RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 TOPORSQ9NS56 1045 aaPredicted RBP16.04■□□□□ 0.16
UBE2D4-201ENST00000222402 HOMER3Q9NSC5 361 aa16.04■□□□□ 0.16
UBE2D4-201ENST00000222402 RAB20Q9NX57 234 aa16.04■□□□□ 0.16
UBE2D4-201ENST00000222402 K7ERI5 159 aa16.03■□□□□ 0.16
UBE2D4-201ENST00000222402 CES2O00748 559 aa16.03■□□□□ 0.16
UBE2D4-201ENST00000222402 CLDN3O15551 220 aa16.03■□□□□ 0.16
UBE2D4-201ENST00000222402 NR3C2P08235 984 aa16.03■□□□□ 0.16
UBE2D4-201ENST00000222402 ATP5DP30049 168 aa16.03■□□□□ 0.16
UBE2D4-201ENST00000222402 SLMAPQ14BN4 828 aa16.03■□□□□ 0.16
UBE2D4-201ENST00000222402 SYTL5Q8TDW5 730 aaPredicted RBP16.03■□□□□ 0.16
UBE2D4-201ENST00000222402 ATG4CQ96DT6 458 aa16.03■□□□□ 0.16
UBE2D4-201ENST00000222402 WRNIP1Q96S55 665 aa16.03■□□□□ 0.16
UBE2D4-201ENST00000222402 YDJCA8MPS7 323 aa16.03■□□□□ 0.16
UBE2D4-201ENST00000222402 BTNL10A8MVZ5 291 aa16.03■□□□□ 0.16
UBE2D4-201ENST00000222402 PHF2O75151 1096 aa16.03■□□□□ 0.16
UBE2D4-201ENST00000222402 PTGISQ16647 500 aa16.03■□□□□ 0.16
UBE2D4-201ENST00000222402 SPDYE2Q495Y8 402 aa16.03■□□□□ 0.16
UBE2D4-201ENST00000222402 PRAMEF18Q5VWM3 479 aa16.03■□□□□ 0.16
UBE2D4-201ENST00000222402 AADACL2Q6P093 401 aa16.03■□□□□ 0.16
UBE2D4-201ENST00000222402 EEPD1Q7L9B9 569 aa16.03■□□□□ 0.16
UBE2D4-201ENST00000222402 SLC47A2Q86VL8 602 aa16.03■□□□□ 0.16
UBE2D4-201ENST00000222402 IQCKQ8N0W5 287 aa16.03■□□□□ 0.16
UBE2D4-201ENST00000222402 FBXO25Q8TCJ0 367 aa16.03■□□□□ 0.16
UBE2D4-201ENST00000222402 TRPC6Q9Y210 931 aa16.03■□□□□ 0.16
UBE2D4-201ENST00000222402 COL22A1Q8NFW1 1626 aaPredicted RBP16.03■□□□□ 0.16
UBE2D4-201ENST00000222402 NSUN6Q8TEA1 469 aaKnown RBP16.03■□□□□ 0.16
UBE2D4-201ENST00000222402 GRK7Q8WTQ7 553 aa16.03■□□□□ 0.16
UBE2D4-201ENST00000222402 SCFD2Q8WU76 684 aa16.03■□□□□ 0.16
UBE2D4-201ENST00000222402 CNOT10Q9H9A5 744 aaKnown RBP16.03■□□□□ 0.16
UBE2D4-201ENST00000222402 TMBIM4Q9HC24 238 aa16.03■□□□□ 0.16
UBE2D4-201ENST00000222402 AGO4Q9HCK5 861 aaKnown RBP16.03■□□□□ 0.16
UBE2D4-201ENST00000222402 AGTPBP1Q9UPW5 1226 aa16.03■□□□□ 0.16
UBE2D4-201ENST00000222402 ATP2A1O14983 1001 aa16.02■□□□□ 0.16
UBE2D4-201ENST00000222402 KRT19P08727 400 aa16.02■□□□□ 0.16
UBE2D4-201ENST00000222402 C2CD6Q53TS8 623 aa16.02■□□□□ 0.16
UBE2D4-201ENST00000222402 MIS18BP1Q6P0N0 1132 aa16.02■□□□□ 0.16
UBE2D4-201ENST00000222402 ZNF572Q7Z3I7 529 aaPredicted RBP16.02■□□□□ 0.16
UBE2D4-201ENST00000222402 TMEM117Q9H0C3 514 aa16.02■□□□□ 0.16
UBE2D4-201ENST00000222402 ATP6V0A4Q9HBG4 840 aa16.02■□□□□ 0.16
UBE2D4-201ENST00000222402 SIX2Q9NPC8 291 aa16.02■□□□□ 0.16
UBE2D4-201ENST00000222402 TBK1Q9UHD2 729 aa16.02■□□□□ 0.16
UBE2D4-201ENST00000222402 TBX20Q9UMR3 447 aa16.02■□□□□ 0.16
UBE2D4-201ENST00000222402 BTAF1O14981 1849 aa16.02■□□□□ 0.16
UBE2D4-201ENST00000222402 P4HA2O15460 535 aa16.02■□□□□ 0.16
UBE2D4-201ENST00000222402 ACOT2P49753 483 aa16.02■□□□□ 0.16
UBE2D4-201ENST00000222402 HMGCS2P54868 508 aa16.02■□□□□ 0.16
UBE2D4-201ENST00000222402 MAPK7Q13164 816 aa16.02■□□□□ 0.16
UBE2D4-201ENST00000222402 CCDC38Q502W7 563 aa16.02■□□□□ 0.16
UBE2D4-201ENST00000222402 TMEM270Q6UE05 265 aa16.02■□□□□ 0.16
UBE2D4-201ENST00000222402 PALB2Q86YC2 1186 aa16.02■□□□□ 0.16
UBE2D4-201ENST00000222402 GPD1LQ8N335 351 aa16.02■□□□□ 0.16
UBE2D4-201ENST00000222402 CPA5Q8WXQ8 436 aa16.02■□□□□ 0.16
UBE2D4-201ENST00000222402 DHX38Q92620 1227 aaKnown RBP16.02■□□□□ 0.16
UBE2D4-201ENST00000222402 CDHR1Q96JP9 859 aa16.02■□□□□ 0.16
UBE2D4-201ENST00000222402 ZSWIM1Q9BR11 485 aa16.02■□□□□ 0.16
UBE2D4-201ENST00000222402 POLR3FQ9H1D9 316 aaPredicted RBP16.02■□□□□ 0.16
UBE2D4-201ENST00000222402 KCNG1Q9UIX4 513 aa16.02■□□□□ 0.16
UBE2D4-201ENST00000222402 ZNF148Q9UQR1 794 aa16.02■□□□□ 0.16
UBE2D4-201ENST00000222402 CD2APQ9Y5K6 639 aa16.02■□□□□ 0.16
UBE2D4-201ENST00000222402 OPLAHO14841 1288 aa16.02■□□□□ 0.15
UBE2D4-201ENST00000222402 PLSCR1O15162 318 aa16.02■□□□□ 0.15
UBE2D4-201ENST00000222402 RPS6KA5O75582 802 aa16.02■□□□□ 0.15
UBE2D4-201ENST00000222402 CD58P19256 250 aa16.02■□□□□ 0.15
UBE2D4-201ENST00000222402 SCP2P22307 547 aa16.02■□□□□ 0.15
UBE2D4-201ENST00000222402 POLD1P28340 1107 aa16.02■□□□□ 0.15
UBE2D4-201ENST00000222402 NPTX2P47972 431 aa16.02■□□□□ 0.15
UBE2D4-201ENST00000222402 SLC15A2Q16348 729 aa16.02■□□□□ 0.15
UBE2D4-201ENST00000222402 ZNF394Q53GI3 561 aa16.02■□□□□ 0.15
UBE2D4-201ENST00000222402 CYP4F22Q6NT55 531 aa16.02■□□□□ 0.15
UBE2D4-201ENST00000222402 LRRC57Q8N9N7 239 aa16.02■□□□□ 0.15
UBE2D4-201ENST00000222402 TAS1R2Q8TE23 839 aa16.02■□□□□ 0.15
UBE2D4-201ENST00000222402 KRT35Q92764 455 aa16.02■□□□□ 0.15
UBE2D4-201ENST00000222402 PAGR1Q9BTK6 254 aa16.02■□□□□ 0.15
UBE2D4-201ENST00000222402 ADAM22Q9P0K1 906 aa16.02■□□□□ 0.15
UBE2D4-201ENST00000222402 NOP56O00567 594 aaKnown RBP16.02■□□□□ 0.15
UBE2D4-201ENST00000222402 DPEP1P16444 411 aa16.02■□□□□ 0.15
UBE2D4-201ENST00000222402 DGKZQ13574 1117 aa16.02■□□□□ 0.15
UBE2D4-201ENST00000222402 C6orf118Q5T5N4 469 aa16.02■□□□□ 0.15
UBE2D4-201ENST00000222402 MYOZ2Q9NPC6 264 aa16.02■□□□□ 0.15
UBE2D4-201ENST00000222402 WRAP73Q9P2S5 460 aaPredicted RBP16.02■□□□□ 0.15
UBE2D4-201ENST00000222402 ANAPC5Q9UJX4 755 aa16.02■□□□□ 0.15
UBE2D4-201ENST00000222402 LAMB1P07942 1786 aa16.02■□□□□ 0.15
UBE2D4-201ENST00000222402 MDM1Q8TC05 714 aa16.01■□□□□ 0.15
UBE2D4-201ENST00000222402 MSTO1Q9BUK6 570 aa16.01■□□□□ 0.15
UBE2D4-201ENST00000222402 MEFVO15553 781 aaPredicted RBP16.01■□□□□ 0.15
UBE2D4-201ENST00000222402 NF2P35240 595 aa16.01■□□□□ 0.15
UBE2D4-201ENST00000222402 PTENP60484 403 aa16.01■□□□□ 0.15
UBE2D4-201ENST00000222402 ADCY2Q08462 1091 aa16.01■□□□□ 0.15
UBE2D4-201ENST00000222402 ZBTB33Q86T24 672 aa16.01■□□□□ 0.15
UBE2D4-201ENST00000222402 TAB3Q8N5C8 712 aaPredicted RBP16.01■□□□□ 0.15
UBE2D4-201ENST00000222402 CCDC197Q8NCU1 140 aa16.01■□□□□ 0.15
UBE2D4-201ENST00000222402 TMEM8AQ9HCN3 771 aa16.01■□□□□ 0.15
UBE2D4-201ENST00000222402 KIAA1551Q9HCM1 1747 aa16.01■□□□□ 0.15
UBE2D4-201ENST00000222402 SLC29A2Q14542 456 aa16.01■□□□□ 0.15
UBE2D4-201ENST00000222402 TRIM11Q96F44 468 aa16.01■□□□□ 0.15
UBE2D4-201ENST00000222402 PDCD2LQ9BRP1 358 aa16.01■□□□□ 0.15
UBE2D4-201ENST00000222402 LAMB2P55268 1798 aa16■□□□□ 0.15
UBE2D4-201ENST00000222402 MMP14P50281 582 aa16■□□□□ 0.15
UBE2D4-201ENST00000222402 JAM2P57087 298 aa16■□□□□ 0.15
UBE2D4-201ENST00000222402 ZNF844Q08AG5 666 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms