RNA–Protein interactions for RNA: ENST00000221973.7

LIM2-201, Transcript of lens intrinsic membrane protein 2, humanhuman

TSL 1 (best) BASIC

Gene LIM2, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-201ENST00000221973 FZD8Q9H461 694 aa18■□□□□ 0.47
LIM2-201ENST00000221973 CD320Q9NPF0 282 aa18■□□□□ 0.47
LIM2-201ENST00000221973 TBX20Q9UMR3 447 aa18■□□□□ 0.47
LIM2-201ENST00000221973 ST3GAL5Q9UNP4 418 aa18■□□□□ 0.47
LIM2-201ENST00000221973 USP20Q9Y2K6 914 aa18■□□□□ 0.47
LIM2-201ENST00000221973 NLRC5Q86WI3 1866 aa18■□□□□ 0.47
LIM2-201ENST00000221973 C5orf42Q9H799 3197 aa17.99■□□□□ 0.47
LIM2-201ENST00000221973 MYO7AQ13402 2215 aa17.99■□□□□ 0.47
LIM2-201ENST00000221973 B4GALT5O43286 388 aa17.99■□□□□ 0.47
LIM2-201ENST00000221973 ERLIN2O94905 339 aa17.99■□□□□ 0.47
LIM2-201ENST00000221973 BMP6P22004 513 aa17.99■□□□□ 0.47
LIM2-201ENST00000221973 SCP2P22307 547 aa17.99■□□□□ 0.47
LIM2-201ENST00000221973 SFPQP23246 707 aaKnown RBP eCLIP17.99■□□□□ 0.47
LIM2-201ENST00000221973 CD52P31358 61 aa17.99■□□□□ 0.47
LIM2-201ENST00000221973 KCNA1Q09470 495 aa17.99■□□□□ 0.47
LIM2-201ENST00000221973 PAK2Q13177 524 aa17.99■□□□□ 0.47
LIM2-201ENST00000221973 ALCAMQ13740 583 aa17.99■□□□□ 0.47
LIM2-201ENST00000221973 TMEM132AQ24JP5 1023 aa17.99■□□□□ 0.47
LIM2-201ENST00000221973 L1TD1Q5T7N2 865 aaKnown RBP17.99■□□□□ 0.47
LIM2-201ENST00000221973 TSHZ1Q6ZSZ6 1077 aa17.99■□□□□ 0.47
LIM2-201ENST00000221973 NELFCDQ8IXH7 590 aa17.99■□□□□ 0.47
LIM2-201ENST00000221973 TMEM192Q8IY95 271 aa17.99■□□□□ 0.47
LIM2-201ENST00000221973 TRIML1Q8N9V2 468 aa17.99■□□□□ 0.47
LIM2-201ENST00000221973 SCFD1Q8WVM8 642 aa17.99■□□□□ 0.47
LIM2-201ENST00000221973 HVCN1Q96D96 273 aa17.99■□□□□ 0.47
LIM2-201ENST00000221973 SAMD11Q96NU1 681 aa17.99■□□□□ 0.47
LIM2-201ENST00000221973 PRMT7Q9NVM4 692 aaPredicted RBP17.99■□□□□ 0.47
LIM2-201ENST00000221973 SQORQ9Y6N5 450 aa17.99■□□□□ 0.47
LIM2-201ENST00000221973 TTC3P53804 2025 aa17.99■□□□□ 0.47
LIM2-201ENST00000221973 ATG2AQ2TAZ0 1938 aa17.98■□□□□ 0.47
LIM2-201ENST00000221973 ENPP3O14638 875 aa17.98■□□□□ 0.47
LIM2-201ENST00000221973 GPR182O15218 404 aa17.98■□□□□ 0.47
LIM2-201ENST00000221973 EIF3DO15371 548 aaKnown RBP eCLIP17.98■□□□□ 0.47
LIM2-201ENST00000221973 TSPAN1O60635 241 aa17.98■□□□□ 0.47
LIM2-201ENST00000221973 LETM1O95202 739 aaPredicted RBP17.98■□□□□ 0.47
LIM2-201ENST00000221973 EDN1P05305 212 aa17.98■□□□□ 0.47
LIM2-201ENST00000221973 ABCD1P33897 745 aa17.98■□□□□ 0.47
LIM2-201ENST00000221973 PRPF4BQ13523 1007 aaKnown RBP17.98■□□□□ 0.47
LIM2-201ENST00000221973 AMHR2Q16671 573 aa17.98■□□□□ 0.47
LIM2-201ENST00000221973 FAM187BQ17R55 369 aa17.98■□□□□ 0.47
LIM2-201ENST00000221973 SASS6Q6UVJ0 657 aa17.98■□□□□ 0.47
LIM2-201ENST00000221973 PPP4R3CPQ6ZMV5 832 aa17.98■□□□□ 0.47
LIM2-201ENST00000221973 CRIPAKQ8N1N5 446 aa17.98■□□□□ 0.47
LIM2-201ENST00000221973 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.98■□□□□ 0.47
LIM2-201ENST00000221973 ZNF507Q8TCN5 953 aa17.98■□□□□ 0.47
LIM2-201ENST00000221973 LINC01599Q8WXQ3 324 aa17.98■□□□□ 0.47
LIM2-201ENST00000221973 BICD1Q96G01 975 aa17.98■□□□□ 0.47
LIM2-201ENST00000221973 ACCSQ96QU6 501 aa17.98■□□□□ 0.47
LIM2-201ENST00000221973 GTPBP4Q9BZE4 634 aaKnown RBP17.98■□□□□ 0.47
LIM2-201ENST00000221973 GZF1Q9H116 711 aaPredicted RBP17.98■□□□□ 0.47
LIM2-201ENST00000221973 IKZF4Q9H2S9 585 aa17.98■□□□□ 0.47
LIM2-201ENST00000221973 EPHX3Q9H6B9 360 aa17.98■□□□□ 0.47
LIM2-201ENST00000221973 ERVK-5Q9HDB9 667 aa17.98■□□□□ 0.47
LIM2-201ENST00000221973 PADI3Q9ULW8 664 aa17.98■□□□□ 0.47
LIM2-201ENST00000221973 RALGAPA2Q2PPJ7 1873 aa17.98■□□□□ 0.47
LIM2-201ENST00000221973 SYCE3A1L190 88 aa17.97■□□□□ 0.47
LIM2-201ENST00000221973 TTLL13PA6NNM8 815 aa17.97■□□□□ 0.47
LIM2-201ENST00000221973 ACKR2O00590 384 aa17.97■□□□□ 0.47
LIM2-201ENST00000221973 HOXD13P35453 343 aa17.97■□□□□ 0.47
LIM2-201ENST00000221973 PRCPP42785 496 aa17.97■□□□□ 0.47
LIM2-201ENST00000221973 NLRP12P59046 1061 aa17.97■□□□□ 0.47
LIM2-201ENST00000221973 GPM6BQ13491 265 aa17.97■□□□□ 0.47
LIM2-201ENST00000221973 COL19A1Q14993 1142 aa17.97■□□□□ 0.47
LIM2-201ENST00000221973 ZSCAN23Q3MJ62 389 aa17.97■□□□□ 0.47
LIM2-201ENST00000221973 LEXMQ3ZCV2 418 aa17.97■□□□□ 0.47
LIM2-201ENST00000221973 RTN4RL1Q86UN2 441 aaPredicted RBP17.97■□□□□ 0.47
LIM2-201ENST00000221973 MAP4K3Q8IVH8 894 aa17.97■□□□□ 0.47
LIM2-201ENST00000221973 SYCP3Q8IZU3 236 aa17.97■□□□□ 0.47
LIM2-201ENST00000221973 KCNN1Q92952 543 aa17.97■□□□□ 0.47
LIM2-201ENST00000221973 ZNF689Q96CS4 500 aaPredicted RBP17.97■□□□□ 0.47
LIM2-201ENST00000221973 CPB2Q96IY4 423 aa17.97■□□□□ 0.47
LIM2-201ENST00000221973 PRIMPOLQ96LW4 560 aa17.97■□□□□ 0.47
LIM2-201ENST00000221973 TARS2Q9BW92 718 aaKnown RBP17.97■□□□□ 0.47
LIM2-201ENST00000221973 MRPL4Q9BYD3 311 aaKnown RBP17.97■□□□□ 0.47
LIM2-201ENST00000221973 EXOC7Q9UPT5 735 aa17.97■□□□□ 0.47
LIM2-201ENST00000221973 PIN4Q9Y237 131 aaKnown RBP17.97■□□□□ 0.47
LIM2-201ENST00000221973 UBE4BO95155 1302 aa17.97■□□□□ 0.47
LIM2-201ENST00000221973 C5orf67F2Z3F1 127 aa17.96■□□□□ 0.47
LIM2-201ENST00000221973 CD44P16070 742 aaKnown RBP17.96■□□□□ 0.47
LIM2-201ENST00000221973 ARF4P18085 180 aaPredicted RBP17.96■□□□□ 0.47
LIM2-201ENST00000221973 NCBP1Q09161 790 aaKnown RBP17.96■□□□□ 0.47
LIM2-201ENST00000221973 PCBP1Q15365 356 aaKnown RBP eCLIP17.96■□□□□ 0.47
LIM2-201ENST00000221973 GUF1Q8N442 669 aaKnown RBP17.96■□□□□ 0.47
LIM2-201ENST00000221973 TMEM206Q9H813 350 aa17.96■□□□□ 0.47
LIM2-201ENST00000221973 AGPAT5Q9NUQ2 364 aa17.96■□□□□ 0.47
LIM2-201ENST00000221973 CNTNAP2Q9UHC6 1331 aa17.96■□□□□ 0.46
LIM2-201ENST00000221973 HNRNPDLO14979 420 aaKnown RBP17.95■□□□□ 0.46
LIM2-201ENST00000221973 KIF20AO95235 890 aa17.95■□□□□ 0.46
LIM2-201ENST00000221973 KCNA5P22460 613 aa17.95■□□□□ 0.46
LIM2-201ENST00000221973 HOXA11P31270 313 aaPredicted RBP17.95■□□□□ 0.46
LIM2-201ENST00000221973 LIG4P49917 911 aa17.95■□□□□ 0.46
LIM2-201ENST00000221973 STIM1Q13586 685 aa17.95■□□□□ 0.46
LIM2-201ENST00000221973 KNOP1Q1ED39 458 aaKnown RBP17.95■□□□□ 0.46
LIM2-201ENST00000221973 BMT2Q1RMZ1 405 aa17.95■□□□□ 0.46
LIM2-201ENST00000221973 DPCR1Q3MIW9 517 aa17.95■□□□□ 0.46
LIM2-201ENST00000221973 ATF7IP2Q5U623 682 aa17.95■□□□□ 0.46
LIM2-201ENST00000221973 KLHL10Q6JEL2 608 aa17.95■□□□□ 0.46
LIM2-201ENST00000221973 CDR2LQ86X02 465 aaPredicted RBP17.95■□□□□ 0.46
LIM2-201ENST00000221973 ADSSL1Q8N142 457 aa17.95■□□□□ 0.46
LIM2-201ENST00000221973 CLP1Q92989 425 aaKnown RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms