RNA–Protein interactions for RNA: ENST00000225726.9

CCDC47-201, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC47, Length 3,466 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-201ENST00000225726 SMC1BQ8NDV3 1235 aa16.14■□□□□ 0.17
CCDC47-201ENST00000225726 MSTO1Q9BUK6 570 aa16.14■□□□□ 0.17
CCDC47-201ENST00000225726 FLRT1Q9NZU1 646 aa16.14■□□□□ 0.17
CCDC47-201ENST00000225726 PJA2O43164 708 aa16.13■□□□□ 0.17
CCDC47-201ENST00000225726 MSCO60682 206 aa16.13■□□□□ 0.17
CCDC47-201ENST00000225726 PRKCBP05771 671 aa16.13■□□□□ 0.17
CCDC47-201ENST00000225726 MATR3P43243 847 aaKnown RBP eCLIP16.13■□□□□ 0.17
CCDC47-201ENST00000225726 TM4SF4P48230 202 aa16.13■□□□□ 0.17
CCDC47-201ENST00000225726 PHLDB3Q6NSJ2 640 aa16.13■□□□□ 0.17
CCDC47-201ENST00000225726 METTL13Q8N6R0 699 aa16.13■□□□□ 0.17
CCDC47-201ENST00000225726 LINC01465Q8N7H1 131 aa16.13■□□□□ 0.17
CCDC47-201ENST00000225726 ZBTB45Q96K62 511 aaPredicted RBP16.13■□□□□ 0.17
CCDC47-201ENST00000225726 TFR2Q9UP52 801 aa16.13■□□□□ 0.17
CCDC47-201ENST00000225726 H3BRB1 525 aa16.13■□□□□ 0.17
CCDC47-201ENST00000225726 CLCN3P51790 818 aa16.13■□□□□ 0.17
CCDC47-201ENST00000225726 IGBP1P78318 339 aa16.13■□□□□ 0.17
CCDC47-201ENST00000225726 MAP2K1Q02750 393 aaPredicted RBP16.13■□□□□ 0.17
CCDC47-201ENST00000225726 CRHR2Q13324 411 aa16.13■□□□□ 0.17
CCDC47-201ENST00000225726 MAPK6Q16659 721 aa16.13■□□□□ 0.17
CCDC47-201ENST00000225726 APBA2Q99767 749 aa16.13■□□□□ 0.17
CCDC47-201ENST00000225726 GPR88Q9GZN0 384 aa16.13■□□□□ 0.17
CCDC47-201ENST00000225726 TUT1Q9H6E5 874 aaKnown RBP16.13■□□□□ 0.17
CCDC47-201ENST00000225726 ANKFY1Q9P2R3 1169 aa16.13■□□□□ 0.17
CCDC47-201ENST00000225726 ADCY6O43306 1168 aa16.13■□□□□ 0.17
CCDC47-201ENST00000225726 SLU7O95391 586 aaKnown RBP16.13■□□□□ 0.17
CCDC47-201ENST00000225726 NLRP11P59045 1033 aaKnown RBP16.13■□□□□ 0.17
CCDC47-201ENST00000225726 CLDN10P78369 228 aa16.13■□□□□ 0.17
CCDC47-201ENST00000225726 PTK2Q05397 1052 aa16.13■□□□□ 0.17
CCDC47-201ENST00000225726 ZNF571Q7Z3V5 609 aaPredicted RBP16.13■□□□□ 0.17
CCDC47-201ENST00000225726 GPBP1L1Q9HC44 474 aaPredicted RBP16.13■□□□□ 0.17
CCDC47-201ENST00000225726 CTAGE9A4FU28 777 aa16.12■□□□□ 0.17
CCDC47-201ENST00000225726 ECM2O94769 699 aaPredicted RBP16.12■□□□□ 0.17
CCDC47-201ENST00000225726 CCDC172P0C7W6 258 aa16.12■□□□□ 0.17
CCDC47-201ENST00000225726 KLRC1P26715 233 aa16.12■□□□□ 0.17
CCDC47-201ENST00000225726 POU5F1BQ06416 359 aa16.12■□□□□ 0.17
CCDC47-201ENST00000225726 ENOX2Q16206 610 aaKnown RBP16.12■□□□□ 0.17
CCDC47-201ENST00000225726 CRELD2Q6UXH1 353 aaPredicted RBP16.12■□□□□ 0.17
CCDC47-201ENST00000225726 POP1Q99575 1024 aaKnown RBP16.12■□□□□ 0.17
CCDC47-201ENST00000225726 NAPGQ99747 312 aaPredicted RBP16.12■□□□□ 0.17
CCDC47-201ENST00000225726 ACO2Q99798 780 aaKnown RBP16.12■□□□□ 0.17
CCDC47-201ENST00000225726 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.12■□□□□ 0.17
CCDC47-201ENST00000225726 NFKBIZQ9BYH8 718 aa16.12■□□□□ 0.17
CCDC47-201ENST00000225726 TOPORSQ9NS56 1045 aaPredicted RBP16.12■□□□□ 0.17
CCDC47-201ENST00000225726 GNEQ9Y223 722 aaKnown RBP16.12■□□□□ 0.17
CCDC47-201ENST00000225726 GFPT2O94808 682 aa16.12■□□□□ 0.17
CCDC47-201ENST00000225726 ZNF865P0CJ78 1059 aaPredicted RBP16.12■□□□□ 0.17
CCDC47-201ENST00000225726 GPC3P51654 580 aa16.12■□□□□ 0.17
CCDC47-201ENST00000225726 ARHGEF19Q8IW93 802 aa16.12■□□□□ 0.17
CCDC47-201ENST00000225726 GJD2Q9UKL4 321 aa16.12■□□□□ 0.17
CCDC47-201ENST00000225726 DOCK3Q8IZD9 2030 aa16.12■□□□□ 0.17
CCDC47-201ENST00000225726 TOM1L1O75674 476 aa16.11■□□□□ 0.17
CCDC47-201ENST00000225726 DLATP10515 647 aaKnown RBP16.11■□□□□ 0.17
CCDC47-201ENST00000225726 PTENP60484 403 aa16.11■□□□□ 0.17
CCDC47-201ENST00000225726 PRAMEF19Q5SWL8 479 aa16.11■□□□□ 0.17
CCDC47-201ENST00000225726 C10orf76Q5T2E6 689 aa16.11■□□□□ 0.17
CCDC47-201ENST00000225726 VPS36Q86VN1 386 aa16.11■□□□□ 0.17
CCDC47-201ENST00000225726 FBXL13Q8NEE6 735 aa16.11■□□□□ 0.17
CCDC47-201ENST00000225726 NLRP4Q96MN2 994 aa16.11■□□□□ 0.17
CCDC47-201ENST00000225726 UBE2TQ9NPD8 197 aaPredicted RBP16.11■□□□□ 0.17
CCDC47-201ENST00000225726 MGAMO43451 1857 aa16.11■□□□□ 0.17
CCDC47-201ENST00000225726 TMEM88BA6NKF7 163 aa16.11■□□□□ 0.17
CCDC47-201ENST00000225726 TNPO2O14787 897 aaKnown RBP16.11■□□□□ 0.17
CCDC47-201ENST00000225726 EVI5O60447 810 aa16.11■□□□□ 0.17
CCDC47-201ENST00000225726 TUBB2AQ13885 445 aa16.11■□□□□ 0.17
CCDC47-201ENST00000225726 SECISBP2LQ93073 1101 aaKnown RBP16.11■□□□□ 0.17
CCDC47-201ENST00000225726 FNBP1Q96RU3 617 aa16.11■□□□□ 0.17
CCDC47-201ENST00000225726 TUBB2BQ9BVA1 445 aa16.11■□□□□ 0.17
CCDC47-201ENST00000225726 FZD8Q9H461 694 aa16.11■□□□□ 0.17
CCDC47-201ENST00000225726 A0A087X0T9 212 aa16.11■□□□□ 0.17
CCDC47-201ENST00000225726 CLDN3O15551 220 aa16.11■□□□□ 0.17
CCDC47-201ENST00000225726 CA12O43570 354 aa16.11■□□□□ 0.17
CCDC47-201ENST00000225726 FAM228BP0C875 321 aa16.11■□□□□ 0.17
CCDC47-201ENST00000225726 CYP2B6P20813 491 aa16.11■□□□□ 0.17
CCDC47-201ENST00000225726 ACOT2P49753 483 aa16.11■□□□□ 0.17
CCDC47-201ENST00000225726 CCL14Q16627 93 aa16.11■□□□□ 0.17
CCDC47-201ENST00000225726 MTHFD1LQ6UB35 978 aa16.11■□□□□ 0.17
CCDC47-201ENST00000225726 SEMA4DQ92854 862 aa16.11■□□□□ 0.17
CCDC47-201ENST00000225726 ZBTB10Q96DT7 871 aa16.11■□□□□ 0.17
CCDC47-201ENST00000225726 RBAKQ9NYW8 714 aaPredicted RBP16.11■□□□□ 0.17
CCDC47-201ENST00000225726 ADAMTS1Q9UHI8 967 aa16.11■□□□□ 0.17
CCDC47-201ENST00000225726 MRFAP1Q9Y605 127 aa16.11■□□□□ 0.17
CCDC47-201ENST00000225726 A6NJR5 290 aa16.1■□□□□ 0.17
CCDC47-201ENST00000225726 IGHA2P01877 340 aa16.1■□□□□ 0.17
CCDC47-201ENST00000225726 GJB1P08034 283 aa16.1■□□□□ 0.17
CCDC47-201ENST00000225726 TMOD1P28289 359 aa16.1■□□□□ 0.17
CCDC47-201ENST00000225726 PHKA2P46019 1235 aa16.1■□□□□ 0.17
CCDC47-201ENST00000225726 PPFIA1Q13136 1202 aa16.1■□□□□ 0.17
CCDC47-201ENST00000225726 ARHGAP44Q17R89 818 aa16.1■□□□□ 0.17
CCDC47-201ENST00000225726 C15orf39Q6ZRI6 1047 aa16.1■□□□□ 0.17
CCDC47-201ENST00000225726 SV2AQ7L0J3 742 aa16.1■□□□□ 0.17
CCDC47-201ENST00000225726 ERO1AQ96HE7 468 aa16.1■□□□□ 0.17
CCDC47-201ENST00000225726 RAB20Q9NX57 234 aa16.1■□□□□ 0.17
CCDC47-201ENST00000225726 ATP8B3O60423 1300 aa16.1■□□□□ 0.17
CCDC47-201ENST00000225726 ACKR2O00590 384 aa16.1■□□□□ 0.17
CCDC47-201ENST00000225726 KIF3CO14782 793 aa16.1■□□□□ 0.17
CCDC47-201ENST00000225726 DYNC1LI2O43237 492 aaPredicted RBP16.1■□□□□ 0.17
CCDC47-201ENST00000225726 PNMA6AP0CW24 399 aaPredicted RBP16.1■□□□□ 0.17
CCDC47-201ENST00000225726 GRIK4Q16099 956 aa16.1■□□□□ 0.17
CCDC47-201ENST00000225726 DUSP10Q9Y6W6 482 aa16.1■□□□□ 0.17
CCDC47-201ENST00000225726 EVPLQ92817 2033 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms