RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 SERPINA10Q9UK55 444 aa14.59□□□□□ -0.07
GABPB1-201ENST00000220429 PNMA2Q9UL42 364 aa14.59□□□□□ -0.07
GABPB1-201ENST00000220429 MYH10P35580 1976 aa14.59□□□□□ -0.07
GABPB1-201ENST00000220429 A0A1W2PQC6 194 aa14.58□□□□□ -0.07
GABPB1-201ENST00000220429 HTR3EA5X5Y0 456 aa14.58□□□□□ -0.07
GABPB1-201ENST00000220429 SIGLEC16A6NMB1 481 aa14.58□□□□□ -0.07
GABPB1-201ENST00000220429 USP17L15C9J2P7 530 aa14.58□□□□□ -0.07
GABPB1-201ENST00000220429 USP17L13C9JLJ4 530 aa14.58□□□□□ -0.07
GABPB1-201ENST00000220429 USP17L11C9JVI0 530 aa14.58□□□□□ -0.07
GABPB1-201ENST00000220429 USP17L18D6R9N7 530 aa14.58□□□□□ -0.07
GABPB1-201ENST00000220429 USP17L22D6RA61 530 aa14.58□□□□□ -0.07
GABPB1-201ENST00000220429 USP17L17D6RBQ6 530 aa14.58□□□□□ -0.07
GABPB1-201ENST00000220429 USP17L19D6RCP7 530 aa14.58□□□□□ -0.07
GABPB1-201ENST00000220429 USP17L20D6RJB6 530 aa14.58□□□□□ -0.07
GABPB1-201ENST00000220429 ATP9BO43861 1147 aa14.58□□□□□ -0.07
GABPB1-201ENST00000220429 OAS1P00973 400 aaKnown RBP14.58□□□□□ -0.07
GABPB1-201ENST00000220429 CCNB1P14635 433 aa14.58□□□□□ -0.07
GABPB1-201ENST00000220429 HPCAP84074 193 aa14.58□□□□□ -0.07
GABPB1-201ENST00000220429 USP17L24Q0WX57 530 aa14.58□□□□□ -0.07
GABPB1-201ENST00000220429 MTMR3Q13615 1198 aa14.58□□□□□ -0.07
GABPB1-201ENST00000220429 ZC2HC1CQ53FD0 456 aaPredicted RBP14.58□□□□□ -0.07
GABPB1-201ENST00000220429 COBLL1Q53SF7 1204 aa14.58□□□□□ -0.07
GABPB1-201ENST00000220429 ZNF772Q68DY9 489 aaPredicted RBP14.58□□□□□ -0.07
GABPB1-201ENST00000220429 CNNM4Q6P4Q7 775 aa14.58□□□□□ -0.07
GABPB1-201ENST00000220429 USP17L6PQ6QN14 398 aa14.58□□□□□ -0.07
GABPB1-201ENST00000220429 EXOC8Q8IYI6 725 aa14.58□□□□□ -0.07
GABPB1-201ENST00000220429 EIF1ADQ8N9N8 165 aaKnown RBP14.58□□□□□ -0.07
GABPB1-201ENST00000220429 C7orf43Q8WVR3 580 aa14.58□□□□□ -0.07
GABPB1-201ENST00000220429 RAD54LQ92698 747 aa14.58□□□□□ -0.07
GABPB1-201ENST00000220429 RNF25Q96BH1 459 aaPredicted RBP14.58□□□□□ -0.07
GABPB1-201ENST00000220429 HAUS1Q96CS2 278 aa14.58□□□□□ -0.07
GABPB1-201ENST00000220429 CDK5RAP3Q96JB5 506 aa14.58□□□□□ -0.07
GABPB1-201ENST00000220429 SMC6Q96SB8 1091 aa14.58□□□□□ -0.07
GABPB1-201ENST00000220429 MTFR1LQ9H019 292 aa14.58□□□□□ -0.07
GABPB1-201ENST00000220429 ISCUQ9H1K1 167 aa14.58□□□□□ -0.07
GABPB1-201ENST00000220429 MLXIPQ9HAP2 919 aa14.58□□□□□ -0.07
GABPB1-201ENST00000220429 TUBA8Q9NY65 449 aaPredicted RBP14.58□□□□□ -0.07
GABPB1-201ENST00000220429 MAGEC2Q9UBF1 373 aaPredicted RBP14.58□□□□□ -0.07
GABPB1-201ENST00000220429 RNF14Q9UBS8 474 aa14.58□□□□□ -0.07
GABPB1-201ENST00000220429 ZNF180Q9UJW8 692 aa14.58□□□□□ -0.07
GABPB1-201ENST00000220429 CROTQ9UKG9 612 aa14.58□□□□□ -0.07
GABPB1-201ENST00000220429 CAPN11Q9UMQ6 739 aa14.58□□□□□ -0.07
GABPB1-201ENST00000220429 SMCHD1A6NHR9 2005 aa14.58□□□□□ -0.08
GABPB1-201ENST00000220429 BICDL2A1A5D9 508 aa14.58□□□□□ -0.08
GABPB1-201ENST00000220429 H0Y3Z8 333 aa14.58□□□□□ -0.08
GABPB1-201ENST00000220429 NPM3O75607 178 aaKnown RBP14.58□□□□□ -0.08
GABPB1-201ENST00000220429 GDF11O95390 407 aa14.58□□□□□ -0.08
GABPB1-201ENST00000220429 GM2AP17900 193 aa14.58□□□□□ -0.08
GABPB1-201ENST00000220429 PDE6CP51160 858 aa14.58□□□□□ -0.08
GABPB1-201ENST00000220429 ECM1Q16610 540 aa14.58□□□□□ -0.08
GABPB1-201ENST00000220429 TMEM119Q4V9L6 283 aa14.58□□□□□ -0.08
GABPB1-201ENST00000220429 KRT79Q5XKE5 535 aa14.58□□□□□ -0.08
GABPB1-201ENST00000220429 THOC7Q6I9Y2 204 aaKnown RBP14.58□□□□□ -0.08
GABPB1-201ENST00000220429 KLC3Q6P597 504 aa14.58□□□□□ -0.08
GABPB1-201ENST00000220429 GET4Q7L5D6 327 aaPredicted RBP14.58□□□□□ -0.08
GABPB1-201ENST00000220429 DYMQ7RTS9 669 aa14.58□□□□□ -0.08
GABPB1-201ENST00000220429 SUPT20HQ8NEM7 779 aa14.58□□□□□ -0.08
GABPB1-201ENST00000220429 ETNK1Q9HBU6 452 aa14.58□□□□□ -0.08
GABPB1-201ENST00000220429 NCK2O43639 380 aa14.57□□□□□ -0.08
GABPB1-201ENST00000220429 SUN1O94901 812 aa14.57□□□□□ -0.08
GABPB1-201ENST00000220429 SKIV2L2P42285 1042 aaKnown RBP14.57□□□□□ -0.08
GABPB1-201ENST00000220429 CDK17Q00537 523 aa14.57□□□□□ -0.08
GABPB1-201ENST00000220429 PARP6Q2NL67 630 aa14.57□□□□□ -0.08
GABPB1-201ENST00000220429 ZNF280DQ6N043 979 aa14.57□□□□□ -0.08
GABPB1-201ENST00000220429 UNC13DQ70J99 1090 aa14.57□□□□□ -0.08
GABPB1-201ENST00000220429 ZC3H18Q86VM9 953 aaKnown RBP14.57□□□□□ -0.08
GABPB1-201ENST00000220429 SAMD3Q8N6K7 520 aa14.57□□□□□ -0.08
GABPB1-201ENST00000220429 SELENOSQ9BQE4 189 aa14.57□□□□□ -0.08
GABPB1-201ENST00000220429 TUBGCP2Q9BSJ2 902 aa14.57□□□□□ -0.08
GABPB1-201ENST00000220429 TCHPQ9BT92 498 aa14.57□□□□□ -0.08
GABPB1-201ENST00000220429 POLR3CQ9BUI4 534 aaPredicted RBP14.57□□□□□ -0.08
GABPB1-201ENST00000220429 SEMA6BQ9H3T3 888 aa14.57□□□□□ -0.08
GABPB1-201ENST00000220429 SH2D4AQ9H788 454 aa14.57□□□□□ -0.08
GABPB1-201ENST00000220429 TDRD3Q9H7E2 651 aaKnown RBP14.57□□□□□ -0.08
GABPB1-201ENST00000220429 RXFP1Q9HBX9 757 aa14.57□□□□□ -0.08
GABPB1-201ENST00000220429 LARSQ9P2J5 1176 aaKnown RBP14.57□□□□□ -0.08
GABPB1-201ENST00000220429 FBXL5Q9UKA1 691 aa14.57□□□□□ -0.08
GABPB1-201ENST00000220429 PCDHA1Q9Y5I3 950 aa14.57□□□□□ -0.08
GABPB1-201ENST00000220429 EIF3FO00303 357 aaPredicted RBP14.57□□□□□ -0.08
GABPB1-201ENST00000220429 NKRFO15226 690 aaKnown RBP eCLIP14.57□□□□□ -0.08
GABPB1-201ENST00000220429 VHLP40337 213 aa14.57□□□□□ -0.08
GABPB1-201ENST00000220429 PPP1R2P41236 205 aa14.57□□□□□ -0.08
GABPB1-201ENST00000220429 RNASELQ05823 741 aaKnown RBP14.57□□□□□ -0.08
GABPB1-201ENST00000220429 LIN52Q52LA3 116 aa14.57□□□□□ -0.08
GABPB1-201ENST00000220429 PALB2Q86YC2 1186 aa14.57□□□□□ -0.08
GABPB1-201ENST00000220429 MAP7D3Q8IWC1 876 aa14.57□□□□□ -0.08
GABPB1-201ENST00000220429 CNOT6LQ96LI5 555 aaKnown RBP14.57□□□□□ -0.08
GABPB1-201ENST00000220429 PRMT1Q99873 361 aaKnown RBP14.57□□□□□ -0.08
GABPB1-201ENST00000220429 CENPKQ9BS16 269 aa14.57□□□□□ -0.08
GABPB1-201ENST00000220429 CCDC134Q9H6E4 229 aa14.57□□□□□ -0.08
GABPB1-201ENST00000220429 FAM114A2Q9NRY5 505 aa14.57□□□□□ -0.08
GABPB1-201ENST00000220429 PVALEFA0A1B0GWK0 134 aa14.57□□□□□ -0.08
GABPB1-201ENST00000220429 ECHS1P30084 290 aa14.57□□□□□ -0.08
GABPB1-201ENST00000220429 DNM2P50570 870 aa14.57□□□□□ -0.08
GABPB1-201ENST00000220429 JAG1P78504 1218 aa14.57□□□□□ -0.08
GABPB1-201ENST00000220429 RASSF7Q02833 373 aa14.57□□□□□ -0.08
GABPB1-201ENST00000220429 KPNB1Q14974 876 aaKnown RBP14.57□□□□□ -0.08
GABPB1-201ENST00000220429 SPA17Q15506 151 aa14.57□□□□□ -0.08
GABPB1-201ENST00000220429 CENPPQ6IPU0 288 aa14.57□□□□□ -0.08
GABPB1-201ENST00000220429 TMEM179Q6ZVK1 233 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms