RNA–Protein interactions for RNA: ENST00000218388.8

TIMP1-201, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP1, Length 892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-201ENST00000218388 A0A0B4J269 797 aa14.38□□□□□ -0.11
TIMP1-201ENST00000218388 A0A0U1RQF3 1178 aa14.38□□□□□ -0.11
TIMP1-201ENST00000218388 OGTO15294 1046 aa14.38□□□□□ -0.11
TIMP1-201ENST00000218388 AMHP03971 560 aa14.38□□□□□ -0.11
TIMP1-201ENST00000218388 HARSP12081 509 aaKnown RBP14.38□□□□□ -0.11
TIMP1-201ENST00000218388 CD44P16070 742 aaKnown RBP14.38□□□□□ -0.11
TIMP1-201ENST00000218388 ERCC5P28715 1186 aaPredicted RBP14.38□□□□□ -0.11
TIMP1-201ENST00000218388 NFIL3Q16649 462 aa14.38□□□□□ -0.11
TIMP1-201ENST00000218388 EEF1DP3Q658K8 133 aa14.38□□□□□ -0.11
TIMP1-201ENST00000218388 SLC39A4Q6P5W5 647 aa14.38□□□□□ -0.11
TIMP1-201ENST00000218388 ZNF365Q70YC5 407 aa14.38□□□□□ -0.11
TIMP1-201ENST00000218388 CDR2LQ86X02 465 aaPredicted RBP14.38□□□□□ -0.11
TIMP1-201ENST00000218388 ZBTB45Q96K62 511 aaPredicted RBP14.38□□□□□ -0.11
TIMP1-201ENST00000218388 CCDC94Q9BW85 323 aaPredicted RBP14.38□□□□□ -0.11
TIMP1-201ENST00000218388 EIF2AQ9BY44 585 aaKnown RBP14.38□□□□□ -0.11
TIMP1-201ENST00000218388 GZF1Q9H116 711 aaPredicted RBP14.38□□□□□ -0.11
TIMP1-201ENST00000218388 KIAA1586Q9HCI6 787 aa14.38□□□□□ -0.11
TIMP1-201ENST00000218388 RWDD2AQ9UIY3 292 aa14.38□□□□□ -0.11
TIMP1-201ENST00000218388 AGO2Q9UKV8 859 aaKnown RBP14.38□□□□□ -0.11
TIMP1-201ENST00000218388 LRFN2Q9ULH4 789 aa14.38□□□□□ -0.11
TIMP1-201ENST00000218388 PCDHB2Q9Y5E7 798 aa14.38□□□□□ -0.11
TIMP1-201ENST00000218388 ZBBXA8MT70 800 aa14.37□□□□□ -0.11
TIMP1-201ENST00000218388 TISP43B9A030 160 aa14.37□□□□□ -0.11
TIMP1-201ENST00000218388 C9IYK1 514 aa14.37□□□□□ -0.11
TIMP1-201ENST00000218388 H0YGN5 161 aa14.37□□□□□ -0.11
TIMP1-201ENST00000218388 ENPP3O14638 875 aa14.37□□□□□ -0.11
TIMP1-201ENST00000218388 ABLIM1O14639 778 aa14.37□□□□□ -0.11
TIMP1-201ENST00000218388 ZNF623O75123 536 aa14.37□□□□□ -0.11
TIMP1-201ENST00000218388 FGFR1OPO95684 399 aaKnown RBP14.37□□□□□ -0.11
TIMP1-201ENST00000218388 CAVIN2O95810 425 aa14.37□□□□□ -0.11
TIMP1-201ENST00000218388 EOMESO95936 686 aa14.37□□□□□ -0.11
TIMP1-201ENST00000218388 NR3C1P04150 777 aa14.37□□□□□ -0.11
TIMP1-201ENST00000218388 STAG3L1P0CL83 205 aa14.37□□□□□ -0.11
TIMP1-201ENST00000218388 YARSP54577 528 aaKnown RBP14.37□□□□□ -0.11
TIMP1-201ENST00000218388 TPD52L1Q16890 204 aaPredicted RBP14.37□□□□□ -0.11
TIMP1-201ENST00000218388 ZCWPW2Q504Y3 356 aa14.37□□□□□ -0.11
TIMP1-201ENST00000218388 TMEM240Q5SV17 173 aa14.37□□□□□ -0.11
TIMP1-201ENST00000218388 UBXN11Q5T124 520 aa14.37□□□□□ -0.11
TIMP1-201ENST00000218388 OTOP2Q7RTS6 562 aa14.37□□□□□ -0.11
TIMP1-201ENST00000218388 SLC9A9Q8IVB4 645 aa14.37□□□□□ -0.11
TIMP1-201ENST00000218388 GPD1LQ8N335 351 aa14.37□□□□□ -0.11
TIMP1-201ENST00000218388 XXYLT1Q8NBI6 393 aa14.37□□□□□ -0.11
TIMP1-201ENST00000218388 TMEM174Q8WUU8 243 aa14.37□□□□□ -0.11
TIMP1-201ENST00000218388 LINC01599Q8WXQ3 324 aa14.37□□□□□ -0.11
TIMP1-201ENST00000218388 HERVK_113Q902F9 699 aa14.37□□□□□ -0.11
TIMP1-201ENST00000218388 VWCEQ96DN2 955 aa14.37□□□□□ -0.11
TIMP1-201ENST00000218388 CBWD1Q9BRT8 395 aa14.37□□□□□ -0.11
TIMP1-201ENST00000218388 IKZF4Q9H2S9 585 aa14.37□□□□□ -0.11
TIMP1-201ENST00000218388 SEMA6BQ9H3T3 888 aa14.37□□□□□ -0.11
TIMP1-201ENST00000218388 ELAC1Q9H777 363 aaKnown RBP14.37□□□□□ -0.11
TIMP1-201ENST00000218388 UBN1Q9NPG3 1134 aa14.37□□□□□ -0.11
TIMP1-201ENST00000218388 TOPORSQ9NS56 1045 aaPredicted RBP14.37□□□□□ -0.11
TIMP1-201ENST00000218388 HSPBP1Q9NZL4 362 aa14.37□□□□□ -0.11
TIMP1-201ENST00000218388 IPPQ9Y573 584 aa14.37□□□□□ -0.11
TIMP1-201ENST00000218388 PCDHB7Q9Y5E2 793 aa14.37□□□□□ -0.11
TIMP1-201ENST00000218388 MKI67P46013 3256 aaKnown RBP14.37□□□□□ -0.11
TIMP1-201ENST00000218388 CETN3O15182 167 aa14.36□□□□□ -0.11
TIMP1-201ENST00000218388 CLIC2O15247 247 aa14.36□□□□□ -0.11
TIMP1-201ENST00000218388 HOXA2O43364 376 aa14.36□□□□□ -0.11
TIMP1-201ENST00000218388 EXTL3O43909 919 aa14.36□□□□□ -0.11
TIMP1-201ENST00000218388 EXOC3O60645 756 aa14.36□□□□□ -0.11
TIMP1-201ENST00000218388 ITGA4P13612 1032 aa14.36□□□□□ -0.11
TIMP1-201ENST00000218388 IBSPP21815 317 aaPredicted RBP14.36□□□□□ -0.11
TIMP1-201ENST00000218388 NR2F2P24468 414 aa14.36□□□□□ -0.11
TIMP1-201ENST00000218388 ADSSP30520 456 aa14.36□□□□□ -0.11
TIMP1-201ENST00000218388 GRM5P41594 1212 aa14.36□□□□□ -0.11
TIMP1-201ENST00000218388 CYP2J2P51589 502 aa14.36□□□□□ -0.11
TIMP1-201ENST00000218388 WDR5P61964 334 aaKnown RBP14.36□□□□□ -0.11
TIMP1-201ENST00000218388 FKBP3Q00688 224 aaKnown RBP14.36□□□□□ -0.11
TIMP1-201ENST00000218388 ADAM9Q13443 819 aa14.36□□□□□ -0.11
TIMP1-201ENST00000218388 ANO6Q4KMQ2 910 aa14.36□□□□□ -0.11
TIMP1-201ENST00000218388 ANKRD40Q6AI12 368 aa14.36□□□□□ -0.11
TIMP1-201ENST00000218388 C16orf59Q7L2K0 433 aa14.36□□□□□ -0.11
TIMP1-201ENST00000218388 MRPL10Q7Z7H8 261 aaKnown RBP14.36□□□□□ -0.11
TIMP1-201ENST00000218388 RTN4RL1Q86UN2 441 aaPredicted RBP14.36□□□□□ -0.11
TIMP1-201ENST00000218388 ECHDC2Q86YB7 292 aa14.36□□□□□ -0.11
TIMP1-201ENST00000218388 NPAS4Q8IUM7 802 aa14.36□□□□□ -0.11
TIMP1-201ENST00000218388 THNSL1Q8IYQ7 743 aa14.36□□□□□ -0.11
TIMP1-201ENST00000218388 NOC3LQ8WTT2 800 aaKnown RBP14.36□□□□□ -0.11
TIMP1-201ENST00000218388 RSPH1Q8WYR4 309 aa14.36□□□□□ -0.11
TIMP1-201ENST00000218388 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.36□□□□□ -0.11
TIMP1-201ENST00000218388 FUCA2Q9BTY2 467 aa14.36□□□□□ -0.11
TIMP1-201ENST00000218388 UBE2OQ9C0C9 1292 aaKnown RBP14.36□□□□□ -0.11
TIMP1-201ENST00000218388 DNAJC25Q9H1X3 360 aa14.36□□□□□ -0.11
TIMP1-201ENST00000218388 PCIF1Q9H4Z3 704 aa14.36□□□□□ -0.11
TIMP1-201ENST00000218388 TMEM161AQ9NX61 479 aa14.36□□□□□ -0.11
TIMP1-201ENST00000218388 FRMD4BQ9Y2L6 1034 aa14.36□□□□□ -0.11
TIMP1-201ENST00000218388 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.35□□□□□ -0.11
TIMP1-201ENST00000218388 TRIM49BA6NDI0 452 aa14.35□□□□□ -0.11
TIMP1-201ENST00000218388 CLTAP09496 248 aa14.35□□□□□ -0.11
TIMP1-201ENST00000218388 EPHB4P54760 987 aa14.35□□□□□ -0.11
TIMP1-201ENST00000218388 STX17P56962 302 aa14.35□□□□□ -0.11
TIMP1-201ENST00000218388 FAM189BP81408 668 aa14.35□□□□□ -0.11
TIMP1-201ENST00000218388 POU5F1Q01860 360 aaKnown RBP14.35□□□□□ -0.11
TIMP1-201ENST00000218388 TCTN1Q2MV58 587 aa14.35□□□□□ -0.11
TIMP1-201ENST00000218388 TTI2Q6NXR4 508 aa14.35□□□□□ -0.11
TIMP1-201ENST00000218388 LRSAM1Q6UWE0 723 aa14.35□□□□□ -0.11
TIMP1-201ENST00000218388 CSGALNACT2Q8N6G5 542 aa14.35□□□□□ -0.11
TIMP1-201ENST00000218388 RNF169Q8NCN4 708 aa14.35□□□□□ -0.11
TIMP1-201ENST00000218388 SMG8Q8ND04 991 aaKnown RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms