RNA–Protein interactions for RNA: ENST00000225983.10

HDAC5-201, Transcript of histone deacetylase 5, humanhuman

APPRIS P3 TSL 5 BASIC

Gene HDAC5, Length 5,326 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-201ENST00000225983 TAF1BQ53T94 588 aaPredicted RBP17.17■□□□□ 0.34
HDAC5-201ENST00000225983 TMTC4Q5T4D3 741 aa17.17■□□□□ 0.34
HDAC5-201ENST00000225983 EP400NLQ6ZTU2 488 aa17.17■□□□□ 0.34
HDAC5-201ENST00000225983 BEST2Q8NFU1 509 aa17.17■□□□□ 0.34
HDAC5-201ENST00000225983 TMEM143Q96AN5 459 aa17.17■□□□□ 0.34
HDAC5-201ENST00000225983 ABCF3Q9NUQ8 709 aa17.17■□□□□ 0.34
HDAC5-201ENST00000225983 CIITAP33076 1130 aa17.17■□□□□ 0.34
HDAC5-201ENST00000225983 BCAR1P56945 870 aa17.17■□□□□ 0.34
HDAC5-201ENST00000225983 ROR1Q01973 937 aa17.17■□□□□ 0.34
HDAC5-201ENST00000225983 MMS22LQ6ZRQ5 1243 aa17.17■□□□□ 0.34
HDAC5-201ENST00000225983 PIP4K2CQ8TBX8 421 aa17.17■□□□□ 0.34
HDAC5-201ENST00000225983 CYP26B1Q9NR63 512 aa17.17■□□□□ 0.34
HDAC5-201ENST00000225983 SCOCQ9UIL1 159 aa17.17■□□□□ 0.34
HDAC5-201ENST00000225983 SYCP2LQ5T4T6 812 aa17.16■□□□□ 0.34
HDAC5-201ENST00000225983 STRIP1Q5VSL9 837 aa17.16■□□□□ 0.34
HDAC5-201ENST00000225983 RNF149Q8NC42 400 aa17.16■□□□□ 0.34
HDAC5-201ENST00000225983 NOA1Q8NC60 698 aaKnown RBP17.16■□□□□ 0.34
HDAC5-201ENST00000225983 NYAP2Q9P242 653 aa17.16■□□□□ 0.34
HDAC5-201ENST00000225983 OCRLQ01968 901 aa17.16■□□□□ 0.34
HDAC5-201ENST00000225983 TROAPQ12815 778 aa17.16■□□□□ 0.34
HDAC5-201ENST00000225983 CCNI2Q6ZMN8 369 aaPredicted RBP17.16■□□□□ 0.34
HDAC5-201ENST00000225983 SLC13A1Q9BZW2 595 aa17.16■□□□□ 0.34
HDAC5-201ENST00000225983 LCMT1Q9UIC8 334 aa17.16■□□□□ 0.34
HDAC5-201ENST00000225983 GGPS1O95749 300 aa17.16■□□□□ 0.34
HDAC5-201ENST00000225983 DUOXA2Q1HG44 320 aa17.16■□□□□ 0.34
HDAC5-201ENST00000225983 GRAMD1BQ3KR37 738 aa17.16■□□□□ 0.34
HDAC5-201ENST00000225983 KIAA1755Q5JYT7 1200 aa17.16■□□□□ 0.34
HDAC5-201ENST00000225983 TRIM72Q6ZMU5 477 aa17.16■□□□□ 0.34
HDAC5-201ENST00000225983 GOLPH3Q9H4A6 298 aa17.16■□□□□ 0.34
HDAC5-201ENST00000225983 ADAMTS13Q76LX8 1427 aa17.16■□□□□ 0.34
HDAC5-201ENST00000225983 HEATR6Q6AI08 1181 aaKnown RBP17.16■□□□□ 0.34
HDAC5-201ENST00000225983 KLC3Q6P597 504 aa17.16■□□□□ 0.34
HDAC5-201ENST00000225983 RPAINQ86UA6 219 aa17.16■□□□□ 0.34
HDAC5-201ENST00000225983 ANKMY2Q8IV38 441 aa17.16■□□□□ 0.34
HDAC5-201ENST00000225983 OR2W6PQ8NHA6 318 aa17.16■□□□□ 0.34
HDAC5-201ENST00000225983 KCNB2Q92953 911 aa17.16■□□□□ 0.34
HDAC5-201ENST00000225983 DHX35Q9H5Z1 703 aaKnown RBP17.16■□□□□ 0.34
HDAC5-201ENST00000225983 NOP53Q9NZM5 478 aaKnown RBP17.16■□□□□ 0.34
HDAC5-201ENST00000225983 SCAF8Q9UPN6 1271 aaKnown RBP17.16■□□□□ 0.34
HDAC5-201ENST00000225983 CDH6P55285 790 aa17.15■□□□□ 0.34
HDAC5-201ENST00000225983 NOP14P78316 857 aaKnown RBP17.15■□□□□ 0.34
HDAC5-201ENST00000225983 ACTN3Q08043 901 aaPredicted RBP17.15■□□□□ 0.34
HDAC5-201ENST00000225983 NME3Q13232 169 aa17.15■□□□□ 0.34
HDAC5-201ENST00000225983 BAATQ14032 418 aaPredicted RBP17.15■□□□□ 0.34
HDAC5-201ENST00000225983 SMYD3Q9H7B4 428 aa17.15■□□□□ 0.34
HDAC5-201ENST00000225983 DDX56Q9NY93 547 aaKnown RBP17.15■□□□□ 0.34
HDAC5-201ENST00000225983 FAF1Q9UNN5 650 aaPredicted RBP17.15■□□□□ 0.34
HDAC5-201ENST00000225983 APOBEC2Q9Y235 224 aaKnown RBP17.15■□□□□ 0.34
HDAC5-201ENST00000225983 ARHGEF37A1IGU5 675 aa17.15■□□□□ 0.34
HDAC5-201ENST00000225983 CD44P16070 742 aaKnown RBP17.15■□□□□ 0.34
HDAC5-201ENST00000225983 AP1B1Q10567 949 aa17.15■□□□□ 0.34
HDAC5-201ENST00000225983 NYAP1Q6ZVC0 841 aa17.15■□□□□ 0.34
HDAC5-201ENST00000225983 SCN4BQ8IWT1 228 aa17.15■□□□□ 0.34
HDAC5-201ENST00000225983 LRRC37BQ96QE4 947 aa17.15■□□□□ 0.34
HDAC5-201ENST00000225983 MMP19Q99542 508 aa17.15■□□□□ 0.34
HDAC5-201ENST00000225983 MAP3K14Q99558 947 aa17.15■□□□□ 0.34
HDAC5-201ENST00000225983 GGT7Q9UJ14 662 aa17.15■□□□□ 0.34
HDAC5-201ENST00000225983 ZBTB12Q9Y330 459 aaPredicted RBP17.15■□□□□ 0.34
HDAC5-201ENST00000225983 PLA2G4FQ68DD2 849 aa17.15■□□□□ 0.34
HDAC5-201ENST00000225983 EFHD1Q9BUP0 239 aa17.15■□□□□ 0.34
HDAC5-201ENST00000225983 PSMD14O00487 310 aa17.15■□□□□ 0.34
HDAC5-201ENST00000225983 KCNV2Q8TDN2 545 aa17.15■□□□□ 0.34
HDAC5-201ENST00000225983 VPS39Q96JC1 886 aa17.15■□□□□ 0.34
HDAC5-201ENST00000225983 A8MXQ7 604 aa17.14■□□□□ 0.33
HDAC5-201ENST00000225983 SNRNP35Q16560 246 aaKnown RBP17.14■□□□□ 0.33
HDAC5-201ENST00000225983 FSD1LQ9BXM9 530 aa17.14■□□□□ 0.33
HDAC5-201ENST00000225983 ALG13Q9NP73 1137 aaKnown RBP17.14■□□□□ 0.33
HDAC5-201ENST00000225983 TBX3O15119 743 aa17.14■□□□□ 0.33
HDAC5-201ENST00000225983 HAUS5O94927 633 aa17.14■□□□□ 0.33
HDAC5-201ENST00000225983 NAB2Q15742 525 aa17.14■□□□□ 0.33
HDAC5-201ENST00000225983 SERPINI1Q99574 410 aa17.14■□□□□ 0.33
HDAC5-201ENST00000225983 SPATA31A1Q5TZJ5 1347 aa17.14■□□□□ 0.33
HDAC5-201ENST00000225983 CD163L1Q9NR16 1453 aa17.14■□□□□ 0.33
HDAC5-201ENST00000225983 SPDYE2BA6NHP3 402 aa17.14■□□□□ 0.33
HDAC5-201ENST00000225983 GSTA4O15217 222 aa17.14■□□□□ 0.33
HDAC5-201ENST00000225983 NVLO15381 856 aaKnown RBP17.14■□□□□ 0.33
HDAC5-201ENST00000225983 SLC37A4O43826 429 aa17.14■□□□□ 0.33
HDAC5-201ENST00000225983 SPDYE6P0CI01 402 aa17.14■□□□□ 0.33
HDAC5-201ENST00000225983 GJB7Q6PEY0 223 aa17.14■□□□□ 0.33
HDAC5-201ENST00000225983 APOBEC3FQ8IUX4 373 aaKnown RBP17.14■□□□□ 0.33
HDAC5-201ENST00000225983 TEX2Q8IWB9 1127 aa17.14■□□□□ 0.33
HDAC5-201ENST00000225983 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.14■□□□□ 0.333e-6■■■■■ 36.3
HDAC5-201ENST00000225983 PRMT1Q99873 361 aaKnown RBP17.14■□□□□ 0.33
HDAC5-201ENST00000225983 ECT2Q9H8V3 914 aa17.14■□□□□ 0.33
HDAC5-201ENST00000225983 HPCAL4Q9UM19 191 aa17.14■□□□□ 0.33
HDAC5-201ENST00000225983 ATMINO43313 823 aaPredicted RBP17.14■□□□□ 0.33
HDAC5-201ENST00000225983 PLEKP08567 350 aaPredicted RBP17.14■□□□□ 0.33
HDAC5-201ENST00000225983 STAT5BP51692 787 aa17.14■□□□□ 0.33
HDAC5-201ENST00000225983 YWHAHQ04917 246 aaPredicted RBP17.14■□□□□ 0.33
HDAC5-201ENST00000225983 WDR72Q3MJ13 1102 aa17.14■□□□□ 0.33
HDAC5-201ENST00000225983 HABP4Q5JVS0 413 aaKnown RBP17.14■□□□□ 0.33
HDAC5-201ENST00000225983 ATP11CQ8NB49 1132 aa17.14■□□□□ 0.33
HDAC5-201ENST00000225983 DHX38Q92620 1227 aaKnown RBP17.14■□□□□ 0.33
HDAC5-201ENST00000225983 KIF12Q96FN5 646 aa17.14■□□□□ 0.33
HDAC5-201ENST00000225983 ANLNQ9NQW6 1124 aa17.14■□□□□ 0.33
HDAC5-201ENST00000225983 IQGAP1P46940 1657 aa17.14■□□□□ 0.33
HDAC5-201ENST00000225983 RAD51CO43502 376 aa17.13■□□□□ 0.33
HDAC5-201ENST00000225983 EDRF1Q3B7T1 1238 aa17.13■□□□□ 0.33
HDAC5-201ENST00000225983 NCAPGQ9BPX3 1015 aa17.13■□□□□ 0.33
HDAC5-201ENST00000225983 HAUS8Q9BT25 410 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms