RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 UBXN11Q5T124 520 aa15.33■□□□□ 0.04
SEC61B-201ENST00000223641 SLC27A1Q6PCB7 646 aa15.33■□□□□ 0.04
SEC61B-201ENST00000223641 CRELD2Q6UXH1 353 aaPredicted RBP15.33■□□□□ 0.04
SEC61B-201ENST00000223641 CDR2LQ86X02 465 aaPredicted RBP15.33■□□□□ 0.04
SEC61B-201ENST00000223641 ZSWIM2Q8NEG5 633 aa15.33■□□□□ 0.04
SEC61B-201ENST00000223641 TRIM43Q96BQ3 446 aaPredicted RBP15.33■□□□□ 0.04
SEC61B-201ENST00000223641 VWCEQ96DN2 955 aa15.33■□□□□ 0.04
SEC61B-201ENST00000223641 EEF2KMTQ96G04 330 aa15.33■□□□□ 0.04
SEC61B-201ENST00000223641 TMX1Q9H3N1 280 aa15.33■□□□□ 0.04
SEC61B-201ENST00000223641 PCIF1Q9H4Z3 704 aa15.33■□□□□ 0.04
SEC61B-201ENST00000223641 KIAA1586Q9HCI6 787 aa15.33■□□□□ 0.04
SEC61B-201ENST00000223641 AGO2Q9UKV8 859 aaKnown RBP15.33■□□□□ 0.04
SEC61B-201ENST00000223641 PIN4Q9Y237 131 aaKnown RBP15.33■□□□□ 0.04
SEC61B-201ENST00000223641 GOLGA6L19H0YKK7 550 aa15.32■□□□□ 0.04
SEC61B-201ENST00000223641 OGTO15294 1046 aa15.32■□□□□ 0.04
SEC61B-201ENST00000223641 SLC16A3O15427 465 aaKnown RBP15.32■□□□□ 0.04
SEC61B-201ENST00000223641 EXTL3O43909 919 aa15.32■□□□□ 0.04
SEC61B-201ENST00000223641 GNA14O95837 355 aa15.32■□□□□ 0.04
SEC61B-201ENST00000223641 ITGB8P26012 769 aa15.32■□□□□ 0.04
SEC61B-201ENST00000223641 CYP2C18P33260 490 aa15.32■□□□□ 0.04
SEC61B-201ENST00000223641 CYP2J2P51589 502 aa15.32■□□□□ 0.04
SEC61B-201ENST00000223641 NFX1Q12986 1120 aaKnown RBP15.32■□□□□ 0.04
SEC61B-201ENST00000223641 UVSSAQ2YD98 709 aa15.32■□□□□ 0.04
SEC61B-201ENST00000223641 ZNF568Q3ZCX4 644 aa15.32■□□□□ 0.04
SEC61B-201ENST00000223641 APTXQ7Z2E3 356 aaKnown RBP15.32■□□□□ 0.04
SEC61B-201ENST00000223641 FRMD5Q7Z6J6 570 aa15.32■□□□□ 0.04
SEC61B-201ENST00000223641 GPD1LQ8N335 351 aa15.32■□□□□ 0.04
SEC61B-201ENST00000223641 TCHPQ9BT92 498 aa15.32■□□□□ 0.04
SEC61B-201ENST00000223641 MSTO1Q9BUK6 570 aa15.32■□□□□ 0.04
SEC61B-201ENST00000223641 IFIH1Q9BYX4 1025 aaKnown RBP15.32■□□□□ 0.04
SEC61B-201ENST00000223641 PPP1R12CQ9BZL4 782 aa15.32■□□□□ 0.04
SEC61B-201ENST00000223641 ANKFY1Q9P2R3 1169 aa15.32■□□□□ 0.04
SEC61B-201ENST00000223641 TET1Q8NFU7 2136 aa15.32■□□□□ 0.04
SEC61B-201ENST00000223641 MGEA5O60502 916 aa15.31■□□□□ 0.04
SEC61B-201ENST00000223641 EXOC3O60645 756 aa15.31■□□□□ 0.04
SEC61B-201ENST00000223641 EEF1GP26641 437 aaKnown RBP15.31■□□□□ 0.04
SEC61B-201ENST00000223641 RFC2P35250 354 aa15.31■□□□□ 0.04
SEC61B-201ENST00000223641 PSMC2P35998 433 aaKnown RBP15.31■□□□□ 0.04
SEC61B-201ENST00000223641 CCL23P55773 120 aa15.31■□□□□ 0.04
SEC61B-201ENST00000223641 ENPEPQ07075 957 aa15.31■□□□□ 0.04
SEC61B-201ENST00000223641 GSE1Q14687 1217 aa15.31■□□□□ 0.04
SEC61B-201ENST00000223641 KYAT1Q16773 422 aa15.31■□□□□ 0.04
SEC61B-201ENST00000223641 DCAF4L1Q3SXM0 396 aa15.31■□□□□ 0.04
SEC61B-201ENST00000223641 TCP11X2Q5H9J9 407 aa15.31■□□□□ 0.04
SEC61B-201ENST00000223641 FAM114A1Q8IWE2 563 aa15.31■□□□□ 0.04
SEC61B-201ENST00000223641 SCLYQ96I15 445 aa15.31■□□□□ 0.04
SEC61B-201ENST00000223641 MFSD14AQ96MC6 490 aa15.31■□□□□ 0.04
SEC61B-201ENST00000223641 ADPGKQ9BRR6 497 aa15.31■□□□□ 0.04
SEC61B-201ENST00000223641 EIF2AQ9BY44 585 aaKnown RBP15.31■□□□□ 0.04
SEC61B-201ENST00000223641 CPSF3Q9UKF6 684 aaKnown RBP15.31■□□□□ 0.04
SEC61B-201ENST00000223641 FRMD4BQ9Y2L6 1034 aa15.31■□□□□ 0.04
SEC61B-201ENST00000223641 ANK1P16157 1881 aa15.31■□□□□ 0.04
SEC61B-201ENST00000223641 RBAK-RBAKDNI3L0D1 243 aa15.3■□□□□ 0.04
SEC61B-201ENST00000223641 ZNF623O75123 536 aa15.3■□□□□ 0.04
SEC61B-201ENST00000223641 ADRB2P07550 413 aa15.3■□□□□ 0.04
SEC61B-201ENST00000223641 ATP1A3P13637 1013 aa15.3■□□□□ 0.04
SEC61B-201ENST00000223641 GRM5P41594 1212 aa15.3■□□□□ 0.04
SEC61B-201ENST00000223641 SPAG1Q07617 926 aa15.3■□□□□ 0.04
SEC61B-201ENST00000223641 HSP90AA2PQ14568 343 aaPredicted RBP15.3■□□□□ 0.04
SEC61B-201ENST00000223641 SNRNP35Q16560 246 aaKnown RBP15.3■□□□□ 0.04
SEC61B-201ENST00000223641 TMEM132AQ24JP5 1023 aa15.3■□□□□ 0.04
SEC61B-201ENST00000223641 CEP135Q66GS9 1140 aa15.3■□□□□ 0.04
SEC61B-201ENST00000223641 MFSD5Q6N075 450 aa15.3■□□□□ 0.04
SEC61B-201ENST00000223641 APBB1IPQ7Z5R6 666 aaPredicted RBP15.3■□□□□ 0.04
SEC61B-201ENST00000223641 ZBTB33Q86T24 672 aa15.3■□□□□ 0.04
SEC61B-201ENST00000223641 RTN4RL1Q86UN2 441 aaPredicted RBP15.3■□□□□ 0.04
SEC61B-201ENST00000223641 CBWD2Q8IUF1 395 aa15.3■□□□□ 0.04
SEC61B-201ENST00000223641 TRIM59Q8IWR1 403 aa15.3■□□□□ 0.04
SEC61B-201ENST00000223641 FAM186BQ8IYM0 893 aa15.3■□□□□ 0.04
SEC61B-201ENST00000223641 CEP120Q8N960 986 aa15.3■□□□□ 0.04
SEC61B-201ENST00000223641 DBF4BQ8NFT6 615 aa15.3■□□□□ 0.04
SEC61B-201ENST00000223641 APBB2Q92870 758 aa15.3■□□□□ 0.04
SEC61B-201ENST00000223641 SAAL1Q96ER3 474 aa15.3■□□□□ 0.04
SEC61B-201ENST00000223641 CNOT6LQ96LI5 555 aaKnown RBP15.3■□□□□ 0.04
SEC61B-201ENST00000223641 HTATIP2Q9BUP3 242 aa15.3■□□□□ 0.04
SEC61B-201ENST00000223641 FTHL17Q9BXU8 183 aa15.3■□□□□ 0.04
SEC61B-201ENST00000223641 METTL14Q9HCE5 456 aaKnown RBP15.3■□□□□ 0.04
SEC61B-201ENST00000223641 LIMA1Q9UHB6 759 aaKnown RBP15.3■□□□□ 0.04
SEC61B-201ENST00000223641 LTBP2Q14767 1821 aa15.29■□□□□ 0.04
SEC61B-201ENST00000223641 GOLGA8IPA6NC78 632 aa15.29■□□□□ 0.04
SEC61B-201ENST00000223641 ZNF233A6NK53 670 aa15.29■□□□□ 0.04
SEC61B-201ENST00000223641 CCDC85CA6NKD9 419 aa15.29■□□□□ 0.04
SEC61B-201ENST00000223641 GOLGA8JA6NMD2 632 aa15.29■□□□□ 0.04
SEC61B-201ENST00000223641 KCNJ18B7U540 433 aa15.29■□□□□ 0.04
SEC61B-201ENST00000223641 EPB41P11171 864 aaKnown RBP15.29■□□□□ 0.04
SEC61B-201ENST00000223641 RAG1P15918 1043 aa15.29■□□□□ 0.04
SEC61B-201ENST00000223641 ZSCAN20P17040 1043 aaPredicted RBP15.29■□□□□ 0.04
SEC61B-201ENST00000223641 MATR3P43243 847 aaKnown RBP eCLIP15.29■□□□□ 0.04
SEC61B-201ENST00000223641 ACOT2P49753 483 aa15.29■□□□□ 0.04
SEC61B-201ENST00000223641 TPM4P67936 248 aa15.29■□□□□ 0.04
SEC61B-201ENST00000223641 KCNJ12Q14500 433 aa15.29■□□□□ 0.04
SEC61B-201ENST00000223641 HSP90AA4PQ58FG1 418 aa15.29■□□□□ 0.04
SEC61B-201ENST00000223641 ZBTB41Q5SVQ8 909 aa15.29■□□□□ 0.04
SEC61B-201ENST00000223641 INTS8Q75QN2 995 aaKnown RBP15.29■□□□□ 0.04
SEC61B-201ENST00000223641 MRPL10Q7Z7H8 261 aaKnown RBP15.29■□□□□ 0.04
SEC61B-201ENST00000223641 TNS4Q8IZW8 715 aa15.29■□□□□ 0.04
SEC61B-201ENST00000223641 SMG8Q8ND04 991 aaKnown RBP15.29■□□□□ 0.04
SEC61B-201ENST00000223641 FAM213AQ9BRX8 229 aa15.29■□□□□ 0.04
SEC61B-201ENST00000223641 TSPYL2Q9H2G4 693 aaPredicted RBP15.29■□□□□ 0.04
SEC61B-201ENST00000223641 RGS18Q9NS28 235 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms