RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 TSKSQ9UJT2 592 aa12.67□□□□□ -0.38
TNFAIP1-201ENST00000226225 SNAI1O95863 264 aaPredicted RBP12.67□□□□□ -0.38
TNFAIP1-201ENST00000226225 INSRRP14616 1297 aa12.67□□□□□ -0.38
TNFAIP1-201ENST00000226225 FCGRTP55899 365 aa12.67□□□□□ -0.38
TNFAIP1-201ENST00000226225 POLR2FP61218 127 aaKnown RBP12.67□□□□□ -0.38
TNFAIP1-201ENST00000226225 KIF5AQ12840 1032 aa12.67□□□□□ -0.38
TNFAIP1-201ENST00000226225 DRP2Q13474 957 aa12.67□□□□□ -0.38
TNFAIP1-201ENST00000226225 PPP4R3CPQ6ZMV5 832 aa12.67□□□□□ -0.38
TNFAIP1-201ENST00000226225 FGD4Q96M96 766 aa12.67□□□□□ -0.38
TNFAIP1-201ENST00000226225 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.67□□□□□ -0.38
TNFAIP1-201ENST00000226225 HSF2BPO75031 334 aa12.66□□□□□ -0.38
TNFAIP1-201ENST00000226225 PPP2R5AQ15172 486 aa12.66□□□□□ -0.38
TNFAIP1-201ENST00000226225 SEZ6Q53EL9 994 aa12.66□□□□□ -0.38
TNFAIP1-201ENST00000226225 MAATS1Q7Z4T9 603 aa12.66□□□□□ -0.38
TNFAIP1-201ENST00000226225 BSNDQ8WZ55 320 aa12.66□□□□□ -0.38
TNFAIP1-201ENST00000226225 BEGAINQ9BUH8 593 aa12.66□□□□□ -0.38
TNFAIP1-201ENST00000226225 NHEJ1Q9H9Q4 299 aaPredicted RBP12.66□□□□□ -0.38
TNFAIP1-201ENST00000226225 SUCLA2Q9P2R7 463 aaPredicted RBP12.66□□□□□ -0.38
TNFAIP1-201ENST00000226225 CA12O43570 354 aa12.66□□□□□ -0.38
TNFAIP1-201ENST00000226225 LYPLA2O95372 231 aa12.66□□□□□ -0.38
TNFAIP1-201ENST00000226225 LGALS2P05162 132 aa12.66□□□□□ -0.38
TNFAIP1-201ENST00000226225 SMPD1P17405 629 aa12.66□□□□□ -0.38
TNFAIP1-201ENST00000226225 ATP4AP20648 1035 aa12.66□□□□□ -0.38
TNFAIP1-201ENST00000226225 TMOD1P28289 359 aa12.66□□□□□ -0.38
TNFAIP1-201ENST00000226225 CKAP4Q07065 602 aaKnown RBP12.66□□□□□ -0.38
TNFAIP1-201ENST00000226225 MAPK7Q13164 816 aa12.66□□□□□ -0.38
TNFAIP1-201ENST00000226225 TUBB2AQ13885 445 aa12.66□□□□□ -0.38
TNFAIP1-201ENST00000226225 GRB14Q14449 540 aa12.66□□□□□ -0.38
TNFAIP1-201ENST00000226225 ZBTB8OSQ8IWT0 167 aa12.66□□□□□ -0.38
TNFAIP1-201ENST00000226225 RETREG2Q8NC44 543 aa12.66□□□□□ -0.38
TNFAIP1-201ENST00000226225 ZNF507Q8TCN5 953 aa12.66□□□□□ -0.38
TNFAIP1-201ENST00000226225 CCDC42Q96M95 316 aa12.66□□□□□ -0.38
TNFAIP1-201ENST00000226225 CEP63Q96MT8 703 aa12.66□□□□□ -0.38
TNFAIP1-201ENST00000226225 FNBP1Q96RU3 617 aa12.66□□□□□ -0.38
TNFAIP1-201ENST00000226225 TUBB2BQ9BVA1 445 aa12.66□□□□□ -0.38
TNFAIP1-201ENST00000226225 KCTD10Q9H3F6 313 aa12.66□□□□□ -0.38
TNFAIP1-201ENST00000226225 PCDHA2Q9Y5H9 948 aa12.66□□□□□ -0.38
TNFAIP1-201ENST00000226225 KLRC1P26715 233 aa12.66□□□□□ -0.38
TNFAIP1-201ENST00000226225 RDXP35241 583 aaKnown RBP12.66□□□□□ -0.38
TNFAIP1-201ENST00000226225 EHHADHQ08426 723 aa12.66□□□□□ -0.38
TNFAIP1-201ENST00000226225 CETN1Q12798 172 aa12.66□□□□□ -0.38
TNFAIP1-201ENST00000226225 IFT88Q13099 833 aa12.66□□□□□ -0.38
TNFAIP1-201ENST00000226225 PPFIA1Q13136 1202 aa12.66□□□□□ -0.38
TNFAIP1-201ENST00000226225 SPA17Q15506 151 aa12.66□□□□□ -0.38
TNFAIP1-201ENST00000226225 GNASQ5JWF2 1037 aa12.66□□□□□ -0.38
TNFAIP1-201ENST00000226225 ATP8B4Q8TF62 1192 aa12.66□□□□□ -0.38
TNFAIP1-201ENST00000226225 NLRP7Q8WX94 980 aa12.66□□□□□ -0.38
TNFAIP1-201ENST00000226225 CCDC51Q96ER9 411 aa12.66□□□□□ -0.38
TNFAIP1-201ENST00000226225 FAM213AQ9BRX8 229 aa12.66□□□□□ -0.38
TNFAIP1-201ENST00000226225 SPC25Q9HBM1 224 aa12.66□□□□□ -0.38
TNFAIP1-201ENST00000226225 TBX20Q9UMR3 447 aa12.66□□□□□ -0.38
TNFAIP1-201ENST00000226225 CAPN6Q9Y6Q1 641 aa12.66□□□□□ -0.38
TNFAIP1-201ENST00000226225 SCN4AP35499 1836 aa12.65□□□□□ -0.38
TNFAIP1-201ENST00000226225 TNNI1P19237 187 aa12.65□□□□□ -0.38
TNFAIP1-201ENST00000226225 BIRC3Q13489 604 aa12.65□□□□□ -0.38
TNFAIP1-201ENST00000226225 DGKDQ16760 1214 aa12.65□□□□□ -0.38
TNFAIP1-201ENST00000226225 EXOC3L4Q17RC7 722 aa12.65□□□□□ -0.38
TNFAIP1-201ENST00000226225 GBP6Q6ZN66 633 aa12.65□□□□□ -0.38
TNFAIP1-201ENST00000226225 LRRC55Q6ZSA7 311 aa12.65□□□□□ -0.38
TNFAIP1-201ENST00000226225 TARS2Q9BW92 718 aaKnown RBP12.65□□□□□ -0.38
TNFAIP1-201ENST00000226225 METTL14Q9HCE5 456 aaKnown RBP12.65□□□□□ -0.38
TNFAIP1-201ENST00000226225 XPNPEP1Q9NQW7 623 aa12.65□□□□□ -0.38
TNFAIP1-201ENST00000226225 MAFBQ9Y5Q3 323 aaPredicted RBP12.65□□□□□ -0.38
TNFAIP1-201ENST00000226225 EIF3HO15372 352 aaKnown RBP eCLIP12.65□□□□□ -0.38
TNFAIP1-201ENST00000226225 TGFB1I1O43294 461 aa12.65□□□□□ -0.38
TNFAIP1-201ENST00000226225 AFPP02771 609 aaKnown RBP12.65□□□□□ -0.38
TNFAIP1-201ENST00000226225 ELNP15502 786 aa12.65□□□□□ -0.38
TNFAIP1-201ENST00000226225 MCM3P25205 808 aa12.65□□□□□ -0.38
TNFAIP1-201ENST00000226225 GCLMP48507 274 aa12.65□□□□□ -0.38
TNFAIP1-201ENST00000226225 ACOT2P49753 483 aa12.65□□□□□ -0.38
TNFAIP1-201ENST00000226225 EDRF1Q3B7T1 1238 aa12.65□□□□□ -0.38
TNFAIP1-201ENST00000226225 LMBRD2Q68DH5 695 aaPredicted RBP12.65□□□□□ -0.38
TNFAIP1-201ENST00000226225 WDR59Q6PJI9 974 aa12.65□□□□□ -0.38
TNFAIP1-201ENST00000226225 ABRAQ8N0Z2 381 aa12.65□□□□□ -0.38
TNFAIP1-201ENST00000226225 XXYLT1Q8NBI6 393 aa12.65□□□□□ -0.38
TNFAIP1-201ENST00000226225 GIMAP7Q8NHV1 300 aa12.65□□□□□ -0.38
TNFAIP1-201ENST00000226225 PCYT2Q99447 389 aa12.65□□□□□ -0.38
TNFAIP1-201ENST00000226225 SETD4Q9NVD3 440 aa12.65□□□□□ -0.38
TNFAIP1-201ENST00000226225 EIF3DO15371 548 aaKnown RBP eCLIP12.64□□□□□ -0.39
TNFAIP1-201ENST00000226225 AKR1B10O60218 316 aa12.64□□□□□ -0.39
TNFAIP1-201ENST00000226225 HBP1O60381 514 aa12.64□□□□□ -0.39
TNFAIP1-201ENST00000226225 VTNP04004 478 aa12.64□□□□□ -0.39
TNFAIP1-201ENST00000226225 CYLC1P35663 651 aaPredicted RBP12.64□□□□□ -0.39
TNFAIP1-201ENST00000226225 NNTQ13423 1086 aa12.64□□□□□ -0.39
TNFAIP1-201ENST00000226225 ARHGAP44Q17R89 818 aa12.64□□□□□ -0.39
TNFAIP1-201ENST00000226225 MFSD14CQ5VZR4 134 aa12.64□□□□□ -0.39
TNFAIP1-201ENST00000226225 TLK2Q86UE8 772 aa12.64□□□□□ -0.39
TNFAIP1-201ENST00000226225 ASAP3Q8TDY4 903 aa12.64□□□□□ -0.39
TNFAIP1-201ENST00000226225 HSPBP1Q9NZL4 362 aa12.64□□□□□ -0.39
TNFAIP1-201ENST00000226225 NFU1Q9UMS0 254 aa12.64□□□□□ -0.39
TNFAIP1-201ENST00000226225 KRT83P78385 493 aa12.64□□□□□ -0.39
TNFAIP1-201ENST00000226225 PLCB4Q15147 1175 aa12.64□□□□□ -0.39
TNFAIP1-201ENST00000226225 E2F5Q15329 346 aa12.64□□□□□ -0.39
TNFAIP1-201ENST00000226225 TTMPQ5BVD1 217 aa12.64□□□□□ -0.39
TNFAIP1-201ENST00000226225 CCDC62Q6P9F0 684 aa12.64□□□□□ -0.39
TNFAIP1-201ENST00000226225 THNSL1Q8IYQ7 743 aa12.64□□□□□ -0.39
TNFAIP1-201ENST00000226225 PACSIN2Q9UNF0 486 aaPredicted RBP12.64□□□□□ -0.39
TNFAIP1-201ENST00000226225 ALDH1A1P00352 501 aa12.64□□□□□ -0.39
TNFAIP1-201ENST00000226225 PGK1P00558 417 aa12.64□□□□□ -0.39
TNFAIP1-201ENST00000226225 ACTN1P12814 892 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms