RNA–Protein interactions for RNA: ENST00000225603.8

CBX1-201, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-201ENST00000225603 OSMRQ99650 979 aa19.64■□□□□ 0.73
CBX1-201ENST00000225603 FAM213AQ9BRX8 229 aa19.64■□□□□ 0.73
CBX1-201ENST00000225603 STX10O60499 249 aa19.63■□□□□ 0.73
CBX1-201ENST00000225603 ITGA7Q13683 1181 aa19.63■□□□□ 0.73
CBX1-201ENST00000225603 FAM187BQ17R55 369 aa19.63■□□□□ 0.73
CBX1-201ENST00000225603 TSHZ1Q6ZSZ6 1077 aa19.63■□□□□ 0.73
CBX1-201ENST00000225603 SESTD1Q86VW0 696 aa19.63■□□□□ 0.73
CBX1-201ENST00000225603 GPD1LQ8N335 351 aa19.63■□□□□ 0.73
CBX1-201ENST00000225603 ANKRD7Q92527 254 aa19.63■□□□□ 0.73
CBX1-201ENST00000225603 DEFB118Q96PH6 123 aa19.63■□□□□ 0.73
CBX1-201ENST00000225603 ERGIC2Q96RQ1 377 aa19.63■□□□□ 0.73
CBX1-201ENST00000225603 PTPRHQ9HD43 1115 aa19.63■□□□□ 0.73
CBX1-201ENST00000225603 AGO2Q9UKV8 859 aaKnown RBP19.63■□□□□ 0.73
CBX1-201ENST00000225603 A0A1W2PQC6 194 aa19.63■□□□□ 0.73
CBX1-201ENST00000225603 RNF225M0QZC1 329 aaPredicted RBP19.63■□□□□ 0.73
CBX1-201ENST00000225603 TOM1L1O75674 476 aa19.63■□□□□ 0.73
CBX1-201ENST00000225603 HARSP12081 509 aaKnown RBP19.63■□□□□ 0.73
CBX1-201ENST00000225603 CCL5P13501 91 aa19.63■□□□□ 0.73
CBX1-201ENST00000225603 MATR3P43243 847 aaKnown RBP eCLIP19.63■□□□□ 0.73
CBX1-201ENST00000225603 ACOT2P49753 483 aa19.63■□□□□ 0.73
CBX1-201ENST00000225603 KCNMA1Q12791 1236 aa19.63■□□□□ 0.73
CBX1-201ENST00000225603 BFSP1Q12934 665 aa19.63■□□□□ 0.73
CBX1-201ENST00000225603 SEZ6Q53EL9 994 aa19.63■□□□□ 0.73
CBX1-201ENST00000225603 C1orf220Q5T0J3 134 aa19.63■□□□□ 0.73
CBX1-201ENST00000225603 FKBP15Q5T1M5 1219 aa19.63■□□□□ 0.73
CBX1-201ENST00000225603 ATF7IP2Q5U623 682 aa19.63■□□□□ 0.73
CBX1-201ENST00000225603 SLFN12LQ6IEE8 588 aa19.63■□□□□ 0.73
CBX1-201ENST00000225603 CRELD2Q6UXH1 353 aaPredicted RBP19.63■□□□□ 0.73
CBX1-201ENST00000225603 TSEN34Q9BSV6 310 aaKnown RBP19.63■□□□□ 0.73
CBX1-201ENST00000225603 MSTO1Q9BUK6 570 aa19.63■□□□□ 0.73
CBX1-201ENST00000225603 PRMT7Q9NVM4 692 aaPredicted RBP19.63■□□□□ 0.73
CBX1-201ENST00000225603 SIK3Q9Y2K2 1263 aa19.63■□□□□ 0.73
CBX1-201ENST00000225603 FRMPD3Q5JV73 1810 aa19.62■□□□□ 0.73
CBX1-201ENST00000225603 MOXD2PA6NHM9 499 aa19.62■□□□□ 0.73
CBX1-201ENST00000225603 CLDN3O15551 220 aa19.62■□□□□ 0.73
CBX1-201ENST00000225603 CABYRO75952 493 aa19.62■□□□□ 0.73
CBX1-201ENST00000225603 PROZP22891 400 aa19.62■□□□□ 0.73
CBX1-201ENST00000225603 SRGAP1Q7Z6B7 1085 aa19.62■□□□□ 0.73
CBX1-201ENST00000225603 TMEM40Q8WWA1 233 aa19.62■□□□□ 0.73
CBX1-201ENST00000225603 CPB2Q96IY4 423 aa19.62■□□□□ 0.73
CBX1-201ENST00000225603 CRACR2AQ9BSW2 395 aa19.62■□□□□ 0.73
CBX1-201ENST00000225603 ITIH6Q6UXX5 1313 aa19.62■□□□□ 0.73
CBX1-201ENST00000225603 A0A1W2PQ45 241 aaPredicted RBP19.61■□□□□ 0.73
CBX1-201ENST00000225603 A0A1W2PQY0 241 aa19.61■□□□□ 0.73
CBX1-201ENST00000225603 AKR1B15C9JRZ8 316 aaPredicted RBP19.61■□□□□ 0.73
CBX1-201ENST00000225603 MAPK13O15264 365 aa19.61■□□□□ 0.73
CBX1-201ENST00000225603 EXTL3O43909 919 aa19.61■□□□□ 0.73
CBX1-201ENST00000225603 AFPP02771 609 aaKnown RBP19.61■□□□□ 0.73
CBX1-201ENST00000225603 VAMP7P51809 220 aa19.61■□□□□ 0.73
CBX1-201ENST00000225603 LBX1P52954 281 aa19.61■□□□□ 0.73
CBX1-201ENST00000225603 RBL2Q08999 1139 aa19.61■□□□□ 0.73
CBX1-201ENST00000225603 NCBP1Q09161 790 aaKnown RBP19.61■□□□□ 0.73
CBX1-201ENST00000225603 TAF2Q6P1X5 1199 aa19.61■□□□□ 0.73
CBX1-201ENST00000225603 SYT10Q6XYQ8 523 aa19.61■□□□□ 0.73
CBX1-201ENST00000225603 INTS8Q75QN2 995 aaKnown RBP19.61■□□□□ 0.73
CBX1-201ENST00000225603 SERINC5Q86VE9 423 aa19.61■□□□□ 0.73
CBX1-201ENST00000225603 REXO1L1PQ8IX06 675 aa19.61■□□□□ 0.73
CBX1-201ENST00000225603 ARRDC4Q8NCT1 418 aa19.61■□□□□ 0.73
CBX1-201ENST00000225603 CPLX3Q8WVH0 158 aa19.61■□□□□ 0.73
CBX1-201ENST00000225603 MFSD14AQ96MC6 490 aa19.61■□□□□ 0.73
CBX1-201ENST00000225603 TCHPQ9BT92 498 aa19.61■□□□□ 0.73
CBX1-201ENST00000225603 GCOM2Q9BZD3 368 aaPredicted RBP19.61■□□□□ 0.73
CBX1-201ENST00000225603 RNF208Q9H0X6 261 aa19.61■□□□□ 0.73
CBX1-201ENST00000225603 TRMT13Q9NUP7 481 aaKnown RBP19.61■□□□□ 0.73
CBX1-201ENST00000225603 ZSCAN12O43309 604 aa19.61■□□□□ 0.73
CBX1-201ENST00000225603 FAM189A1O60320 539 aa19.61■□□□□ 0.73
CBX1-201ENST00000225603 TSPAN1O60635 241 aa19.61■□□□□ 0.73
CBX1-201ENST00000225603 GYPCP04921 128 aa19.61■□□□□ 0.73
CBX1-201ENST00000225603 DARSP14868 501 aaKnown RBP19.61■□□□□ 0.73
CBX1-201ENST00000225603 ARF4P18085 180 aaPredicted RBP19.61■□□□□ 0.73
CBX1-201ENST00000225603 WNT7BP56706 349 aa19.61■□□□□ 0.73
CBX1-201ENST00000225603 PTGISQ16647 500 aa19.61■□□□□ 0.73
CBX1-201ENST00000225603 GLT1D1Q96MS3 346 aa19.61■□□□□ 0.73
CBX1-201ENST00000225603 PANX2Q96RD6 677 aa19.61■□□□□ 0.73
CBX1-201ENST00000225603 MMRN2Q9H8L6 949 aa19.61■□□□□ 0.73
CBX1-201ENST00000225603 TULP1O00294 542 aaPredicted RBP19.6■□□□□ 0.73
CBX1-201ENST00000225603 KRT13P13646 458 aa19.6■□□□□ 0.73
CBX1-201ENST00000225603 CDC42EP1Q00587 391 aa19.6■□□□□ 0.73
CBX1-201ENST00000225603 APBA1Q02410 837 aa19.6■□□□□ 0.73
CBX1-201ENST00000225603 MCL1Q07820 350 aa19.6■□□□□ 0.73
CBX1-201ENST00000225603 CYP24A1Q07973 514 aa19.6■□□□□ 0.73
CBX1-201ENST00000225603 CTU1Q7Z7A3 348 aaKnown RBP19.6■□□□□ 0.73
CBX1-201ENST00000225603 PPFIBP1Q86W92 1011 aa19.6■□□□□ 0.73
CBX1-201ENST00000225603 NME8Q8N427 588 aa19.6■□□□□ 0.73
CBX1-201ENST00000225603 CCDC127Q96BQ5 260 aa19.6■□□□□ 0.73
CBX1-201ENST00000225603 POP1Q99575 1024 aaKnown RBP19.6■□□□□ 0.73
CBX1-201ENST00000225603 TNFSF13BQ9Y275 285 aa19.6■□□□□ 0.73
CBX1-201ENST00000225603 PPP2R2CQ9Y2T4 447 aa19.6■□□□□ 0.73
CBX1-201ENST00000225603 CNTNAP2Q9UHC6 1331 aa19.6■□□□□ 0.73
CBX1-201ENST00000225603 EPHB6O15197 1021 aa19.6■□□□□ 0.73
CBX1-201ENST00000225603 FXR1P51114 621 aaKnown RBP eCLIP19.6■□□□□ 0.73
CBX1-201ENST00000225603 ETF1P62495 437 aaKnown RBP19.6■□□□□ 0.73
CBX1-201ENST00000225603 PPP2R3AQ06190 1150 aa19.6■□□□□ 0.73
CBX1-201ENST00000225603 PPP3CAQ08209 521 aa19.6■□□□□ 0.73
CBX1-201ENST00000225603 SNX17Q15036 470 aa19.6■□□□□ 0.73
CBX1-201ENST00000225603 TMEM132AQ24JP5 1023 aa19.6■□□□□ 0.73
CBX1-201ENST00000225603 CBWD6Q4V339 395 aa19.6■□□□□ 0.73
CBX1-201ENST00000225603 CBWD3Q5JTY5 395 aa19.6■□□□□ 0.73
CBX1-201ENST00000225603 CBWD5Q5RIA9 395 aa19.6■□□□□ 0.73
CBX1-201ENST00000225603 MPZL3Q6UWV2 235 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms