201ENST00000236192 NAA20P61599 178 aa13.64□□□□□ -0.23
VAMP4-201ENST00000236192 KRT17Q04695 432 aa13.64□□□□□ -0.23
VAMP4-201ENST00000236192 ADCK1Q86TW2 530 aa13.64□□□□□ -0.23
VAMP4-201ENST00000236192 UBE2OQ9C0C9 1292 aaKnown RBP13.64□□□□□ -0.23
VAMP4-201ENST00000236192 BRD8Q9H0E9 1235 aa13.64□□□□□ -0.23
VAMP4-201ENST00000236192 SNX25Q9H3E2 840 aa13.64□□□□□ -0.23
VAMP4-201ENST00000236192 FBXO9Q9UK97 447 aaPredicted RBP13.64□□□□□ -0.23
VAMP4-201ENST00000236192 APPL1Q9UKG1 709 aa13.64□□□□□ -0.23
VAMP4-201ENST00000236192 ZMYND8Q9ULU4 1186 aaPredicted RBP13.64□□□□□ -0.23
VAMP4-201ENST00000236192 THRAP3Q9Y2W1 955 aaKnown RBP13.64□□□□□ -0.23
VAMP4-201ENST00000236192 STARD13Q9Y3M8 1113 aa13.64□□□□□ -0.23
VAMP4-201ENST00000236192 MAD1L1Q9Y6D9 718 aa13.64□□□□□ -0.23
VAMP4-201ENST00000236192 NRXN1Q9ULB1 1477 aa13.64□□□□□ -0.23
VAMP4-201ENST00000236192 TBC1D12O60347 775 aa13.64□□□□□ -0.23
VAMP4-201ENST00000236192 ASLP04424 464 aa13.64□□□□□ -0.23
VAMP4-201ENST00000236192 NR2F2P24468 414 aa13.64□□□□□ -0.23
VAMP4-201ENST00000236192 PMS1P54277 932 aaKnown RBP13.64□□□□□ -0.23
VAMP4-201ENST00000236192 RTP1P59025 263 aa13.64□□□□□ -0.23
VAMP4-201ENST00000236192 METTL13Q8N6R0 699 aa13.64□□□□□ -0.23
VAMP4-201ENST00000236192 BORCS5Q969J3 196 aa13.64□□□□□ -0.23
VAMP4-201ENST00000236192 SYT15Q9BQS2 421 aa13.64□□□□□ -0.23
VAMP4-201ENST00000236192 TLR10Q9BXR5 811 aa13.64□□□□□ -0.23
VAMP4-201ENST00000236192 STK17AQ9UEE5 414 aa13.64□□□□□ -0.23
VAMP4-201ENST00000236192 RSL24D1Q9UHA3 163 aaKnown RBP13.64□□□□□ -0.23
VAMP4-201ENST00000236192 ZNF532Q9HCE3 1301 aa13.64□□□□□ -0.23
VAMP4-201ENST00000236192 SRGAP2CP0DJJ0 459 aa13.63□□□□□ -0.23
VAMP4-201ENST00000236192 TPBGLP0DKB5 382 aa13.63□□□□□ -0.23
VAMP4-201ENST00000236192 SRGAP2BP0DMP2 458 aa13.63□□□□□ -0.23
VAMP4-201ENST00000236192 TMEM132AQ24JP5 1023 aa13.63□□□□□ -0.23
VAMP4-201ENST00000236192 CATSPER3Q86XQ3 398 aa13.63□□□□□ -0.23
VAMP4-201ENST00000236192 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.63□□□□□ -0.23
VAMP4-201ENST00000236192 ETNK2Q9NVF9 386 aa13.63□□□□□ -0.23
VAMP4-201ENST00000236192 RABL2BQ9UNT1 228 aa13.63□□□□□ -0.23
VAMP4-201ENST00000236192 SGK1O00141 431 aa13.63□□□□□ -0.23
VAMP4-201ENST00000236192 ATF7P17544 494 aaPredicted RBP13.63□□□□□ -0.23
VAMP4-201ENST00000236192 CYP11B2P19099 503 aa13.63□□□□□ -0.23
VAMP4-201ENST00000236192 PLCG1P19174 1290 aa13.63□□□□□ -0.23
VAMP4-201ENST00000236192 LRRC41Q15345 812 aa13.63□□□□□ -0.23
VAMP4-201ENST00000236192 ANKRD40Q6AI12 368 aa13.63□□□□□ -0.23
VAMP4-201ENST00000236192 TMEM53Q6P2H8 277 aa13.63□□□□□ -0.23
VAMP4-201ENST00000236192 C4orf33Q8N1A6 199 aa13.63□□□□□ -0.23
VAMP4-201ENST00000236192 MIGA1Q8NAN2 632 aa13.63□□□□□ -0.23
VAMP4-201ENST00000236192 OR6Y1Q8NGX8 325 aa13.63□□□□□ -0.23
VAMP4-201ENST00000236192 ATP8B4Q8TF62 1192 aa13.63□□□□□ -0.23
VAMP4-201ENST00000236192 UCMAQ8WVF2 138 aa13.63□□□□□ -0.23
VAMP4-201ENST00000236192 MROH7Q68CQ1 1323 aa13.63□□□□□ -0.23
VAMP4-201ENST00000236192 TAF4O00268 1085 aa13.63□□□□□ -0.23
VAMP4-201ENST00000236192 KRT37O76014 449 aa13.63□□□□□ -0.23
VAMP4-201ENST00000236192 GCNT3O95395 438 aa13.63□□□□□ -0.23
VAMP4-201ENST00000236192 ANPEPP15144 967 aa13.63□□□□□ -0.23
VAMP4-201ENST00000236192 MMP13P45452 471 aa13.63□□□□□ -0.23
VAMP4-201ENST00000236192 KRT6CP48668 564 aa13.63□□□□□ -0.23
VAMP4-201ENST00000236192 HPCAP84074 193 aa13.63□□□□□ -0.23
VAMP4-201ENST00000236192 BEGAINQ9BUH8 593 aa13.63□□□□□ -0.23
VAMP4-201ENST00000236192 RNF103-CHMP3A0A140T963 221 aa13.63□□□□□ -0.23
VAMP4-201ENST00000236192 SFI1A8K8P3 1242 aa13.63□□□□□ -0.23
VAMP4-201ENST00000236192 SHBGP04278 402 aa13.63□□□□□ -0.23
VAMP4-201ENST00000236192 DDB1Q16531 1140 aa13.63□□□□□ -0.23
VAMP4-201ENST00000236192 NET1Q7Z628 596 aaPredicted RBP13.63□□□□□ -0.23
VAMP4-201ENST00000236192 ZNF333Q96JL9 665 aa13.63□□□□□ -0.23
VAMP4-201ENST00000236192 WNT8AQ9H1J5 351 aa13.63□□□□□ -0.23
VAMP4-201ENST00000236192 GCNT4Q9P109 453 aa13.63□□□□□ -0.23
VAMP4-201ENST00000236192 TAGLN3Q9UI15 199 aa13.63□□□□□ -0.23
VAMP4-201ENST00000236192 TMEM247A6NEH6 219 aa13.62□□□□□ -0.23
VAMP4-201ENST00000236192 KRT6AP02538 564 aa13.62□□□□□ -0.23
VAMP4-201ENST00000236192 KRT6BP04259 564 aa13.62□□□□□ -0.23
VAMP4-201ENST00000236192 SARSP49591 514 aaKnown RBP13.62□□□□□ -0.23
VAMP4-201ENST00000236192 ACADVLP49748 655 aa13.62□□□□□ -0.23
VAMP4-201ENST00000236192 ST13P50502 369 aaKnown RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms